Array 1 57822-59892 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP012543.1 Campylobacter rectus strain ATCC 33238 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================= ================== 57822 30 100.0 35 .............................. TCCAGAAAGCCAAAGCGACGCTTTTAAAAAGTTTT 57887 30 100.0 35 .............................. TAACGTTGCTTATAATGAAGTTTTAAAACGCTTAA 57952 30 100.0 39 .............................. TCGATACCGGACACGGCTTGTTTGATTTGCTCGTAGACC 58021 30 100.0 35 .............................. CGACTACAAGAGGCGCGCTCAAAAAGTCGAAATCT 58086 30 100.0 35 .............................. TTATTTTAACTTTCACGAGACAAGGCATGGGCGTA 58151 30 100.0 36 .............................. ATCCGTGCGTTTTTACTGCAAATTTAGAAAATCAAG 58217 30 100.0 34 .............................. TTGCCGAAAACAAGTCCGTTACAAATGCCTCTTT 58281 30 100.0 37 .............................. AACTGGTTTATGCCCAGTTCTTGTAATTTCGCAGCGA 58348 30 100.0 35 .............................. TCGGTAATATAATAGAAATTGTCCTTCTTGTATAA 58413 30 100.0 36 .............................. GTAAAAAACAGCTATCGTCAAAGGGGGTTTGGCGAT 58479 30 100.0 37 .............................. CCCATCATACTTACGTTTGAAGAATTGGCCGCGATTA 58546 30 100.0 34 .............................. CTTGTTAGTCTTATGTTGGCTATTGTTTTTCAAA 58610 30 100.0 34 .............................. AACGCCACAGCGCATCAACTCATCCTCTCCGAGG 58674 30 100.0 35 .............................. CTTAGGTATTGGAGATAGTTCAGCCCCTCTTTCAG 58739 30 100.0 35 .............................. AAAACAAAGGAGTAAATCAAGGTGTTAAAACTTGA 58804 30 100.0 34 .............................. TATACAAAAGAAAAATTATCATCCAAAAAATAAA 58868 30 100.0 37 .............................. GTCAATGAAAAAGCTAACGGACTATCAGATAGCGTTT 58935 30 100.0 36 .............................. AACATCGCGAACGAATTTACAAAACTATCCTTGACG 59001 30 100.0 37 .............................. TCGGAGCGGTAGCCGGAGCCCTCATAGGCGGAGCATT 59068 30 100.0 36 .............................. TTACACCGCCAACGCTCGGTTTCTCCACCCATTGGC 59134 30 100.0 37 .............................. CCGCTGTAGTCGATTTTGCCAATAAACCAAATATCGT 59201 30 100.0 36 .............................. AAATACTCTTGAGTATTCTCGCAATCATCGAATTGC 59267 30 100.0 34 .............................. AGGTAGAAAAGCTTTTCGCCCTCGATCTCCTCGC 59331 30 100.0 35 .............................. TCCCCGTCATTCCTGAAGGAGTTGTAGACTTGGTA 59396 30 100.0 37 .............................. CGTTTGAAATAGCTTGCGATCTAATCGAACGAGCGGC 59463 30 100.0 36 .............................. GCAAAGATGAATTAACAGACAATAAAACGGTATTTG 59529 30 100.0 37 .............................. CCGTAGGCTTTCCGCATACTACGCAAAAGGGCTGTCT 59596 30 100.0 36 .............................. AAAATCTTAGCACCTAGCCAATTTTTAGGCGTAGCT 59662 30 100.0 37 .............................. AACGTAACTACAAAACAACTAAGAAGCACCTAAAACC 59729 30 100.0 34 .............................. CGGCTAATTCCCGCAGCTTCTATAATCTTTTGAG 59793 30 100.0 36 .............................. TTTTTTACAGCTTTTTACGCTAGGCGTTTCAGCTAG 59859 30 93.3 0 ......................GG...... | AGGA [59879] ========== ====== ====== ====== ============================== ======================================= ================== 32 30 99.8 36 GTTAAAATTTACTCCGTTGGAGTTTGAAAC # Left flank : GATGCGCCTTATGAGGGATTTAGGTGGGGATAAATTTGATATTTTGTCTGTAAGAGGCAGCAAGTATCTTGGTTGCATTTTGATGATTTGATTTTAGCGCCTTGACTTCATTAAAATGTGGCATAAAAACCGCTACGCATTTACGGTCAAATTTGACCTATGCGCCTTTGGCTGCGGTATTGGTTTTTGCACTAAAACAGCGTTTGTGATTTTGCTTTGGATGTTTGTGATAAAATATAAAATGCACCCGACTTATAAAATTTGCTTTGATCGCTATGGTGAGTTGGATGTTGTTAATTTGCTCTTACCGTAACGGGACATTTGATCTATAGGTGCCCTTTTTAAATCTAAACTATGTCGATAAAGCTTTTTCTAAGATTTTAGAAATGATGAAATTTAGGGTATTTCGTATCGATACTATTTTGCTTTTTATACAAATTTAAGGCGTAAAAATATAGACTTTGAGTTTTAATAGCCCTAAAAATGCATATTTTGGTGCT # Right flank : CTCTCAAAGCTCACGTTTTTGGCCTTGCTTTGGCGTTAATTCTTCTTTATCGGAGCCAAAGCGCTTTTGGGTTCATTTAAGCGCTTAAACGTCTGTCTCGTTTTATTTCCTTGGGTCCTAAAACCGCCGAGCAAGCCGACTCCGCTTAAATTTAGCATCTCGGACATCATCGCCCAAATGTTTCGATCCGTTTTGCCGGAGAAAAACGTACGTCAAAAAACCGCCAAAACAAATTTCACTCGTCAAACAGCCCTTTCTCAAAGCTTTTCACGCGAAAGCTGCGCCTTTGCAGCGGCGAGTCGCCCAGCCTCGCGATCGCGTCCAGATGCGCCTTCGTGCCGTAGCCCTTATGCGCGGCGTATCCGTAGCCGCCGTGCACGCCGTCCCACGCTCTCATCAGTACGTCGCGGCTTACTTTGGCTAGGATGCTGGCTGCACTTACCTGCGCGACTTTGCCGTCGGCTCCGACCATGGTTTTTACGCCCGTACCGTAGTTTGCG # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTAAAATTTACTCCGTTGGAGTTTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-4.60,-3.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [70.0-61.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.37,0 Confidence: MEDIUM] # Array family : NA // Array 2 2308764-2307803 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP012543.1 Campylobacter rectus strain ATCC 33238 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ========================================= ================== 2308763 29 100.0 41 ............................. TTATAATCGAAGCCAAAGAAAATTTCATAAAGAATTTTGAG 2308693 29 100.0 38 ............................. TTCGGATCGGGCTCTCCGTTTGTTTTGGCTATGGCTAT 2308626 29 100.0 39 ............................. TCGCAACCAGCGCCAAGGCTCTATCATCCGTCCTTTGGC 2308558 29 100.0 37 ............................. TACCGCTTTATGCACGGTGTAGTATTGCGAGAGCTAG 2308492 29 100.0 38 ............................. TGCAAATTCAAAAAATTCTTTCGGAGTAGGGCAAAAGT 2308425 29 100.0 39 ............................. TGATGATACTGTTGTATTGTTGCCAGAATTTTGAGCTAG 2308357 29 100.0 37 ............................. TTAAATTCGTTTGCGATGTTTAACGTAGACGCTAGCC 2308291 29 100.0 36 ............................. CACGTTAAAACTAGTTGTCTGAGAATTTTCATAAGA 2308226 29 86.2 36 ..........G....GCC........... TTTTCAGTTGCTACTTCTTCAAAATCTTTATCAGTG 2308161 29 96.6 37 ...............G............. TTTATCAAACCGGGATATCTAAGGAGGGCATGGCCTA 2308095 29 100.0 36 ............................. CATCGATGAGGATAGCCATCCTCTTGAAATAGATGT 2308030 29 93.1 36 ...............A....A........ CGGTATAATGTCGTTTAACATAGCTTTATTGAGGGC 2307965 29 96.6 36 ...............G............. TGCGCACTAGGGAAGCGATATTGCCCTAGCCAGATC 2307900 29 100.0 38 ............................. CCCGCATGATGATAATACACAGATGGTTCAGGCACCTG 2307833 29 79.3 0 A..............G......A.G..TG | A,A [2307810,2307812] ========== ====== ====== ====== ============================= ========================================= ================== 15 29 96.8 38 GTTAAATTTTACTCCTTTGGGGTTTGAAA # Left flank : TATGGATTTACGGTAATGTTTTTTAGAAACGACTACCCTAAGCACCGACGCTTTCGGTGTTTGAGAGGATTTATGACTACGGGCTTGAGTTGTTTTGATCCCGCATTTTTAGGTAATTTTATTGCGGTACATCGTAAAATAGCCTCTATGCGTCTTGAGATTTTATTATTTGACGGCTCGAACGGCTTGCTAAATTCGTATCGAGATATCGGACTTTAGGTAAAATAATCCGCTGCCGCTAAATGCTTTGGCTTCGTGTATTTAACTCGACTTTGGATAAAACGATCGGCTGTAGATGATTTTGCAATGATGCGGCCGGTTTTATCGCTTGCATTTTTAGGCGCGCTTGAGTTATGCCGATAAAGCTTTTTATAAGATTTTAAAAAGGGCGAAATTTGGGGTGTTTCGCGTTAGTTTGGTTTTATATTTTAGTCAAATTTAAGGCGTAAAAATATAAACTTTTTATTTTGATAGCCATTAAAATGTATGTTTTAGTGCGG # Right flank : AAACGCATATCGGCCAAGTATTTCGGGATTACCGCTGCTCTAGCGTGGTTTTTAGCTCCGCCTGTGGTTATTTCGCCTCTTACATCTGCCGCATATAAGGCTTTAAATTCGTTAGCTAATCTTTTTAAAGAAACCTGTTATTTCGTGGCACCGCTTCGCTTGTTTTCTATCTTTATGAGATAGAATTTAAGCCTTGGGAGGTGATGAGCCTATAGCTTTACTTATTTCGCTTAGATTTCCGTAGAGATTATTAAAATTCTGTTGCAAGTGATACGCCTATTGCTGCAAGTAAATTTTAGTATGTCTATGGGGTCGCCGTGGCTTTTGTTATGGTCTAACCGCCAACTGTATGTTTATTATTAAATTAATATCCCTTTCAAGGCGAGGTAAATTTAAAATTTCTACTTTTTAACAAAATAGAAAAGTAGCATTTAAGAAAATAATATAAAATTTTTTAAAAAGTCTTCTTTTCTTAAGTTTTTTGCAAAGAGTAGATTATG # Questionable array : NO Score: 3.16 # Score Detail : 1:0, 2:0, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTAAATTTTACTCCTTTGGGGTTTGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:68.97%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-0.90,-3.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [58.3-73.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,1.05 Confidence: HIGH] # Array family : NA // Array 3 2503982-2500546 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP012543.1 Campylobacter rectus strain ATCC 33238 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================= ================== 2503981 30 100.0 36 .............................. GGATGATTTCTTGCTACTATACCCTGAGTATATGTA 2503915 30 100.0 36 .............................. ACGGAGGTTTCGTCGGCGGCGCTATAAACATAGCAA 2503849 30 100.0 33 .............................. TTGTATTTTTACTCTACTACCAAAGATAATTAT 2503786 30 100.0 37 .............................. ATCATAAATTTCAATGTCTCGTTTAAATTCGCTCAAA 2503719 30 100.0 37 .............................. AGCGCAAGACGCATAGCAAAAATCACAAATATCGAAA 2503652 30 100.0 35 .............................. GCTTCTGTTATAAGTCTGTCTAATTTAGATTGTAG 2503587 30 100.0 36 .............................. AAGCCGAGTAGCGCAATGGTAATGAGGCTAGAGCGA 2503521 30 100.0 35 .............................. TTTGGCATATATGAATGATAAGGGCGGCAAACCTA 2503456 30 100.0 36 .............................. GCTTGTCCTCGTCCATCGTCTTTTTTACGTTATGGA 2503390 30 100.0 36 .............................. CTTTTAGCTTTGGCTGCAGCTGGGTTATTTGCACTC 2503324 30 100.0 35 .............................. ATATGAGGCGCTGGAGACACTACTTTAAGATTATT 2503259 30 100.0 37 .............................. GAGATAGAAACACAATTAGAGTTGGGTATAAGTCAGT 2503192 30 100.0 34 .............................. CTTTATCAGACGTACTGCCTAAATTAGATGATTT 2503128 30 100.0 36 .............................. GGTCAAATTTTGCCTTGAGATACGCCCCGTCTATCA 2503062 30 100.0 37 .............................. GGTCAAATTTTGCCTTGAGATACGCCCCGTCTATCAG 2502995 30 100.0 35 .............................. TTCCGTATTCCTCGGCAATAAATAGCTTATAATCA 2502930 30 100.0 32 .............................. AAAAACGGCGTAACGCCCAAGCCTAAATTTAT 2502868 30 100.0 34 .............................. CGTATTCTTCGCATACTTGATTTTCGGGCATTAT 2502804 30 100.0 39 .............................. CTATGTTTATCTAGAACATTTCTGCCACTCTCTTCATTA 2502735 30 100.0 35 .............................. CTTAGAGAAATAATAGCCTATCGTATAGGAATAGG 2502670 30 100.0 34 .............................. TTTACAAACTGATTTATACCGTCGCGGATACCGT 2502606 30 100.0 36 .............................. AATAAACTTAATGGTGAAACTATAGATGTGCTTACA 2502540 30 100.0 36 .............................. TTTTACGAATAATTTGCCTTATGCCTTTCGCATAGA 2502474 30 100.0 34 .............................. CAGACGCTGCCCGAAGAAACGAGAAAAACATACG 2502410 30 100.0 34 .............................. CACCAAGCCCAATTCACATAGATAAGAAAGTCGG 2502346 30 100.0 35 .............................. TACGATCGAGGAGATGGGCAAAATTTTAAGAGCGG 2502281 30 100.0 37 .............................. AACTAATAGCCTTAAAATTTAAAGACGGACAAGAATG 2502214 30 100.0 34 .............................. TTGTCAAGATCGAGTATGGTTAGCTCGACGCCGG 2502150 30 100.0 36 .............................. ATTTTAAAAGATTTTTCATTTGGGCGCTATAAGGAC 2502084 30 100.0 36 .............................. GGCTTGCCGTCTTTGCCGATTTCGGGTTTGATGAGA 2502018 30 100.0 34 .............................. TGGGCTTTTGCTTTTTCCACCTTCTCTGCGTCTT 2501954 30 100.0 34 .............................. GCTATTTCGCTCTCTTCTGTCTCTATTTGACTCA 2501890 30 100.0 35 .............................. TTGTTCCGCTATAGGTTCTACTTGGAATCCTGGCG 2501825 30 100.0 35 .............................. AGTCTATCTAAATTCGTTTAAAATTTCCACCTCTA 2501760 30 100.0 34 .............................. AATAGAAATTCGAATATAAATGTACTAAAGTACA 2501696 30 100.0 34 .............................. GCATTTTTGCTCCTTAAAATTTGATTTTCTCGGT 2501632 30 100.0 39 .............................. TCTTTTTTGAATAGTCAATGGTCGAAATTTCAGGCTCCC 2501563 30 100.0 37 .............................. AACACCATAAGCAACGAAGCGAAAAAAGCCGAGAAGT 2501496 30 100.0 37 .............................. GATTTACCCTCTTTGATATAGATTTCTTGCTGTGCTT 2501429 30 100.0 35 .............................. AATCTGATGAGGGGGATTTTCATCTGAATTCTTCT 2501364 30 100.0 34 .............................. AAACGGCAAGCAAGTCTAAAAAGTCTAAGATTTA 2501300 30 100.0 36 .............................. TTGGCTTTTAAATTTGGTATGGATTTGACAAACTCG 2501234 30 100.0 36 .............................. TTTCATTTGATTTCTTAAGATTTTCATTAAGAGCAT 2501168 30 96.7 36 .........C.................... TATTACAGTTTGCTTTATCAAGCTTCGAATAATAAT 2501102 30 96.7 36 .........C.................... TTGTATTTCGTCGAGTCCCGCGGCTTTAAGCTCAAC 2501036 30 100.0 37 .............................. CATTTAGGATCATTGGGATTTTTCTTGCAAAATTCAT 2500969 30 100.0 35 .............................. TCCGCCCAAAACTCGCGCAGTTTAGCTTTGATATT 2500904 30 100.0 37 .............................. CTCCAAACACTCTCTCATCAAAACCAAACGGTTCAAA 2500837 30 100.0 36 .............................. GCCGCAGCATATCAAGACAATATTTTTCGCCTTTAG 2500771 30 100.0 35 .............................. AAAATCAAGCCTGAACCAACCTAATATCAAGCGCA 2500706 30 100.0 35 .............................. AAGAAAAAAGAGCGAGATAAGTGCGTAGTGGTGGG 2500641 30 100.0 36 .............................. ACGCGACGTATTCTACTACCTCAAACTCCGTGTTCT 2500575 30 83.3 0 ..GT..................C..T..G. | ========== ====== ====== ====== ============================== ======================================= ================== 53 30 99.6 36 GTTAAAATTTACTCCGTTGGAGTTTGAAAC # Left flank : TATCTTGGTTGCATTTTGATGATTTGATTTTAGAGCCTTGACTTCATCAAAATGTGGCATAAAAACCGCTATGCATTTACGGTCAAATTTGACCTATGCGTCTTTGGCTGTTTTGGTGTTTTACTCCCAGCGTTGAGAAAATTCGCATCAAATTTGACTTATGTGTCTTTACCGCGGTATTGGTTTTTGCGCTAAAATGGCGTTTGTGATTTTACTTTGGACGTTTGTGATAAAATATAAAATACACCCTACTTATAAAATTTGCTTTGATCGCTATAGCGGGTTGAATGTTGTTAATTTGCTCTTACCGCAACGGGACATTTGATTTCTAAGTGCCCTTTTTAAATCTAAACTATGTCGATAAAGCTTTTTCTAAGATTTTAGAAATGATGAAATTTAGGGTATTTCGTATCGATACTATTTTGTTTTTTATGCAAATTTAAGGCGTAAAAATATAGACTTTGAGTTTTAATAGCCCTAAAAATGCATATTTTGGTGCT # Right flank : CCGGTGTCGGTATCCCCGCCAAGCTCATAAAATTCTCGGCAAATTTGCGCAAAACCGCCCATAAAACAAGCTTAAGCTAAATTTTACAAAGCCGCGTATAAAACTTACTCAATCCAAAAAGCCAAACCGCCGTTTAAATTCGTAAAATAGCGTAGAAAAATCACCCAAACCAAAAACACATCGTTCAAATTCAAAATCCGTTACAAAAAACCGCTTGTCTCGCCAAATTTAACCCCGGTAGCTCAAAATTTACACATATTTTTAAGTTCGGTTAAAAAAATTTTATTATTTATTTTAGTTTTATATTTTTTTAAATATACTTGAAAAATTTTAAAAATTTAAAGGCAAATCTATGCTCACCGACCTCGTAAGCTCTATAAATTCGTTCCTTTGGGGGCCGTATTTCCTCATCGCGCTACTTTGCGGCACCGGACTTTACTTCACGATCAGGCTGCGTTTCGTGCAGATCTTTAAGTTTAAAATGGGGCTTCATAGGCTTT # Questionable array : NO Score: 3.24 # Score Detail : 1:0, 2:0, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTAAAATTTACTCCGTTGGAGTTTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-3.70,-4.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [45.0-70.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,1.05 Confidence: HIGH] # Array family : NA //