Array 1 277561-278982 **** Predicted by CRISPRDetect 2.4 *** >NZ_ANDP01000016.1 Streptococcus agalactiae CCUG 49072 ctg120000800247, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 277561 36 100.0 30 .................................... ATTAAAATTAAAAACAACTAATTCGTCTAT 277627 36 100.0 30 .................................... ATGTTCTGAATTACCTTTCTCGACACTCCG 277693 36 100.0 30 .................................... AACATTAGCCTTTTCTAACTCTTCAGCTGT 277759 36 100.0 30 .................................... TATGTCTTCTAACAGTTGCTTCTTGTGCTT 277825 36 100.0 30 .................................... CCGTCAAACAAGAGCGACAGCGAAACAAGC 277891 36 100.0 30 .................................... TTTTATTGGTTTTCTAAGTGCTCGACCATC 277957 36 100.0 30 .................................... AGTTACTTCTGCTTGGGTTTGATAAGGGTC 278023 36 100.0 30 .................................... GAAATGTGGAGTCATTCAGGTTGATGATGG 278089 36 100.0 30 .................................... AAAAAATAAATGACTTTAAAGCACTTGGAG 278155 36 100.0 30 .................................... TAGTAGCCATTATTATTATGGCTTTTATTT 278221 36 100.0 30 .................................... GGATGATTTCGATTATGCGGCGGTGGTTGA 278287 36 100.0 30 .................................... AAATGTTAATTTCATATCTACATCTTGTTC 278353 36 100.0 30 .................................... ACATAACGTTCAAAAGTTTCCACTAATAGC 278419 36 100.0 30 .................................... TCAAACAACATTGGTGATCTTATTGCGGTA 278485 36 100.0 30 .................................... TTATTTAAGACGTGATTTAATGTTAAAACT 278551 36 100.0 30 .................................... CAAACTATCTTGATTATAAGTGGACTGATA 278617 36 100.0 30 .................................... ATTTTTACACGAGTGCTAGAAAACGGGGCA 278683 36 100.0 30 .................................... ACATTTGTTAAATTTGAACTTACTGGAAAT 278749 36 100.0 30 .................................... TCCAAAACAAATACGAATGCTTGAGCGATA 278815 36 100.0 30 .................................... GATTACCTTAGATGATGTTCTAATCGGTAA 278881 36 100.0 30 .................................... TACTTGACGAATTGAAGATGACGGAATTTA 278947 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 22 36 100.0 30 GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC # Left flank : CGAAAAGCCAGAAGTGAAATCAATGGTAGAAAAATTAGCAGCTACTATTACAGAACTTATCGCATTTGAGTGTCTAGAGAATGAGCTTGATTTAGAATACGATGAAATTACGATTTTAGAACTCATTAAGGCACTGGGAGTCAAAATTGAGACACAGAGCGACACTATCTTTGAAAAATGTTTTGAAATTATACAAGTTTACCATTATTTAACGAAAAAGAATCTCTTGGTTTTTGTTAATAGCGGAGCTTATCTTACCAAAGATGAAGTTATAAAATTATGTGAATACATCAATTTAATGCAAAAGTCAGTACTCTTTCTAGAACCTAGAAGACTCTATGATTTACCGCAATATGTTATTGATAAGGATTATTTCTTGATAGGCGAAAATATGGTATAATATTAGTAAAAGCACAGTAATAACAAGGAATCATCGAAACTGAAGTCCTGCTGAGACGAATGGCGCGATTACGAAAGCTCAAAAGAAAATTTTCTACGAG # Right flank : CAAGCTAATTCTCATCTCACCGAGATGGATAGTTTTAGAGCTGTGCTGTTATTATGCTAGGACATCATTGTGGTGTTCTAGTTTTTTGTTATACTGAAATAAATTTTCAGAGAATGTGGGGGAAGGCGGTAATTAGATTAATTCAAGACGTAATTCAGAACTTAGTTGGCCAAGCTAACGAAATCACCCCAATTTATCAGTTTGATTGGGAAACTTATATATTGGCGACTAAAAAATATGAACGTCATTTAGAGGTGTGTCTATTAGTAGAAAATTCGAATTGTTTTTCGGATTCAAAGAGAATGTGTCAATAAAAGAGATATGAAAGGCTATAATTCCAACCTTATGGTTAAAGGGCTAGGTTGTTCTACGCTTTACTTAATTATTAGTTTGACAGCGTTGGTTCTTTTAGTGATTGCTGGTGTTTTCTTTGTCATTAATACTTGCAAGCTTACAAGGAAAGCAGTGGAGAACCTATCCATAATCAACTAACAGCTATG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:58.33%AT] # Reference repeat match prediction: F [matched GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-4.70,-0.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [56.7-60.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], //