Array 1 28075-29276 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_NHZZ01000013.1 Priestia aryabhattai strain SQU-R12 scaffold13_size121300, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence            	Spacer_Sequence                         	Insertion/Deletion
==========	======	======	======	===========================	========================================	==================
     28075	    27	  81.5	    38	A.....A....TAG.............	GATGGCCATCGGGATCGGGCGGGCAGCAGGATTCGCTG  	
     28140	    27	  85.2	    37	.......GA...A.T............	TACAGGAATTGGAGCACCTTGACCGACGTCACGTAAG   	
     28204	    27	  92.6	    37	......T.......G............	AATCCATTCCGTGCCTTGTTCATGGTAGAAATCGCCG   	
     28268	    27	  81.5	    38	C.......AG..A.........A....	GATGTCAAATGCTCTTCCATATGCATGCATGGATTTAG  	
     28333	    27	  92.6	    40	.........C..A..............	TTATGTATGGGAAGTTGGTGATACGCCCCATGGAGTACCC	
     28400	    27	  88.9	    38	.............G......T.A....	TACTTAGTGTATTTTTACAGAGTGATAAAGTTAAGTTG  	
     28465	    27	  88.9	    39	........C....C..G..........	AGCTGTTAACATCTCTGTTACAACACCATCTGCCGTAAG 	
     28531	    27	  96.3	    39	..............G............	GTTCGTACCGGATTTTAGCGAGGAGGAATTGGCGGAAAG 	
     28597	    27	  96.3	    39	........A..................	GCACCAAGGCGGCTCGTTTCATCAACCCTGATACACAAG 	
     28663	    27	  88.9	    38	..G........T.G.............	GTGGGGAGCAAATGGCGTTCCAGCCATGAAAGATTCTG  	
     28728	    27	 100.0	    38	...........................	GGGCGGAAAAGCACCTTTTGGCTATGATAAGGAAAAAT  	
     28793	    27	  88.9	    39	...........TAC.............	GCCGCCAAAATTATATGGACTTTTACCGACCAGTGTAGA 	
     28859	    27	  92.6	    39	...........T....G..........	GCCAAATAACGCTAATTCTTCAACTGTACATTCAATATG 	
     28925	    27	  85.2	    38	.......CA........A....A....	TGTTACAATGTTATCGTTAATGATATTCGCAAACTTCG  	
     28990	    27	  92.6	    39	.....C......C..............	TAACCAAAAGGCTATTAACTTCTTAATGGCTATGCAATG 	
     29056	    27	  96.3	    37	...........T...............	AAAGGGATTTATTGGATTTTTTTGTATCACATTTGGG   	T [29077]
     29121	    27	  81.5	    39	........AG....T.A.....A....	TGTTGAGTTTTTTCTCCTTTTTCTTCTCCTTAGACTGCG 	
     29187	    26	  81.5	    37	.......GA.......-A....A....	TCTTAACTCATAAGTAACCATAAGCCGTTTCATTTCT   	
     29250	    27	  85.2	     0	.......A.G...A........G....	|                                       	
==========	======	======	======	===========================	========================================	==================
        19	    27	  89.3	    38	TTTTATCTGAACGTAGTGGGATTTAAA	                                        	       

# Left flank :   AATCCTTTAGTGGAGAAATCTTACCTGAGTCGGAGAAGGTAAAGCTTGTGAGCGCTCTGTATAAACGAGATAATTTGAAGAATACCGATTTTTTGAAGAGATTTGATGGTGCGCTAGAACAGTTGAATACATTTGATGACTACACGCTCTCCAATAAAGACGCACAAAAGCTGTTGCGAGATATCCAAGCTGAGCTTGTTATTCCTCGCGGTGTGTATGATAACCATAGCTATTTGTTCAAGCAATTGGAGCAGGCGGACAAGGAGAAGAGAGCCGAGTTGCGTCAGAAGATTACACAGCTTACAGTCAGTCTACGAAAAAACGCTACGAAAGGACGAACAAGAAAACTACCTCATAAAGGAAAGAAACATAATGGGGAAGAATATGACTTGCTTCCATGGATTCAAATTCTTGATTTAAATTATGAATTTAATGAGGGGGTAAAAACGGGTTCAGGTGTTTTGCTAGATCAGGAAATAGACAATCAAATCTAATAATCT
# Right flank :  ATATTATTTCTACTATTATTAGCGCTTCAACATCCAAAAGTACTGCAAGAAACCTTCATTTTTTTCTAGGTTATCTTATAAAAATAAGAAGGCAGCCAAAATTGCACAACTAGAATTACGTTTTATCATCTTGGATTACTAATTGCATTTGAAATATATCTGATTCTGTAATTCCTGCCATTTTTAACTCATCTTGAAGGGTCATTCCCTCTTCGATCTTTATTTTCCTTTTCGTACCGTCCCTTAATGTAAAGATCCTCATGTAATCCATTCGTCATTTCTCCCTAAAGTATAAAAACTATGTTATAAATCCTCTTTTATCAAGTAGTACCTTAGTTGATCTTATCTTTATCTTTTGAATCCAAAATTCACCATATAAGTTATTACTAATGAAATAACAGCAGCAATAATAATCTTTATGTAAGAAAGCTCTAAAGCCCATGGGCCATACTTATCTGGATTCAAACGATACATAGACCACCACTGTCCATTTTCACCTT

# Questionable array : NO	 Score: 3.33
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.46, 5:-1.5, 6:0.25, 7:0.01, 8:1, 9:0.11,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     TTTTATCTGAACGTAGTGGGATTTAAA
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:70.37%AT]
# 	Reference repeat match prediction:         NA 
# 	Secondary Structural analysis prediction:  NA [0.00,0.00] Score: 0/0.37
# 	Array degeneracy analysis prediction:      F [21-27] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [66.7-70.0]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [0.41,0   Confidence: MEDIUM] 

# Array family : NA
//