Array 1 5971-7841 **** Predicted by CRISPRDetect 2.4 *** >NZ_AESC02000051.1 Clostridium botulinum V891 Contig52, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 5971 30 100.0 36 .............................. AAAGAAATTAAAAGAGTAGGTATAACAGAAATATTA 6037 30 100.0 35 .............................. TCAGAAAATTGATAGGAAGATGGCGTTATTTTTAT 6102 30 100.0 37 .............................. TATATAAATTTGAATTATTAGATTCTCTTTTTACTAA 6169 30 100.0 36 .............................. ATATATCCTTCTATATCGTCTATAAAGCATCTACGT 6235 30 100.0 36 .............................. TAGATTTTAGTTCTAAAGCTTATTCTTTTAATATTT 6301 30 100.0 37 .............................. TTTAATCACTCCTTTCTAAACTGGTCGAATTCGACCA 6368 30 100.0 35 .............................. AGAAAAATGGACAAGTCTTTGGCAAAGTTGTTTAA 6433 30 100.0 37 .............................. TGATATATTAGCATAAGTCGTCCCGCGAATTATAACT 6500 30 100.0 34 .............................. TTGCCCTCTATGAGATAATTATTGTCTTTAACTG 6564 30 100.0 37 .............................. TGTCATAATCGCAAAATAACACAATAACCACATCCCC 6631 30 100.0 34 .............................. CTATCCTCTGGTATCTTATCTATATTTAAATTAT 6695 30 100.0 35 .............................. AACTTCAAGGGGCAAATTTTTGTAAAGTGAGGTTG 6760 30 100.0 36 .............................. TTGCGTGCTTATGGTTAATAAAAGTTATTTTACAGA 6826 30 100.0 37 .............................. GAACCTGTACCATATAGTATTTTTAAATTTCTAGTTA 6893 30 100.0 35 .............................. AAGTTTTCTATAAAAGTATGTTCAGCACTTGAATT 6958 30 100.0 36 .............................. AAGGTAACTACAAAAGACCCCGTAGTCTGGTATATT 7024 30 100.0 35 .............................. TTCCATTTTGTTCTAGCATCTGCAATCGCTACATA 7089 30 100.0 35 .............................. TACAAATGCAATACAGAATAGTTATAAATATTTTT 7154 30 100.0 37 .............................. AAAGATAATTTAAAGGGGTTTAACGTAATTACTTTAA 7221 30 100.0 36 .............................. GAAGAAAACTCACAGTTTTTAATAAAATCTATAATT 7287 30 100.0 37 .............................. ACGTCTTCTAATAGTCCTTCAAATTCTATTGGCATAA 7354 30 100.0 36 .............................. ATCTTTTTGTTTTTCTTCCGATCTTTGTACTTACTG 7420 30 100.0 35 .............................. TATTCTAACTTCACATCCTTTTAAAGGTCGCCATT 7485 30 100.0 36 .............................. TGGGAAAAGTTACGCACGAAACTTCTTTAATGTCTA 7551 30 100.0 35 .............................. TTTCCAGTGAGCAATAGAAAACAGTACCTTTTCTG 7616 30 100.0 36 .............................. CTTGATTTATTGAAACCATATTGGGAAATGGCGAAC 7682 30 100.0 34 .............................. CTATAAAACAATTGAATCTTTTCTTCTATTTCTT 7746 30 100.0 36 .............................. CACCTTCTTTCTCTTTTGGTATCCATATTTATTCTT 7812 30 96.7 0 ...............T.............. | ========== ====== ====== ====== ============================== ===================================== ================== 29 30 99.9 36 GTTGAACATTAACATGAGATGTATTTAAAT # Left flank : AAGCCATTTAGGCTTAAGGAGAAGATATAATGAGTAAAAAATTTAATTATAATTATGCATTTTTATTTTATGATGTGAAAGAAAAAAGGGTAAATAAAGTGTTTAAGGTTTGTAAAAAGTATTTAGCTCATTATCAAAAATCTGTTTTCAGAGGTGAGATAACACCTTCTAATATAATAAAATTAAGAGAAGATTTAAAAAAAGTAATAGATGAAAGTGAAGATTTTATATGCATAATTAAATTATTAAATAATAAAGTATTTGGAGAAGAAGTGCTAGGAGTAGATATTGAAACAGCAGAAGATTTAATTTTATAAAATTATTTTACCAACTGCTTCGAAAAAATAAAACGGTCAAAAGTGTTGATTTTACTGGTTTTCTATGTAACTTAAACTGAAAAAAATAAGTTGTTAAAATTGGTTGGTAAAAAATTAATGAAAGTGTTTATTTTCAATAGGTTTAGGGGTATAATAGAAACAAGGAATGGCTATTTTACTATC # Right flank : TGCTCTTGCTTTAATTTTTCCTCAGAAATATCTTTATTAAAGAAAGTCAACCATCTTTGAAGTCTATCTTCTTTTAAATTCTTTTCTTCTAGTTTGTTAAATTTAGGAACCTCTATAAAATGAATTTCAACTAAGTCCGTTAACATATAGTCTTTGTATTCATCTTCCCAAAGGTGAAACTCAGTGTGAAATTTATCTAAGTTTATATATTCAAAATCTAGTATGTTTATAGTTATTACCTTTTTAAAATTTCTATTATGCTTTTTTTATTATTAGAACTAATATCTTTAAAATGACTAGTACACTAATTAAAATAAATAAAAATTTTTAAAATGAAAATATAAAATCATCGTTTACCAATAATCAAGCTATATTTTGACAAGTACCTGTTACCCTAGTGAGAAGGTTTATCTAAGAACCTGTTGCTAAAATAAATTATCCATTGTTTTTAGATATGTGATGAGAACTTATATATCCTCCATTTTCACTTTTAGATAAAT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAACATTAACATGAGATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:76.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.50,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [70.0-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA // Array 1 16804-18281 **** Predicted by CRISPRDetect 2.4 *** >NZ_CM003321.1 Clostridium botulinum V891 plasmid p1CbV891, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 16804 30 100.0 35 .............................. TATATTTATTAGGTCGTTTAATTATTGCATCTAAA 16869 30 100.0 36 .............................. TAGTATTAAATAAATTGGTGGCTTGTTTTATATCGT 16935 30 100.0 36 .............................. TCTATTAATGCATTTTCAGCTATCTTTTCTGTTATA 17001 30 100.0 36 .............................. GAAACACAGTTTAAAAACAAATTTGGAAGTTGGAAT 17067 30 100.0 35 .............................. AGCTAAAAAGAATGGTGAATACCTTCCTGAAATTA 17132 30 100.0 36 .............................. GAATTAATAAAATTAATACAAGACAATACAATGGAA 17198 30 100.0 37 .............................. AAATTTGCCATATGCGGTCCCCAAAGTACCCATTTAC 17265 30 100.0 36 .............................. AAACCTACATGATGATATATGGAAAGTAGAGCTTAT 17331 30 100.0 36 .............................. AAGTAAGCTTTTCCAGTAACTCCCCTTACTTTTAAT 17397 30 100.0 34 .............................. TTAGTGCCATAGTTTGTACTCCAAATATCTAAAC 17461 30 100.0 37 .............................. ATAAAAATTTAAGATAAATTTAAGGGAAGACACTAAT 17528 30 100.0 36 .............................. TGAAGCAAGAAGAAAGAAGCGAATTTATAAAAGAGT 17594 30 100.0 36 .............................. TTTGCTTGTCTTTGTTTTTCTCTAACATACTCCTGT 17660 30 100.0 35 .............................. TCTATTAAAGATTTTAAAGCAAGATTTTCGCTTAT 17725 30 100.0 36 .............................. AGGTAAAGAACAAGACGATGAGGGATATTTTAGAGA 17791 30 100.0 36 .............................. TTTGTAACTGTAAAATCATTTAACTTTTTAATATCT 17857 30 100.0 36 .............................. TGTGATAGAGTAGCATTTAAATATAAGGTTCTAGGT 17923 30 100.0 35 .............................. ACATCTAATATAGTAATAGTCTTTTCTTTATCGTT 17988 30 100.0 37 .............................. AGAATTACGAAGACAGTATGAGAATGCTAGAGAACTT 18055 30 96.7 36 ..................G........... TTTGACAAGCCTGTTTTTTTATCCATTTTTGACATT 18121 30 96.7 36 ............T................. GAAATCGGTTGTCCTTTTGTATAATCTCTTAATCCA 18187 30 100.0 35 .............................. TTTTGTTTTGTTCAGTATCTTTTTTTGGAGTTCCT 18252 30 90.0 0 ...............T.T...........C | ========== ====== ====== ====== ============================== ===================================== ================== 23 30 99.3 36 ATTAATAAATAACATAAGATGTTTTTAAAT # Left flank : TATTATATTTTTTTTAAAAGTTGTATTAACAAAACTATATTTGTTATAAATAGGAAAATACATAAGGAAAATGGCAAGGTAACTGCCAAGCTTTAGCTTGTGCAGAGTATTTAGATATAAAATAGCTAAGAAGTATAAAGAGTCTAGTAAAGAAAATAAAATAAAAGTAGGACAAACAGTGTGTTTTTGTAGAGAATAAGGCTTTAAAATATGCATTTTATCAACTTATAAAATGTTAAGTGAAATTTATAACATGAACAATTCAAATAAAATAAAGGATAATGTTCTATATATGATATATTAATATAAACAATAGATAGAATTTCCCCAACCAATTTTGTATAACAACATTAGTAAAACATTGATTATATAAGGGTTTAAATAAGATTTAAGTAGAGTAAAGTTATTTGTTAGAATCGGTTGGGAAAATTCTAGTTGAAATATTGGTATATAAGGGTTATCATATAAATATGAACAATAAGAATGGCATAAATACTATG # Right flank : CCGCAAAGTTAAAGATTAATATATGTAAAGAACTACTTTATAGTAAGGTAGTTCTTTTTTTATTGCGGAGAAATAGGTTGGTTGTTAAATAAAGTCAAGCAAATCTTGAATAGTAATAGTACTATCTAATTCATAAAACGCCCTATATATACTTTCTATATCATCTACATTTATTCTCTTAATTGTTTCATAATAATAATTTTGAACTGTGGCAGGGCGAATTCCTGTAACATCACATAGCCATTTTTGATTCTTTTTATATTTACCCAATAAATCAGATACTTTGATTTTCAATTTCAACAATATCATCCTCCTTATATGTATATTATAAACTATGAAAGTTGTTTATTCAAACAGAAATGAAATAATACTACTTATATAGTTGACATACTACTATAAGAGTAGTATTATATATTCATAAGGTAAATGAAACCAACAAATTCAAAAATAAATAGGAGGTTTTAATTATGGAAATCAAAACAATTTATCTAATAATTCAG # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTAATAAATAACATAAGATGTTTTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:90.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.40,-0.90] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [76.7-76.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA // Array 2 25194-26732 **** Predicted by CRISPRDetect 2.4 *** >NZ_CM003321.1 Clostridium botulinum V891 plasmid p1CbV891, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 25194 30 100.0 36 .............................. TATACAATAATAACTACATAACTCCTGATAGGCATT 25260 30 100.0 37 .............................. TATTCTTACCTCGCAACCTTCGAGTGGTCGCCACTCC 25327 30 100.0 36 .............................. ATTTGGTAATGCAGGTATACAAGTAGTACAACAACC 25393 30 100.0 35 .............................. TGTGTTATTCAAAGCACACCCAAATAGCGAATTAT 25458 30 100.0 38 .............................. TTTAAATTGTTAAAATATTTTTTAAGTTCATTTTATGA 25526 30 100.0 37 .............................. TTAAGTATATTCCATTTTGATGAAAAACAAGCAATAC 25593 30 100.0 36 .............................. CAAGAAGAAATAACTTTTGAAGATAAAGAAGATTTA 25659 30 100.0 36 .............................. CAATGAAGAAATGAAAGCATCCACCAATGAGTATAC 25725 30 100.0 36 .............................. TTGAGTGAAAGATGGAATGTGTTTAAAATAAATGAG 25791 30 100.0 36 .............................. GCAAGGGATTATTATAAGAAAAATAAATGTGATATT 25857 30 100.0 35 .............................. GATATTGAAAGTGGAAGAGTAATTAAAGTTTGGAC 25922 30 100.0 35 .............................. ATTAGTTTACCACACTTTGGACACATTCTCATTAG 25987 30 100.0 36 .............................. CCGATAGTGTATTCTTTACCTTCAAATTCTACTTTA 26053 30 100.0 34 .............................. ATATAATCTTTTTTATGGAGGTGATACACTTGAT 26117 30 100.0 36 .............................. TGTTTAGCTAGGTAGTTTTGATAAACTTTAGTATTC 26183 30 100.0 36 .............................. TGAAATTGAGAATAAGCAAAAATCAATTCTTGTAAC 26249 30 100.0 35 .............................. TCTGTACTCTCTTCTATAGTCATTTTTAATAGTGT 26314 30 100.0 37 .............................. CATTTATATGGTTCTTGCTTGTCCGATTGACTTTATA 26381 30 100.0 34 .............................. TCGTAATTGTTAATTATTATTTCAATTTTCTTAT 26445 30 100.0 37 .............................. TATAAGTATAGTGATTTTAAAAATATTGATGATCTAG 26512 30 100.0 36 .............................. AAAGTAGTTATTTTGAAACTTATAAATACATTAATC 26578 30 90.0 30 .......A.......T..........T... TTGCATATGTTAAAATAGAAATAAATGTAG AAAC [26602] 26642 29 83.3 31 ......CT....T...-...A......... ATATTTAGTTTTAATTCGCAAGGATTAGTAT T [26656] 26703 30 83.3 0 ..............TT..A....C.....C | ========== ====== ====== ====== ============================== ====================================== ================== 24 30 98.2 35 ATTAATAGATAACAAGATTTGTTTTTAAAT # Left flank : AAAGAGCATATAGCTAATGTTCGATTTATAGAAGATATTGATATTGAAGATATTCATGATGATATAGCACAAATAAATAGTCTATTTCCTTACAGTATCATTAAAGATATTGAGGCTAACAAACCAGAGTATTGTGAAGATAGGATATCTTACTTTTTAAAAGAAACTATGCCAATTGGATATGATGATAAAGGATTGTATGATTATGATACATTAGTACATACAAACCATGAGATATATGAATTAAACAATACGAACAATATATATAAAATTAATAATAATATTCTATATTTCTTATAAATTTAGATATATAATAATAGAATTTTCCCAACTAAAATAAATATATATTATTAATTAAAGGCGTATAATACAATACTTTGATAGAGTTTTTGAATTAATTATTTAAAAAATTCAATTTGGTTGGGAAAATATAAGATGAACCGTTGATATATAATGGTTATAGAGAAAATACAAACGATAAAAATGGCTTTAATCCTATG # Right flank : CGAAGTTTTAGATTAAGAAAGGAGGATTTTAAAGATGTTTGATTTAAAAATAGATAATATATATGCACATATAAACAAAGAAGCAAAAGAGACTTTATACCAACATTCTATGCTAACCCAATATTATTACAATAAAATAGATAAAACGCATAATTATACCGAAATATTAACAAAAATGATAAATGAAATACTAATAAAAGAAGATAAACAGTCTAAGGAAACCTCAAAATTTATATCGGATCTAATTATAAGAATGCTATATTATCATGATATAGGTAAGATTGGACTGGGATTTCAACAAAATCGAATGGATAACAAGTTAGATGAAAAATATATAGATTACACTTACCATAGTGAATTATCTGCATTGTTGTTTATAGATATAGAATATAATAATATTAAGGAATATACATTCAGTAATAATAGAAAACAAAATAATCAAACAAAAACTTTAATAAAAGATGTTTTATTAAGACTAAGCTTTTTAATAAAATGCCATC # Questionable array : NO Score: 6.17 # Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTAATAGATAACAAGATTTGTTTTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:86.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.20,-0.70] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-17] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [71.7-80.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA //