Array 1 10058-7283 **** Predicted by CRISPRDetect 2.4 *** >NZ_VFRP01000027.1 Amaricoccus solimangrovi strain HB172011 Contig_27, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 10057 29 100.0 33 ............................. CGTCGCCATCTCGCCCGCGACCGGGTGGATCTC 9995 29 100.0 32 ............................. GTTTGACGATGACCCTCGCGGAGATCGACGCG 9934 29 100.0 32 ............................. GGAGCCAGTGGGTCGACGTGCCGATCGGCAAG 9873 29 100.0 32 ............................. GCGGAGGCCCACGCCTATCAGATGATAGCCGA 9812 29 100.0 32 ............................. ACGATGAACAGGATATAGCGCATCCGCCAATG 9751 29 100.0 32 ............................. GATCTGGAGGTTCCCGAGCTTGTTGTCGCCGC 9690 29 100.0 32 ............................. GCGCTCGGGGGGAGGCCATGACCAGAGACAGC 9629 29 100.0 32 ............................. ACGATGCTCGTCCGGTCGTTCTCTGACACGCC 9568 29 100.0 32 ............................. ACCGAGAAGACATCCCTGTACCGCCATTTCGA 9507 29 100.0 32 ............................. GTGCGCGTGAACGGAAGCTCGCGGACGGGCAG 9446 29 100.0 32 ............................. GCGGCGGACATCTTCCTCGAGCTGCGCGGCGC 9385 29 100.0 32 ............................. GAATACGTCCTCGGCACCAAGCCGGGCGAGCC 9324 29 100.0 32 ............................. CGCGAGCAACACGACTGGCCCCCGCGCGGTCG 9263 29 100.0 32 ............................. ACGCTCGCCACGGGCGAGACGGTCGAGATCCA 9202 29 100.0 32 ............................. ACCGCCTGCGGCCGCCAGGTCTGGCCGTTCCA 9141 29 100.0 32 ............................. CGGAACGATTCGGGAACTTCCGCCGGGTTGGA 9080 29 100.0 32 ............................. TACAGATTGCCGTCGGTGATCGCGTTGGACGC 9019 29 100.0 32 ............................. TCGTCATTCGACGCCGTGAGTTCGACCGTGAC 8958 29 100.0 32 ............................. CTAGATCCGCCGAGCGATGTCAGGGACGATGC 8897 29 100.0 32 ............................. CACTTGATTTGCTTCGGGTTTTGGAGGACTGC 8836 29 100.0 32 ............................. AGGTTCACGGCATGAGTTCGTTCTACAAGATG 8775 29 100.0 32 ............................. GCGGAGGTTCAATCCGGCCCGACCGCTTGAAT 8714 29 100.0 32 ............................. ATTTCCTCCCAGCGGAGGCGCACGATCTCCGG 8653 29 100.0 32 ............................. CTGCACGGCCGCGAGGGCCACCGAGCCCGGCA 8592 29 100.0 32 ............................. AAATGGGGGACCCTTCCGGGCGGGTATGTCGC 8531 29 89.7 32 ..........................GGA GACTGAGAATGCCGAAATTCAGGAAGAAGCGC 8470 29 100.0 32 ............................. AACCCAACCAGCGAAATTGCGCGCGATCCGCC 8409 29 100.0 32 ............................. CCGGGTCGGGGTCGTCAAACAGCGTTTGCCAT 8348 29 100.0 32 ............................. GGCAATCGTCGGTGATGACGAACCCGACGCCG 8287 29 100.0 32 ............................. ATCGGCCGGGTCATCCTGCGTCTGGTCCCGAT 8226 29 100.0 32 ............................. TTCGAGGTGATCGAGATCGACGGGGCCACGGC 8165 29 100.0 32 ............................. TCGGCAGGCCCGATCCGAAACCAGCGGATGAT 8104 29 100.0 32 ............................. CTCTTCCGGGCGACCGGGAGCGCGGCGGGAAC 8043 29 100.0 32 ............................. ATCGGATGACGCGCGGCGAGAGGGTTATCGCC 7982 29 100.0 32 ............................. TCATCTCGTGGTGCGCCGGGCCGCTGTCTGGC 7921 29 100.0 32 ............................. GACATGGACAAGCTCATCTCGATCTCCGCCGA 7860 29 100.0 32 ............................. CCGCCCAGCAGGCGCTGGACTGGCTCGATGAC 7799 29 100.0 32 ............................. GCCTGCCGGATCCTGCGCGTGGAGCATCGCGG 7738 29 100.0 32 ............................. GCCCGGCATGGCGGCACACGGGGAAGATCACG 7677 29 100.0 32 ............................. ATCATGCAGTCCGATGGCGAGACGCCGATGGC 7616 29 100.0 32 ............................. GAGGTCGAGGCCGGGCTCGCGGGCGACGACGA 7555 29 100.0 32 ............................. CTGTTGCTCGCCGAATGGCTCGCGGGCGACAC 7494 29 100.0 32 ............................. ATTGCCTCTACCACGCGGCCAATCCGGGGGAG 7433 29 100.0 32 ............................. TCCACGGCCGTCACCTGGTTCTTCCAGCGCGG 7372 29 100.0 32 ............................. ATCCCCTCGCGCCGCGCCAGGTCTTGGATCGA 7311 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================= ================== 46 29 99.8 32 CTGTTCCCCGCGCGAGCGGGGATGAACCG # Left flank : AGATCGAGATCGTGCTTGAGGCGGGCGCGCTGCCGCGACCGGACCCGCCCCCGGAGGCGCTTGGCCCCGCCTTCGAAGACGAGGCTTCCTCCGGCGACGAGGGCCACCGTGGCTGATGTCCGGGTGGCGCCATGATGGTCATCGTGGTGACCAACGCGCCTCCCCGCCTCCGGGGACGCCTGGCCGCCTGGCTCCTCGAAGTCCGGGCGGGCGTCTTCGTCGGGGATTACTCGGCGCGGACACGGGAGCGGATCTGGGACCAGGTGATCGGCGGCATCGAGAACGGCGACGCCGTCCTCATGTGGAGCGCGCCCACCGACCAGGGTTATGACTTCCGGACGGTCGGCGCCAACCGGCGCATGCCGGTGGATTTCGATGGTCTCAAGCTCGTCGCGTTCTCCCCTCTCAAGGAGGGTTGACCCCTCGGTCAAGCACCCTTCAAAGTCGGTGCGCTCTTTGACATCGGAAAAAGACTTATGGATTAGTCTGTTCCAGCCAGA # Right flank : GGATCGAAACTACGCGTTGTGTGCGATAATCATGCTGTCCGGCGATCCGGGCGGATTGTGTTTTCACCCGCGCATGGACGTCCGGATCGTCGAGCGGCTGGACCGCAGCATGTTCCCGCGACCCAAGTCTCGTCGACGCGCGGGCTTCGCGGGATCGAGACCGGGCGGCGCCCCGAACCAGGCGCGGCGCTTGCGCGCGACGTCCGCGCGGTCCTGACCGACGGCATGGCCGGCCTTGTTTCCGCGCAATGCCATGCCGAAACGGGAGGCGGCCCTGCGCCCGATCCTGCGCTTCGTCGAGGCGACCGTTGCTGGGGAGGTCAGCGCTTCGGCAGGCGTACCAGCATCTTGATTGCTATTCCTACTGACACCATATTCCGTCAATCAAAGTGGAGAATGAGCATGCGTCTCGAGACTTTCGCGGAAGGCGGGCAGTTTGCGCCTGGTCGGATCGCCGAGGCGTTGCGCACGACGATGGACGAAGTCGCGCGGACCGTGGG # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGTTCCCCGCGCGAGCGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [4,4] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGCGAGCGGGGATGAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [43.3-55.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.14 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //