Array 1 83807-83576 **** Predicted by CRISPRDetect 2.4 *** >NZ_CABIVY010000001.1 Mammaliicoccus lentus isolate MGYG-HGUT-00010, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ================================== ================== 83806 33 100.0 33 ................................. TATGAAAAAATTTTATGGCACTAGACAATCGGT 83740 33 100.0 33 ................................. TATTTATCCGCTTCAATCATGAATGAAATACGT 83674 33 100.0 34 ................................. TATTTGAACAAGTAGATGAAGTTTATTATAGGGT 83607 32 87.9 0 .....................T......TA-.. | ========== ====== ====== ====== ================================= ================================== ================== 4 33 97.0 34 GTTTTAGTACTCTGTAATTTTAGGTATAAGGTA # Left flank : GGATTATCAAGCAAAAGAAAAAGCATTTGTAATCTATTTATATCCAGAAGCTGGCCTTAGTATTAAAGAACAAATAAGGTTCAGGAAAATACTAAACAACTTACCTGTTCCGGTTATTGTTTTAACCGAATCACCATGTTTTTTATCTGAGAGTATTAAAGGACTAAATTATTTTATTAATAATGTTCAAATGATTACTGAATCATTTTTTGAAGATAGCTATTGGAATGCACCAATTAATGTGGAAAAAGAACAGATTGAAGCGAGGTTTGAATATTTATTTGTAAAATATTGTTCAGTTTTAGAAATAAAACCAATTATTTCTAACTATTTGCTTGCGGATATTATTGTTTTTAAAGATATTGATCTTTATATCATTGTTTCATTTTTAAAACATTGTAATTTAGAATATCAATTAGATATCGATAAAACAAAAATTTCATTAGCGTTAGCAACTTATCTATTTTCTTAATTATAATTCAAGGTTATAATTGTGCTAG # Right flank : TAGCAAGTATCCTAAATGCTCGATTCCAATCGTGAGCATCTTTAATTTATATATTACAAAATATGACTGCCATATTTTGTGTTTTTTATAAAGTATATTGAGTAATATGTAATTAGGAAATGAATGTTTTAAAAAACGCTTCAATAATGTAGAGTAGTACATTTATAGCTTCTTTAACTCGGTCCTCTCTTTTTGTTTCTTATCATATGAATCCCAGACAAAATAACAACAACTTAAATTACTTGTTTTTGAGAATTTTATTATTCTAAGTATTTTCAGTTTATTGTTTGGACAACAGAGACTTTGCATGAAATATAAGTGAAAATCTCAACACCCAATGGTTTTTTAATTCAAAATATCAAAAGCAAAAAGGCGATTTGTCCGTTTAATGCACAACTGTTCAAACTATAGAAATAGTAGCTAATATTTATTTAAATCCTAATATACACAAAAAATACTTCAAACTAAATAACTACCAAATGAATGATCATTTTTATATC # Questionable array : NO Score: 5.71 # Score Detail : 1:0, 2:3, 3:0, 4:0.85, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGTACTCTGTAATTTTAGGTATAAGGTA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:73.68%AT] # Reference repeat match prediction: R [matched GTTTTAGTACTCTGTAATTTTAGGTATGAGGTA with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [0.00,-3.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [71.7-75.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //