Array 1 8662-9487 **** Predicted by CRISPRDetect 2.4 *** >NZ_NVNC01000043.1 Bacillus cereus strain AFS091626 AFS091626_109_C3_Contig43_140523, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 8662 32 100.0 35 ................................ CAGAAAGCAAGACTCTACTTCGATACAATCTACGG 8729 32 100.0 35 ................................ TTTTGTTGCGCCTAAGTCTTTCCAAGGTCCTTTTA 8796 32 96.9 33 ...........A.................... CTTAGAACCTATAAAAGAACAACCTTCTACCAA 8861 32 93.8 34 .........C...A.................. TCAGAACCTTTTTTAATAATGTAAATAAAGATCA 8927 32 93.8 34 .........C...A.................. ATTTGGTAGCGCATTGTTTATGGATGCACGATTT 8993 32 93.8 36 .......T.......A................ ACAATTCCTCGTGGTATGAACCCTGAAGATGTTAAA 9061 32 93.8 33 .........C.........T............ ATGCCAATCGGTGTCCAAGCCGACTTCATTAAC 9126 32 93.8 34 A..........A.................... CCCTGCTGATGCAACATCGCTACCTGCATTTTGT 9192 32 93.8 34 .........C..........A........... GAAAAAACGCTTGATGACTTAATGCGAGATGAAG 9258 32 93.8 34 ..A........A.................... GATGATACAGAAAAAATAGTACCAACAATCCGAC 9324 32 96.9 34 .........C...................... GAATACGATTATCAAGATGAAAGCACAAAAAAAG 9390 32 93.8 34 .........C.........T............ TACCTCGGGTTTATATTTATCTGGAACGCTCATA 9456 32 96.9 0 ..............G................. | ========== ====== ====== ====== ================================ ==================================== ================== 13 32 95.5 34 GTCGCACCTTATATAGGTGCGTGGATTGAAAT # Left flank : TATCTAGTTATATATTAAAAGTTGAACACAAATAAAGAGAAGAATAATTAAAGTATTTTTGAGTTAGCAAAATAAAGGAATTTTTAGTATTCAATATTCTTAAGAATGTTATATCATAAAAAAAGATCAAACGATGATATAAAGAATAAACTTGATAGGTAGATAGAGAGACAATATATAGTGAATTTTATTGTAAATTACGACTCAATATATTAAGGGTATTATGAAGCTATACATTTTTGTTAATTAGTTAGTTAATAACTATGAAAATAAGGTCGAATATATTGATATAAAAGAATGAGTTGATTTAGAAAACCTTTAATTTTTTAGGTGCGAATGTATAGCAAACATAAAATTCCTAATACATTCGCACCTAGAATTCTCATGCTTTATGATGGGAATTTATGATTTTTTATACAAATTAGTTTATTAAATAAAAACATTTTTATATTTTTGGATAAAACTAACGTATTTGTGGTTGATTTCGAACACAAATCGGT # Right flank : TAGTTTAGTAGATACTCAACTGGAAGTATCTACATCTGCAGTATCTAACAAACATGTAAAAAATATAAAATGGAGGGAGATTGAATGACCTACATTGCTCATATACGCGAGAGTGACAGTCAAGTACAAACAGTCGAAGAGCATTTATTAGGAGTAAAAGAACTAGCTGAAACCTATGGAGAAAAAATTGGTATAAAACATTTAGCTGGTTTAGCAGGTATGCTCCATGATATGGGTAAATACACCAATGAGTTTAAAGAATATATATTGGAAGCAGTAAATAATCCTAATTCTCCACCTAAAAGGGGGAGTGTTGACCATTCAACTGCAGGGGGGAAATTGTTATATCAATTATTCCATACAGAAAATATGATTCCTTACAAAGGGATAATATCTGAGATAGTGGGAAATGCCATTATATCTCACCACGGATACCTTCAAGATTTTTTAAATCCAGATTTAGAATCGCCCTATTTAAATAGAGTACGAGATAAGCAATT # Questionable array : NO Score: 8.30 # Score Detail : 1:0, 2:3, 3:3, 4:0.78, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.26, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACCTTATATAGGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:56.25%AT] # Reference repeat match prediction: F [matched GTCGCACCTTATATAGGTGCGTGGATTGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-3.10,-2.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-10] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [71.7-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.78,0 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 2 17818-18906 **** Predicted by CRISPRDetect 2.4 *** >NZ_NVNC01000043.1 Bacillus cereus strain AFS091626 AFS091626_109_C3_Contig43_140523, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ =================================== ================== 17818 32 100.0 35 ................................ GAGATAACAAAGTATCTGTAACTGAAAAAGGAAAA 17885 32 100.0 34 ................................ TATCCAAGTGCGTTAAATTTCCAACCATTTGGAG 17951 32 100.0 33 ................................ TAAGCCACCAAAACCGATTGTGATGGCTGAGAA 18016 32 100.0 34 ................................ GTTACTTTCTCTTTCCGTTTGTGGTAATGGGAAT 18082 32 100.0 34 ................................ TCGTTCTTTAGATAGTGGTGGTACTTCTGTAACT 18148 32 100.0 33 ................................ AATACCTTTTGATTCTTGATTCCCAGTAGGTGA 18213 32 100.0 35 ................................ AGACCATCGATGTCTCAATTATTCGGTAATTTCAA 18280 32 100.0 34 ................................ TCTAAGGAACAAGCAGGACAAATCGTAGAGGAAG 18346 32 100.0 34 ................................ TCTATATTCTCCGCATTGACAATAGTCGATCTTC 18412 32 100.0 35 ................................ TACAGTTACGTTGCAAAATGAAGAAGGAAAGGCAG 18479 32 100.0 35 ................................ TCGATACACAAATCTAAAAAGCTAACAATCGGGTC 18546 32 100.0 34 ................................ TTTAGTAGGTTTGTAAGGCATTTCCAAGAATAAC 18612 32 100.0 34 ................................ TTTTGGCGTTGTTATCAACGTTTGGTACATAACT 18678 32 100.0 33 ................................ TATAAAAAAGAAGTATGTTGATTTAGTTAAGCA 18743 32 90.6 34 ......T..C...A.................. ATTGGACGTAAGCGTGCTGCCACGAAAAATGATA 18809 32 96.9 33 .......................A........ CCATTAACGAAAATATAAAAAGCATACGTGCCG 18874 32 71.9 0 ....T.T..C.......A.T....T.A.G.C. | A [18897] ========== ====== ====== ====== ================================ =================================== ================== 17 32 97.6 34 GTCGCACCTTATATAGGTGCGTGGATTGAAAT # Left flank : AGATGAATATCCACCATTTTTATGGAAGTAGGTGTAACAGTTGCTAGTATTAATAACATATGATGTAAGTACAGCTAACAGTATTGGACAAAAAAGACTGCGAAAAGTTTCGAAAACATGTCAAAATTATGGCCAACGAGTCCAAAATTCAGTGTTTGAATGTGTTGTGGACGCAGCTCAATTTGCTACTTTAAAAATGGAATTAATTAAAATTATTGATGAGGATGAGGATAGTCTCAGATTTTATCAGTTAGGTAACAACTATAAAAAAAAGGTTGAACATATCGGTATAAAGGAATCCGTTGATTTAGAAAGTCCTTTGATTTTTTAGGTGCGAATGTATAGCACACATGAAATTCCTCGTACATTCGCACCTGAATTTTCATAATTTATGAGTGAATTTTAATATTTTTCATACAGGTTCTCTTATTAAATAAAGAAATATGTATATTTTTGAACAGAATTAATGTATTTTTGTATGATTTTAAACAAAAATCGCT # Right flank : TGGTAAGATGCTTGATAGTAATTTAGTGTCTCTGCTGGAATAAGAGGACCTGTTTCAATACATACGGAAACAAGTGTTGATCCGATTGATATTACTAGTATGCAGATTACGAAAAGTGTAAATTCTGAGCTGGGGAAGGATAAAGGATCAGATACAATGGGGATGAAGCATCGTGTTGATTTTGGAGTCTATGTTTTTTATGGAAGTATCAACACACAGTTAGCAGAAATGACAGGTTTTACTAACGAAGATACGGAGAAAATTAAAAATGCACTGGTTACATTGTTTGAAAATGATGTATCAGCAGCACGCCCTGAAGGAAGTATAGAAGTACATAAAGCTTGTTGGTGGAAGCATAATTCAAAACTTGGCCAGTACCATTCCGCAAAAGTACACCGTTTACTGGATATTAAGCGGAACATTGACGAACCAAAATAATTGATGACTATAACATTTTGGTAAAAGAATTAGATAGTTTAAAAGTGACGATTATTGATGGA # Questionable array : NO Score: 9.14 # Score Detail : 1:0, 2:3, 3:3, 4:0.88, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACCTTATATAGGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:56.25%AT] # Reference repeat match prediction: F [matched GTCGCACCTTATATAGGTGCGTGGATTGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-3.10,-2.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-14] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [81.7-63.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [10.05,0 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //