Array 1 110454-111875 **** Predicted by CRISPRDetect 2.4 *** >NZ_QLRU01000034.1 Streptococcus iniae strain QMA0150 NODE_1_length_170479_cov_66.0496_ID_893, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 110454 36 100.0 30 .................................... AAGCGGAACAGATGACAATATATGATTTTT 110520 36 100.0 30 .................................... TCGATTGGAACAGGTTTGACATTATAAACT 110586 36 100.0 30 .................................... TGCTTGGTATGCAAATGCATTAAACGGTCC 110652 36 100.0 30 .................................... ATGAAAAAATTACCGAACTGCCGGGAAAGC 110718 36 100.0 30 .................................... GGTCAGATACGCTCAAGGTCAAACAATTGT 110784 36 100.0 30 .................................... GCACTAGCAACAGACCAAGACTCGCACGGA 110850 36 100.0 30 .................................... TTTAGAGAGATAGCTTTGTTTTGTATCTTC 110916 36 100.0 30 .................................... TATGGAAAATGTTGACTTCCACGGTAAATC 110982 36 100.0 30 .................................... TTTGATACGATCTATGTCAGCGAGCATTTG 111048 36 100.0 30 .................................... GTTTTAGCTTTTTTAAATTCTTCTTGCTTC 111114 36 100.0 30 .................................... GTGGCATTTTTGGAAATAGTTAGACAATTA 111180 36 100.0 30 .................................... AGGTGTCAAACTTATCACAGCTCTTGTTCA 111246 36 100.0 30 .................................... ACAATTATTTTATGTCAGATATTGATGAAT 111312 36 100.0 30 .................................... GTGTTCGCCGAATAAGTAGAATTAAGAAGC 111378 36 97.2 30 ..........................C......... CCTGCAAAAGATTCATATGCGATTAGTTAT 111444 36 100.0 30 .................................... CAAGTCTTGCAACAACAAGTATCCACTACA 111510 36 100.0 30 .................................... ATATATATCAATGGAAATACCAAAACGTTT 111576 36 100.0 30 .................................... TTAATTCCTTGGTTGTCAGTGTAATAGATA 111642 36 100.0 30 .................................... CGGTTTAGCTGCTCTTGAGAAGATTGTATT 111708 36 100.0 30 .................................... TTAGTATTAAATATAATATCAACACCTTTA 111774 36 100.0 30 .................................... TACAACAGTACCTATAAGTGTGGCTACACC 111840 36 75.0 0 ................T.....TG..T.T.TTT..G | ========== ====== ====== ====== ==================================== ============================== ================== 22 36 98.7 30 GTTTTAGAGCTGTGTTATTTTGAATGGTCCCAAAAC # Left flank : AACCAGAAGTAAAATCAATGATCGAAAAACTTGCTGCAACTATTACCGAATTAATTGCTTATGAATGTTTAGAAAATGAGTTGGATTTAGAATTCGATGAAATCACAGTTTTAGAGCTAATTAAGGCCTTAGGTGTAAAAATTGAAACTCAAAGCGATACGTTTTTTGAAAAATGTCTGGAAATCGTACAAATATTTAAATATTTAACTAAAAAGAAGTTACTAGTTTTTATTAATAGTGGAGCATACTTTACTAGAGATGAATTTGAGAAACTGTTAGAATATATTAGTTTGTCTAGTCAACCAGTCTTATTTTTGGAATCAAGAAAGATGTATGATTTTCCTCAATATGTTTTAGATGAAGATCTTTTTATGCTAACTGAAAATATGGTATAATAGTATTAAGAAAGACAATAGTAATTAAAAGGATCATCAAGATAGAAGTCTAGCTGAGACAAATAGTGCGATTACGAAATTTTGTAGAAAAAATTTAGCTACGAG # Right flank : GGCAATATTTCCCATTTGAATAACTTACATATTCGGAAACCGCTTTCAAAAATAGTTTTTTTATGCTATACTGATAAAAAAGCTAAGTGAGGGCATTATGGAAAAAACCTTTTTTATGATTAAACCAGATGGTGTTAAGCGGGGGCTGATTGGTCAGGTTCTTGAACGTATTGAGCGTAGGGGTTTTGTGATTGAGAAGTTGGAATTGCGTCAGGCTGATGCAGCAATTCTGAGAAAACATTATGATTTTCTGGTTGATAAACCGTTTTTTCCAGAGATTGAGGCTTACATGACAAGTGGTCCTCTGTTGATTGGTGTTTTGTCAGGCAATCGTGTGGTCTCTTCCTGGCGTATGATGATGGGGGTTACAAATCCTAAAGATGCCCTGCCAGGAACAATTAGAGGAGATTTTGGGCAAGCGCCAGGAGACGATGGTGGCATTCAAAATGTGGTGCACGGTTCAGATTCTATCGACGCTGCAAGACGTGAAATTGATATCT # Questionable array : NO Score: 6.20 # Score Detail : 1:0, 2:3, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAGCTGTGTTATTTTGAATGGTCCCAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.89%AT] # Reference repeat match prediction: F [matched GTTTTAGAGCTGTGTTATTTTGAATGGTCCCAAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-0.90,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-10] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [66.7-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0 Confidence: HIGH] # Array family : II-A [Matched known repeat from this family], //