Array 1 511414-517242 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP045424.1 Pectinatus frisingensis strain MB139 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================== ================== 511414 28 100.0 33 ............................ TCACTTGGCAGATCAGGAGAGATTTTGAAGCAA 511475 28 100.0 33 ............................ CATTGTTTCCACTAACGACCTGTACGACACCGC 511536 28 100.0 33 ............................ TTGAGCAGAAAACGGATACACACGTTACGGTTG 511597 28 100.0 33 ............................ TATTCCGTTGTTTGCGATAGTTGGGAGTTGCAC 511658 28 100.0 33 ............................ TATTAGCAAGTACATTTTCTAGTCCTTCTATTT 511719 28 100.0 33 ............................ TTTGATATCGTTGTTTACGGAATTACTGTGCAG 511780 28 100.0 33 ............................ CTGGTACCATCAGAGCCTCTGCGTGCATTGAGC 511841 28 100.0 33 ............................ CAGGCTTCATTGTTTCTGATATTTTATATTCAA 511902 28 100.0 34 ............................ TACTTAAATAGTCATATAGGCGGTCAGGGGATAG 511964 28 100.0 33 ............................ CAAATTCTTCCTGTCGTATTTCTTTGAAATGCG 512025 28 100.0 33 ............................ TTATTGCAATTAGAGAAATGCTAGGTATATCGC 512086 28 100.0 33 ............................ TAAGCTATTATACTGGTATGCGTATTGGAGAAG 512147 28 100.0 33 ............................ CAAGGGATACTGTACAATGACATTGCTAATAAA 512208 28 100.0 33 ............................ CACTGGCGGCGTTGGGATTGCTTTATGCTGCGC 512269 28 100.0 33 ............................ TTATTTTCAGATTAGAAGAAGAAGTTTATCAAC 512330 28 100.0 33 ............................ CTGCTTCGATTGAATGCGGCGGTCGGCTGTCAG 512391 28 100.0 33 ............................ TAGTAGTGCTTGAAATATCAGCAGATGCACGGC 512452 28 100.0 33 ............................ TTAAAGGATAATATCTTAATGATGCTGGATAAG 512513 28 100.0 33 ............................ TAAAGCCCGTTGTTTCAACATAAGCCATTTTTA 512574 28 100.0 33 ............................ TCCGCTTATGCGCAGATTTGGTGCTTGATTCAA 512635 28 100.0 33 ............................ TGAAGCCTTAAATAATGTATATGCTATCATAAA 512696 28 100.0 33 ............................ TTTATTTTCGTTTTTTGCATAGACACCATACAT 512757 28 100.0 33 ............................ TCACCCTTACACAAAGCAACTTGGGGATATTAC 512818 28 100.0 33 ............................ TCATATTGTTTATATTTACTTTCCATTTTTTCT 512879 28 100.0 33 ............................ TCCTTGACACGGACTGCCACCTAATAATAAATC 512940 28 100.0 33 ............................ TAAATTTGAACGTGAAATTGAAGCTACAAAAGT 513001 28 100.0 33 ............................ TCCGTTACTACGACTTGGCAGTTACAAGCCCAT 513062 28 100.0 33 ............................ TACGACTGTAATTCCAACGTTGCTTGGCATCAG 513123 28 100.0 33 ............................ CGCCACTGAATTCATGGCACGCAACAAAAATAA 513184 28 100.0 33 ............................ TACTCCAGCCTTCTCTTTGTAATTCTGTGTGAT 513245 28 100.0 34 ............................ ATAGACCTAAGCTCATAAAGCAATTAAAAGAAAT 513307 28 100.0 33 ............................ TTGACTTAGACAAATACAACTATTCAGCGATAA 513368 28 100.0 33 ............................ ATGGTGACACGAATGAAATGTTGGACGGTACAT 513429 28 100.0 33 ............................ TTGTCCGTGTATCCTTATCTCCTTTTTATTATC 513490 28 100.0 34 ............................ TCGGCTTTGGAATCCTCAAAAACACCCCTGTTTG 513552 28 100.0 33 ............................ TCAGGGTACCCTAGTCTTGTAACCAGACGTTTC 513613 28 100.0 33 ............................ CTATGATAAACTTTAATATTAAAAAGGAGTCTT 513674 28 100.0 33 ............................ CAAGGCGTCTGATCGCAGTTCCCATTCTTTGTT 513735 28 100.0 33 ............................ TATAAATGTGCCATTGCTAAACTCGACATGATT 513796 28 100.0 33 ............................ TTTGCTTATCAAAGAATCGACTGAGCTTGATGG 513857 28 100.0 33 ............................ CCGGCAGTAAATGACGACAAGGCGGCAATAAAA 513918 28 100.0 33 ............................ TGGACCGTCGGCATGGTTCCGTCCTTATAATCA 513979 28 100.0 33 ............................ TCCTCTTGATAAGCATAAGATCGCTTTTGATAA 514040 28 100.0 33 ............................ TTTCGCGTTCAAACAAATTTGAGCTTGGAATTG 514101 28 100.0 33 ............................ TCATCCGAGCTTGATGGTGCAGTTATTCAGGAG 514162 28 100.0 33 ............................ CACCTATGTGATTTTTAATTTTTGTCAGGAAAA 514223 28 100.0 33 ............................ TAGACATTGAAACATACAGCGATCTAGACATAA 514284 28 100.0 33 ............................ CGCAGAAGTGATCGACTGGGCTGAAAAAGCGAA 514345 28 100.0 33 ............................ TTAACTCACTTTCTTTCATCAGATAATAAATTT 514406 28 100.0 33 ............................ TTTAAAGCACTTGTAGATGCTATTGTAGCAGAA 514467 28 100.0 34 ............................ ATTATGAATGTATAACGACAAATATTCATATATT 514529 28 100.0 33 ............................ TCCATTTTTGTAAATATTGATTGTAGTGATACA 514590 28 100.0 33 ............................ TTATGCCCCCATGGGAATAATCTAATCTGTTGC 514651 28 100.0 33 ............................ TTTCCCCCTCGGCATGCTGTTAAGGTGGCTGAT 514712 28 100.0 33 ............................ CAGTTTCAACGATAGTTACTTTTAGATCTAAAG 514773 28 100.0 33 ............................ CACTTATTTTAATATATTTTACCATCTGCTGTA 514834 28 100.0 33 ............................ CAGTTCTCAGTAAATTTCACACGACGGAATTAA 514895 28 100.0 33 ............................ AGTAAACCACTCAGGTCGCACCTGAAAGCCTTG 514956 28 100.0 33 ............................ TTTGTTATTAAAGCGTCCTTTGCCCATTGATAA 515017 28 100.0 33 ............................ TTACTGCATGAAAAGCTCAGATATTAGGTTCAT 515078 28 100.0 33 ............................ CTAATAGAAGCACAATAAGGCTTTAAACTAGTT 515139 28 100.0 33 ............................ CATGCTTGAATACCTCGATACACAGAAAGAAAA 515200 28 100.0 33 ............................ TTAAATGAGCAGCAAAAGCTATTCTGTATATAC 515261 28 100.0 33 ............................ TGAGTGTGCGTGCAACGGGTGTTTCTGATAGAT 515322 28 100.0 33 ............................ CTTATTACAATATTGGTGAAAGCATTTGATATT 515383 28 100.0 33 ............................ CATTTTAATTTCTCCTTTTTTTAAGAGGCGGCC 515444 28 100.0 33 ............................ CAAGGTATGTGCTGTCTGCGGCAAACCTGCCCA 515505 28 100.0 33 ............................ TGTGACAGTGGTAAGAAAATGTCTAAAAATAAG 515566 28 100.0 33 ............................ CTATTTTCCATGAGCCGGCATTAAATTGTTGTC 515627 28 100.0 33 ............................ TTAATAATACAAGCCCCTTATAAAAATATTGAG 515688 28 100.0 33 ............................ TGATTGTGGATTTATAAATCCTGAAACTACCAA 515749 28 100.0 33 ............................ TCAACATATACTTACCTTCGTTAATACAATATA 515810 28 100.0 33 ............................ TCCAGACTAGTTCCCATATAGGCAATTCCATCC 515871 28 100.0 33 ............................ CATAAAGCCCATCTCCTTTTCATTTTATATAGG 515932 28 100.0 33 ............................ TCAAGGTAAAATTTCTAGATCAGAGTTAAAATA 515993 28 100.0 33 ............................ TTATATTTCTGCGGCGAACTTGGCAGTGTCAAA 516054 28 100.0 33 ............................ TGATGTAATTGACAACAATGTATGGCTGCATAT 516115 28 100.0 33 ............................ CATAGAATGCCCGTTTAGCGAATCCGTGTACAT 516176 28 100.0 33 ............................ TACTTTAGCTGATTTTTGTGGATTTACTAGCAC 516237 28 100.0 33 ............................ TTATTTTTTTTAAGCCTGACGCCTACAACAAAA 516298 28 100.0 33 ............................ CATGGACTACAGAGGACGCTGCTACCCAATTCC 516359 28 100.0 33 ............................ TAATTTTGTTGCACCGTCTGATGCGTTATTCGG 516420 28 100.0 33 ............................ CTTGTAACAGTATTTTCTGAGTTTAAGCGTGTG 516481 28 100.0 33 ............................ TTCAACAGCTAACAACGGTACCGGCGTTTACGG 516542 28 100.0 33 ............................ CATGCCTGCCGGACTATGTGCCGATCTGGAGCG 516603 28 100.0 33 ............................ CTGCAATATAAGCTCGAAGGATATTACGAGAAA 516664 28 100.0 33 ............................ CAGTAATCTGCCCGTCAAGCATGAGCTTATACA 516725 28 100.0 34 ............................ ATTGATGCAGCAGCTCCGCCAATACCACCGTAAG 516787 28 100.0 33 ............................ TTATCTGCAATGTATTGCCCTTATCATCAATAC 516848 28 100.0 33 ............................ TTATCTGCAATGTATTGCCCTTATCATCAATAC 516909 28 100.0 33 ............................ CCTGCTGATTAAGAGTACGACGTTTCTAAGACC 516970 28 100.0 34 ............................ TCATTGTAATAACTATATTGTGCGTATATACCGA 517032 28 100.0 33 ............................ TCTACTGCTGCGCAATTAAAAGATGCTATAGCC 517093 28 100.0 33 ............................ CACGTTTCACTAAATCCGGTATCCTAGAATAGC 517154 28 100.0 33 ............................ CCAAGCATCCTGAATTAAAGCATAAAATATGGC 517215 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================== ================== 96 28 100.0 33 ATAGTCCCCGCGCAAGCGGGGGTGATTC # Left flank : CTGTTAAAATATGCCAAGGTCATATTCAAGCAGAATTTTCTAAATTGATAAATATCGGAGAGACATTGCCGGTAATAATTGAAGAAATGACCGGAATAAATTCTAAGGAATTGGTTACTAAAGGTGAAGATTTATCATATGTATTAGATGATTTCATTGATTTTGTTGGTGATAATGTGTTAATAGCACATCATTCTGACTTTGATAAAAACTTTTTAGAAGAGGCACTGAAAAAAGAAAGAATGCATTTGCAGACAACTTATTTTGATACCGTCATGCTTGCTGAAGCTGTGCTTCCGCAATTAGTATCATATAAATTGGGTAACTTGCTTAAGTTTCTTAATATTGATAGTAAAATAAAACATCGTGCGTTAAATGATGCACGAAACGTATATTTACTTTATGAGGCGTTGAAGAAAATTAGTACTGCATCTGCTAAGAAGTAATAAAAAAAATAAGGAATTAATAAAAGCACTAAGTACTTATCAGCATTTTTTGCT # Right flank : CCAACGCATAATCATCATCGGATAATTTAGAGAAGAGTACCTGAAATTTAAAAGGAGAAGTGTATAGAATGGAATTGATAACAATAGATCAAGAAAAATGTATTCAATGCGGGGCCTGCGTTAAAGAATGTCCATCATTTGTTTTAAGTATGGGGTGAACCGGTCCGGAGGTAGCAGCGCCCCAATCCTGCATTGCTTGTGGTCATTGTGTTGCCATATGTCCACAGGCAGCAATTGATTATAAAAAAACACCATTGTCTAAACAACTGGAATTAGCTGATTATCCCCAATTGAATGCGAAAGAATCGGAGTTATTTTTGCGGTCCCACCGTTCAATTCGCAGTTATTTAGAAAAAGCAGTTCCAAGAGAAGAATTGGTTAAACTTGTTAATATAGCTCGATTTGCACCAACAGCAAGTAATTCACAAAGCATATCATATGTAATTATTGATGACAGGAAAATATTGGATGCGTCAGTTGAAATAGTAATTGATAAATTG # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATAGTCCCCGCGCAAGCGGGGGTGATTC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [5,5] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-13.80,-12.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [78.3-66.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.64,0 Confidence: HIGH] # Array family : NA // Array 2 2335201-2323304 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP045424.1 Pectinatus frisingensis strain MB139 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ====================================== ================== 2335200 33 100.0 35 ................................. CACGCAATGATAACGATTTTGTGATCGCACAGACA 2335132 33 100.0 34 ................................. CGCTCACAAGGCAGGAGTTAAACAAGATTCACAA 2335065 33 100.0 34 ................................. TGCACTGCGTCTGGATCATCTGAGCTTATGCCAC 2334998 33 100.0 35 ................................. ATAATAAGCATTAGCAGCATCTATATCCTGCTGCA 2334930 33 100.0 35 ................................. ACTGATATAGGCGTTGAGGAATCCAAAGTACTAAA 2334862 33 100.0 35 ................................. ATTTTGCGCCCAATACAAAAGGATTTTTATTTTGG 2334794 33 100.0 35 ................................. GGGTATAGGCGGTATCGATCTTGCGGCATCATGGG 2334726 33 100.0 35 ................................. CGCTCACAAGGCAGGAGTTAAATAAGATTCATAAA 2334658 33 100.0 34 ................................. CATTCAACAGCTGCTTGCTTTTATCCAACAGGCA 2334591 33 100.0 35 ................................. AACCTCTGTTAGTAACGGTGAGTCCTCAATATCAG 2334523 33 100.0 34 ................................. CCAGACGATATTTGCCTGGTCCTGTTTTGTTGCC 2334456 33 100.0 35 ................................. TCTGACACTTTTACCGGCAAACCCATTACTGCCTA 2334388 33 100.0 34 ................................. GATGATCGCTTTATAGTCTGTCTTTATGCCGTAT 2334321 33 100.0 35 ................................. CCAAATGTGTGCATAGGATAAGCGGACGTTCTGTA 2334253 33 100.0 35 ................................. CTGTAATAATTGAGAAAAATTAACATTATTTTCTT 2334185 33 100.0 34 ................................. ACCTCGGTTGTTTCGATGGTCTCGACGGTACTCG 2334118 33 100.0 34 ................................. AGCTACTACTAAAAAATGCCGCTGCGATAGAGCT 2334051 33 100.0 34 ................................. ATGAGTGATAAGACAGCCCACGCTTTTAGTTACC 2333984 33 100.0 35 ................................. ATTTTTTAATTCCATATCCCGATAATCTGCTTCAC 2333916 33 100.0 35 ................................. CTCTATATATGCATGCTGTTGTCGTGGGATACATT 2333848 33 100.0 34 ................................. ATTTTCAATATCATCATGGACTTCTGTGTACTCA 2333781 33 100.0 34 ................................. GGCTGCATCGTGCTGAGTGTCAAAAGGTGTTATA 2333714 33 100.0 35 ................................. TCGATGGGGACAGTGGAAGCATGATAACTGATAGT 2333646 33 100.0 34 ................................. ATTTGCATCTTTAAAAGGGAGTTTAGCTACTTTA 2333579 33 100.0 34 ................................. ATCACTAAGGTCTTGAGGGCGCTCAAAGGTTTTC 2333512 33 100.0 34 ................................. CTGATTTCACAAATCCGGTAATAGCTGCGAGGGC 2333445 33 100.0 35 ................................. CTGCAAAAACATGTAATTCGTAGTGAATTTACAAA 2333377 33 100.0 35 ................................. TCTTAAGGAAACGACAAAGATTAACTTTATACCCG 2333309 33 100.0 35 ................................. AGTTATCTGAATTTGTATCTGTTTCATACGTTCAG 2333241 33 100.0 34 ................................. TACTGTATATTTGGCATTGCCCAATGCATAACCA 2333174 33 100.0 35 ................................. TGGCATTTATGGCTGTACTGGCATGTTGTTAAGGG 2333106 33 100.0 35 ................................. GCTTATGCAAAGACAATTTAATACTACTAGATGAA 2333038 33 100.0 35 ................................. TGTAACTGGATGTACACTAACAAAATAGTGCTCTG 2332970 33 100.0 34 ................................. TATTATGCATATCATATCACTTGTTGTATTTACA 2332903 33 100.0 34 ................................. TATTATGCATATCATATCACTTGTTGTATTTACA 2332836 33 100.0 35 ................................. CCCTCCGATATTTGCCATAATGCCAGTTATCTGAG 2332768 33 100.0 34 ................................. TCTTAAGGAAACAACAAAGATCAACCTTGTACCT 2332701 33 100.0 35 ................................. CATGAACAGTCTGCATCAAGTATCTTTTTGGCGCC 2332633 33 100.0 36 ................................. AGTTATCTGAATGAACCTTAAAGTATCTGAATGGAC 2332564 33 100.0 35 ................................. ATCATTTAATAGAGCTGAAAAGTGCTGTAAGCCAC 2332496 33 100.0 35 ................................. AACCTGCTGAGTGCTTCTTTTAGGGGCTTTTCCTG 2332428 33 100.0 36 ................................. CTCATTAAACAGCTGCTAAAGCTAACGCAACTGACC 2332359 33 100.0 35 ................................. TCTGCGTTCTGCCCGAAAATTTGCAAAACAATTAT 2332291 33 100.0 35 ................................. TTTGTATCATCATCAAGTGAATTATAGCGTGCATA 2332223 33 100.0 35 ................................. TCATTGACATATCCGGCTGATTATCTGTATTCATT 2332155 33 100.0 35 ................................. TTTAAGATATCTTTGTTTGAATCGGATATAACTTT 2332087 33 100.0 36 ................................. CATGAACAGTCTGCATCAAGTATCTTTTTGGCGCCT 2332018 33 100.0 35 ................................. ATTTGCATCTTTAAAAGGGAGCTTAGCTACTTTAA 2331950 33 100.0 35 ................................. GTAATTATGTTTGAATACTTCTACTGCTGACTTAC 2331882 33 100.0 35 ................................. CAGTTATTTTAACTTCAATAAATCTCATTATTATA 2331814 33 100.0 34 ................................. ATTCGTCAACTTTGTGTATCAGGTGGCGAGTAAC 2331747 33 100.0 34 ................................. TTCAAGCCCCGAACGAAAGCTTGAAGATGGTCTA 2331680 33 100.0 33 ................................. CCTGCTGAGTGCTTCTTTTAGGGGCTTTTCCTG 2331614 33 100.0 34 ................................. GTGTTTCAAAACGCTTCTAATCGCATCTATAAGG 2331547 33 100.0 35 ................................. GTAACGTCTCGACCAAATAACATCATTTTGTCGTA 2331479 33 100.0 35 ................................. GTTGCTGCACAGGTAAACCATTTGGTGTTATCCAA 2331411 33 100.0 34 ................................. CACTTGTTGATTTCAGCTATCTGTTTGCCAATTG 2331344 33 100.0 35 ................................. AACATCCTGTTGACAATACTTACCCATTTCAGATG 2331276 33 100.0 35 ................................. CAATTTGACGCCCATATGGAGGGTTCATCCAGCAA 2331208 33 100.0 35 ................................. AGATAAACAATTTAAATAATCATGTCGAGTTTAGC 2331140 33 100.0 34 ................................. ATTTTATGATAATATATGAATATTGAAATACTAA 2331073 33 100.0 34 ................................. TTCAAGCCCCGAACGAAAGCTTGAAGATGGTCTA 2331006 33 100.0 35 ................................. TTCAGGATCATCTGCTTGCTGATTGCGCTCAAAAC 2330938 33 100.0 34 ................................. GTACGAAACGGTACCATTGCCTACTTTACGGAGG 2330871 33 100.0 34 ................................. CGGTACTTTATGAATCTTTAAGATAGCTAATCTC 2330804 33 100.0 34 ................................. AACTTTGATGCGGAAAAATCCGATGTATCCACGC 2330737 33 100.0 35 ................................. AATACTGGTTTCCTGCAAGGTTCCCAGCCTGCGCG 2330669 33 100.0 35 ................................. TTGCTCCTGCAGCCAATCTATTTCCGGCATTTCAA 2330601 33 100.0 34 ................................. AAACAAGTGCTGTCCGAAAAAAACTGGTTGAGAC 2330534 33 100.0 34 ................................. CTGTAAAAGTATAGGTAACATCAGCATCATAAAA 2330467 33 100.0 34 ................................. TTTCAGCTACTAAAGGTGTATCTCCGGATACGGC 2330400 33 100.0 35 ................................. GTTTGTGTTGCTAAAGTCCTGCCGGATAAACTGTC 2330332 33 100.0 35 ................................. AATGATGATCTGCGCTGTCGATATATTTTTACTAA 2330264 33 100.0 34 ................................. CAAAAATAATCACCTGCCTTGTGATATACTCCTA 2330197 33 100.0 34 ................................. ATCCAAACCTTCTAGTTTTTGGACTTCAGCCATG 2330130 33 97.0 34 ..............................G.. TGACGTGTCAGCATTATTGGTATCTGCTGATATA 2330063 33 100.0 34 ................................. CTATGCCGTCAAGCTGTACGCCCTCACCGGTGTC 2329996 33 100.0 35 ................................. GCTCACAGATGGATAATATTAAATAATCTGCCTTG 2329928 33 100.0 35 ................................. ATCATCGCCCCGATCTGTGTCGCCATCGCGAACAG 2329860 33 100.0 35 ................................. CCGATGAACAAAAGCAATGAAGGTGTTTGCCCAAT 2329792 33 100.0 35 ................................. GACAAAATCATTTCTCCAACGTAATGCGCAAATGT 2329724 33 100.0 35 ................................. ACCACTTGAAAGCATCACGAAAAACACCTACGCAC 2329656 33 100.0 35 ................................. GGCCTGACGGGTATTAGCCTGTGCAATAACTTTCT 2329588 33 100.0 35 ................................. CTTGAAATTAAGGCTTACATATATCAGTGTGACTC 2329520 33 100.0 36 ................................. ATATCGCTCTGAAATCCAGAAAATAAAGGCTGCTAT 2329451 33 100.0 36 ................................. ATCAGAATTTGGTGAAGGCGTTTTGTGTTTCAGAAA 2329382 33 100.0 34 ................................. ACAACAAGAAATGGCAGAAACATTGGGATTTAAA 2329315 33 100.0 35 ................................. ATTTTATCACCTCGATAACAGCAGCGTTTTCAGAT 2329247 33 100.0 35 ................................. GGTCAGATCGCAAGGCATGATATCTTCAAGGTCAG 2329179 33 100.0 35 ................................. AGATATAAGATTTATAAAAGGCCGTTTGAAATTCA 2329111 33 100.0 35 ................................. CATAAAGCATTTTTGAAGTTTACGTACACTTGCAT 2329043 33 100.0 35 ................................. GTTGCTGCACAGGTAAACCATTCGGTGTTATCCAA 2328975 33 100.0 34 ................................. TTTTATTTTGGCCGACAGCTGTATTAATAGCCTT 2328908 33 100.0 35 ................................. TTAAGCATAGAATATGTAAGTGAACGAACGATTAT 2328840 33 100.0 34 ................................. TTCATGATTGATAATTGTTAAAATGTTATCTTCA 2328773 33 100.0 36 ................................. CTGGTACGGCCTTAGCTCCATTAAAATTTACCGGCC 2328704 33 100.0 34 ................................. TAGCTGCAGCTGATACACCGTCAAGCACTTTTTG 2328637 33 100.0 34 ................................. CAGCTATCAAAGGTAAGGACAGTGTCAATTTTGG 2328570 33 100.0 35 ................................. ATGACCTTCAGGACTGACACAAAAGAGCATAAAGA 2328502 33 100.0 35 ................................. CGATTTTTGATAAAAATGAATCAGTTGTTTATCAA 2328434 33 100.0 34 ................................. CACCGGTGAACGAATTGAAGGCCCATTGGTTACA 2328367 33 100.0 36 ................................. AGCTTGGCACATTTGTTATAACACCTTTTGACACAC 2328298 33 100.0 34 ................................. TTGCTGAAGATTGGCAGATTATATAAGCGGCTAC 2328231 33 100.0 36 ................................. TAATACTGGTCACAGGTATTGGATACGCACTACCTG 2328162 33 100.0 34 ................................. AAACGGATACAGACGAGCGCATCAACATGAAGGG 2328095 33 100.0 34 ................................. GCTCCAATTCCGTCACCGCCTGCTTGCGGATATT 2328028 33 100.0 35 ................................. ATATTTGACTTTAATACCTGTGCAGAATAATCTTT 2327960 33 100.0 34 ................................. TCCACGCGGATATATACCGCATACTGACTGAGCA 2327893 33 100.0 34 ................................. TGATTGAATGTCATAACCTGCATCTCTTACTACA 2327826 33 100.0 35 ................................. ACCATATAATTGCCCGTCTTTCAGGCTATAATAGG 2327758 33 100.0 34 ................................. TCTGTTAGAGAAAAGCCCAGTATCCGAACAAATT 2327691 33 100.0 35 ................................. GCCACCAGAAAACGAGTTTTGTATTGTCCTGTAAA 2327623 33 100.0 34 ................................. ACCAGCGTCTATATCAGTATCTCCATAGAAAATC 2327556 33 100.0 34 ................................. GCAGATAAAGATGTTATTGGTTTGTTGCAGTCTA 2327489 33 100.0 36 ................................. CAACATCGTCTAAGCCAGCAAACATAATTTGATAGC 2327420 33 100.0 34 ................................. GCAGATAAAGATGTTATTGGTTTGTTGCAGTCTA 2327353 33 100.0 36 ................................. CAACATCGTCTAAGCCAGCAAACATAATTTGATAGC 2327284 33 100.0 35 ................................. CAGCTATCAAAGGTAAGGACAGTGTCAATTTTGGT 2327216 33 100.0 35 ................................. TTCAAACGTAATTGTAGTATCATCCACTACCACAT 2327148 33 100.0 37 ................................. CCTCTAGATTTTGTAAAACAGAGTAATCTATTGTGTA 2327078 33 100.0 35 ................................. TGCCAGAACTGAGCTTGGACTTCCCACGGCGCATC 2327010 33 100.0 34 ................................. CACTTTTGCAGTAAATTGCTCAAAAAAGAACCAA 2326943 33 100.0 35 ................................. AGCTTGCGTTTGCGTTTCAGTCGTAACGGTTTTAG 2326875 33 100.0 34 ................................. TTACTCGGTACAAAATACGGTGGTAAATTATATG 2326808 33 100.0 35 ................................. CACTTATGACACCCCCTCTCACTGCATCTGCCTTG 2326740 33 100.0 35 ................................. CATAAATTCACCACCTAAAAAGAAAAGGCAGGATT 2326672 33 100.0 35 ................................. CTTTCGAGCAAATCCGCTTGGTTAAATCCTTTGAA 2326604 33 100.0 35 ................................. ATCATTGATGAACGGAGTGTACACATCATTAAATA 2326536 33 100.0 34 ................................. TATGAATACCTGTCCTGCGAACACGTCCCAACTC 2326469 33 100.0 34 ................................. CAATATTAGCAGCTACTGGTGTCGCTAATTTGAC 2326402 33 100.0 35 ................................. AGTAGCATCACCATTAACTATCTTTCCTATCTTAG 2326334 33 100.0 35 ................................. AAAGTATTTAGTCAGCCAGTCCATTGCCTTAGTGC 2326266 33 100.0 34 ................................. TTGCTCTGCCACAGGTTATTTACTACCTGCGGAC 2326199 33 100.0 38 ................................. TTTGACGCTGACATCAATAAAATCGGACATATCAGAAA 2326128 33 100.0 35 ................................. TGCTACTTCCCAAATTTGGTTTGAAATAGCTGAAG 2326060 33 100.0 36 ................................. ACGAACATGCTGGAATATAAGCTGGCTTGGCAAGGC 2325991 33 100.0 36 ................................. AAATAATGGTGCTGCAATGACACCTCTTAGTACTAC 2325922 33 100.0 34 ................................. CTGACCAGTTTAAAGGTGATCAGCATGTAGGTGA 2325855 33 100.0 36 ................................. TTTGTTGATCTATTCCGGATGCTTGAAGGACTGCAA 2325786 33 100.0 34 ................................. ATTTGATATTAATGATGCCAACAATGCTACACCT 2325719 33 100.0 36 ................................. ATGAATAAGGATGACGGGCGGTTATCAACTGATGAA 2325650 33 100.0 35 ................................. CGATCATAAAGAATTTAAAGCACTTGTAGATGCTA 2325582 33 97.0 35 A................................ AATGAGCATGTAATCTAAATCAGGAAAAGTGTATT 2325514 33 100.0 35 ................................. CTCCGTTTGTGTTTGACTTATGACATCATAATTTT 2325446 33 100.0 36 ................................. GCCATGTATACGGGAAGATTGCTTTGGACCCGCAAA 2325377 33 100.0 35 ................................. ATGCTGTACACGTGTAAGAACAGGCCCTAACTGAC 2325309 33 100.0 35 ................................. TTCAAGATTCCGTGCAGATCAAAAGCTGTCGGTGT 2325241 33 100.0 34 ................................. AGCCGCGGCATATTTAGGTTTACGCTTATTTATT 2325174 33 100.0 35 ................................. TATTCGGTTTTGCGTTTAATGATGATCCGGTCGAA 2325106 33 100.0 36 ................................. TGCTTGCTAAAAATGGTAATACCATAATTCGCTTAA 2325037 33 100.0 36 ................................. CACACAAGTGTGGAAAATGGTTCAGACGCTGTGCCA 2324968 33 100.0 36 ................................. TGCTTGCTAAAAATGGTAATACCATAATTCGCTTAA 2324899 33 100.0 36 ................................. CACACAAGTGTGGAAAATGGTTCAGACGCTGTGCCA 2324830 33 100.0 35 ................................. GCTTAAAACAGGCTATCACCGAAGTTGATACTGCA 2324762 33 100.0 34 ................................. ATGTTTAGCCATTGATCCATAAAGCTTTTATGAC 2324695 33 100.0 35 ................................. ATCAGACAAGCATATACATACTTATTGATGTCCTC 2324627 33 100.0 34 ................................. TATTACAAATGGCGAATCCTCTGTATCCGTAAAT 2324560 33 100.0 35 ................................. ATGGAACCAGCGTGTATCAGTGCGTGATGGTAATA 2324492 33 100.0 35 ................................. CTAAATGCAAAAATCCAGAAAGCGTATCTTCTGCC 2324424 33 100.0 35 ................................. AAATGACATCAGGTTTAATAGTAATATTTGCTGCA 2324356 33 100.0 35 ................................. TTTTTCGCTCGGTATTGATAGGGGGTTAAAGTTAA 2324288 33 100.0 34 ................................. GACCAGCGCCGGGGCAATCGTGTATGATAACAAA 2324221 33 100.0 35 ................................. TGACAGCCTTACAACCTTATCGGGAAAGGATGCTA 2324153 33 100.0 35 ................................. GTCATACATAGCAGCCTTTATTTTCTGGATTTCAG 2324085 33 100.0 35 ................................. CAATAGTTATATATTATTGACCAATTATCAGCGTC 2324017 33 100.0 35 ................................. ATTTTATCCTCCGTAGCTGTTGGCCGAGTCACCTA 2323949 33 100.0 36 ................................. ATCATAACTTTTGCCAAATGTGATCTTGTGCCCATC 2323880 33 100.0 34 ................................. TTTCGGCGATAATGTATTTAAAGTTGGCATGACC 2323813 33 100.0 35 ................................. TCAATTTAGCGCATCCAGTATTGGCTTTAGTTTAG 2323745 33 100.0 35 ................................. TCAATTTAGCGCATCCAGTATTGGCTTTAGTTTAG 2323677 33 100.0 35 ................................. TCAATTTAGCGCATCCAGTATTGGCTTTAGTTTAG 2323609 33 100.0 35 ................................. TTGCATTGACACGTATTATAACACGTGTTATAATA 2323541 33 100.0 36 ................................. ATTTATAGGAGTACTTCAAAATGATATTTTATATGC 2323472 33 100.0 34 ................................. TTTGTAAAACTCATTACTGTTATCATAGAAATTA 2323405 33 93.9 36 ............................A...T CTTTGTTTCCATTTTGATTACCTCTTTTTAGTTTAT 2323336 33 84.8 0 ...........T.............G.G..CT. | ========== ====== ====== ====== ================================= ====================================== ================== 176 33 99.8 35 GTCGCTCTCCGCATGGAGAGCGTGAATTGAAGC # Left flank : TCCACCATTTTTTTGGAAATGACATGTCTATTAAAAAAATAAAAAGGAATTAGTTATGTATATACTTGTGTCATATGATATTAATACTATAGATTCTGATGGTAAACGGCGTCTCAGAAAAGCAGCAAAAATTTGTCTGAATTATGGACAGCGTGTTCAAAATTCTGTATTTGAATGTAAAGTGGATGAAGGACAATATCTTTTGTTAAAACATCAGCTATATGAGATAATAAATGAAACCGTTGATAATTTAAGATTTTATCGATTAGGGAAAAATTATAAAAAAAATATTGAAAGCATGGGGTTGAATAAAGCTTTTGATATTGAGGGTTCACTTATTTTATAGTGCGAGTAGGAAGTACTGGATAATTTCTCCTGCTTTCGCACTATAAATAGGATAATTTGCCAATAATAGGTATAATAAATTTGGTTATTTTGTATAAAAATTTTTAAAGTACTATATTTGCTATATGTGATATTAAAAAATACTATATGTAGCG # Right flank : TCTCGTAAAATAGCCATATTCAATGCTTAGGTTGCTAATTTTGTTGTTGGTCGATTTCCAATACCCAGCCTACCAGTTTCCTTCTTGCAAAATCTAATGCCGTTACCAAATAACACCATTTGTTGCCAACTTTAATATAAGTAAGCTCTGCAAGCCATATGGTATTAAAATCGATCACATCAAATTTGGGGTTTAGAAGATTGGAAAACACTTGTTCTGGATTTTTTTTTGTATAAAAGAAAACCACGCGATAGTCGCGTGGTTAAAAAAAGCTTAAGCGGTGAGCCCTAATGTGCTAACCTGTAAATAAGCCTGCCAGCTTAAAATACAGATTATACATTAGGAGATGCCACTAAATGTCGAAACAACAAAATAATGACACACATAGTTTAGCACATAGTGTGTCCTGAATGTAAGAAAAGCAAACGTAACAATAATTCTTGCAATGCTTTTTATAAGATGGAAGTAGGTCTTCCGTAATCAATAAGCAGGTATTGATT # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCTCTCCGCATGGAGAGCGTGAATTGAAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [7,7] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCTCTCCTCACGGAGAGCGTGGATTGAAAT with 91% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-6.30,-6.40] Score: 0/0.37 # Array degeneracy analysis prediction: R [8-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [65.0-81.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.18 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //