Array 1 149269-150777 **** Predicted by CRISPRDetect 2.4 *** >NZ_PQMI01000007.1 Corynebacterium sp. 71B NODE_7, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================= ================== 149269 36 100.0 28 .................................... ATAGCGCTTGTACGGCCTCAGACGTAGT 149333 36 100.0 28 .................................... CGCCTCCGACGGTGGCGTGATGTTCAGC 149397 36 100.0 28 .................................... CTATGGGGTGTGACCGTGAAGGAGTTAC 149461 36 100.0 28 .................................... GGCTAGTCTCACTGTCTCTGCTTGTTCT 149525 36 100.0 28 .................................... ATTGGGCTTTGTTGCCTCCCGCACCCGG 149589 36 100.0 28 .................................... CGCCAACATCCAACCCCTGCAAGCCCGC 149653 36 100.0 28 .................................... GGGATCGACATAGGGCCGCGATGGACCG 149717 36 100.0 28 .................................... ACGATTGGCCGGTCCTCTACCAGTACGG 149781 36 100.0 28 .................................... TTTCGAGGTAGTGACGTGGCCCGGGCAC 149845 36 100.0 28 .................................... AGGCGGTGGCGTACCACAATGCTTTCTC 149909 36 100.0 28 .................................... ACCAGACACCACTCGAGCAGCACCTCCG 149973 36 100.0 29 .................................... TACTACTTCCGAGGCCGTACAAGCGCTCA 150038 36 100.0 28 .................................... TCGCGGCGGTGCACAGCCCAGCGCACCC 150102 36 100.0 28 .................................... ATAGCCAACGTCTCACGTGGCGAGACAA 150166 36 100.0 28 .................................... CTACATCTAGTAGGGCGTCGAGCGTGGG 150230 36 100.0 28 .................................... ACTGTAGCGGGGCTCACGCACCAAGCAC 150294 36 100.0 28 .................................... GTCATCGGGCTGGGCGAATGCCGATCCA 150358 36 100.0 28 .................................... ATCCCAGCCGTAGAACTTCCACTCATGG 150422 36 100.0 28 .................................... TTAGACGGGATACGGTGCTTCGCGCGGG 150486 36 100.0 28 .................................... GGTCGAGGACGTGCACGCTGGGGCGGCG 150550 36 100.0 28 .................................... TGGGTGTGGGAGTGTCCACCGGCGCCGC 150614 36 100.0 28 .................................... AGCGGCGTCAGAGGTGTATTCCGGAGAG 150678 36 100.0 28 .................................... CACTGCAGCGTGGGATACGGCCGAGGGG 150742 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================= ================== 24 36 100.0 28 GAAGTCTATCAGGGGTATATCGAACTGAACCCCAGC # Left flank : CATTCAACAGCAATGGCCAGAGTGTATCGACGGTCTTTCAAGACTTTGCACAGCATTTTGGTTTGTACGTCGAAGGAACAGTGGATCGGCTACAAGTCCCGCGTTGGGAAGGGCAGCTCAGTGCCAGCGAAGGACAGTGAACCGGTGTGGTGCGTCGTGATGTTTGACCTTCCGGTGAAGACCAAAAACCAGCGTAGAGAAGCTAATCGCTTCCGCAACCGGTTGTTCGACCTTGGGTTTTGCCGCGCCCAATTCAGCGTCTACGTTCAGTATTTCCCACTGGCGGCGCGTCTCAGCACGATAGTCAAACAGGTGAAAGGCGAACTTCCCGCAGGCGGAGAAGTGCGTATTTTGTCCGTGACGGACCAGCAGTGGGCAAAGGCGATCCGTTTTTCGAACCACAAGGAACAAGCGGTCGAAGAAATCCCCTCTCAACTAACAATTTTTTAAAAGCGCATGCCGAAAAAGACCCAGTTCAGGCCCTGTTTCTGGGCCTCACT # Right flank : CGAAAATGGGCATGGTGGCGGTCTCGGTTAAAGCCTATGGCGCTGCATCACGCTTAACGGCAGTACCGTTTTCCACGTCCTGTGCTGCGATGATCCTACAACCACAAGCCTGTGGCTTTCTGCAGGATCACCGCATCGCGACCTACCGCGTCGCCTCCTCCAACAGGTACAGCACGTGCTCATAGCTCCGCCCAGTGATTTGCTCCATGCCCAGCTCGCAGGTGCGGTTGGAGGACACATAGGCGTCCACGCGCCCATTGGCTTCGGCCTCGGCCAGCCCGGCGCGCTCGTCGCGGGTGGCGGCGTCGAGAAGCTCGGGGTGGAGCATGCCGCGGTCGCCGGCGGTGCCGCAGCAGCCGGCGCCGCGGGGCACGAAGGCCTCCTCGGCGGCGAAACTGGCGACGCGCACGAGGGTGTCGCTGAGTTCCATGTGGGCCAGCGAGCAGTTCGGGTGCACGGCCACCCGCCCAAGGCGGCGGGTGGGTTCAAGGTGCTCGATC # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GAAGTCTATCAGGGGTATATCGAACTGAACCCCAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [11,7] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-2.70,-1.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [53.3-43.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.01,0 Confidence: HIGH] # Array family : NA // Array 1 60024-62064 **** Predicted by CRISPRDetect 2.4 *** >NZ_PQMI01000003.1 Corynebacterium sp. 71B NODE_3, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================== ================== 60024 28 100.0 33 ............................ CTGTCGATGAACTGGTGGATTACGTAGTTTCCA 60085 28 100.0 33 ............................ TTGTCCCGTTGTCTTGAAACGTCACGCCGCTGC 60146 28 100.0 33 ............................ TCCGGGCAATTTCGGATTCACCGTAGCCCCCGT 60207 28 100.0 33 ............................ TGCCTCATCGAGGTATACGGTATCGCCAGATAG 60268 28 100.0 33 ............................ CTCACGCTCTTCATCTTCAAGAGGGCGCTTCAT 60329 28 100.0 33 ............................ GATGCTGCCCCTCCCACACACACGCGGGAGGGA 60390 28 100.0 33 ............................ GGCTAGAGGGCGCGCCATCCGGCCCGTAGTGTG 60451 28 100.0 33 ............................ GCGATCGAGGCCGTGGGGACCGGCTCGTACTGG 60512 28 100.0 33 ............................ CATTCATGCGATAGGCGTAGAGGGCGATGCCTT 60573 28 100.0 33 ............................ GTGGGATAGAGGCGCGATCGGTCCGGACGATAT 60634 28 100.0 33 ............................ CCGTGAGCGGCTGGGCGTGAAGCCCGATGCGGA 60695 28 100.0 33 ............................ GCTTACGCTTGAGATAGATGGGCCTCCAAGGAA 60756 28 100.0 33 ............................ TAGCTAGATCGTCGATAGGAATACCTGCGGTGT 60817 28 100.0 33 ............................ GAGCAAGCCCAAGAGATTCAAGCGCGTGTTTTT 60878 28 100.0 33 ............................ CTGCCCGATAGCGACGGCCGTAGATCAGTGGGG 60939 28 100.0 33 ............................ TGTGGAGCACCGGCTAGGGGGCGGGGATGATGC 61000 28 100.0 33 ............................ TCCCGAGCCATCTTGAGGGTGCAAGATGGCCGG 61061 28 100.0 33 ............................ CTGGGCATGCAATGTGTGCTATTTTCCCAGCTA 61122 28 100.0 33 ............................ CTCGACTATGAGGAATACGAATACGGCTTCCTG 61183 28 100.0 33 ............................ TTTCGACATGGACGCGTTCCGCCGCCGTGTCGA 61244 28 100.0 34 ............................ ATGCGCCATAGACCGCGTCGGCGTTTTCCTCGAC 61306 28 100.0 33 ............................ GTCCCTGAGCTGCTCTTTTGTCCCCTTGAAGGC 61367 28 100.0 33 ............................ CAGCCTTAGCCATCTGCGCCGCACCATCCGCGC 61428 28 100.0 33 ............................ GCCCGGATTGCCGGGAATACCGGTCTCTTCGCC 61489 28 100.0 33 ............................ TCAGGTGTACGACCAGTTTTCCGGACAGCTCAG 61550 28 100.0 33 ............................ GGAAGTGGTGAACGATGGCGCAGGTATATCGCG 61611 28 100.0 32 ............................ CCATCGCCAGCATGAGCTACGAGTACGCGGTA 61671 28 92.9 33 CG.......................... CTACTCGCCACAAGCCTCGCCGAAAAAGGACAC 61732 28 100.0 33 ............................ TGTGGATACCCTCTGGGGCGCCGTCCACGTCGA 61793 28 100.0 33 ............................ GTCTGACCTGAACAAAGATGACTTTCAGAAGAA 61854 28 100.0 33 ............................ CGTTGCTCGCAGCGGATGCAAACCCTCTATTGG 61915 28 100.0 33 ............................ TTGTGCGGCGACGGCCTGCGATTCGACCGCATA 61976 28 100.0 33 ............................ GAACTATCGAAAAAGGTCCAGCAGGCCGAAGAT 62037 28 92.9 0 ..........................TG | ========== ====== ====== ====== ============================ ================================== ================== 34 28 99.6 33 GTTTTTCCCGCACGCGCGGGAGTGGACC # Left flank : TTTTAGATGGCGGTAAGACAGAGCTATCTGGAGGGTGGCTTGCCGCCAATGGCATCGTATTCAAACGTATCCAGGACGCCCCGCCTGTCAGCGTTGAGATGATGCTTCACGCTAGTAAAGGATGGCAGACCTCCCCAGAGCTTGGAGCATCTGACCATATTCTCGACCGGCTCTCGGATACAGCGCCCGACACGGTAAGAGTAGAAGAATACTTACCTATTGCCGTGGGCATAGCCGTGTCAGGGCGTCCCTTGGCCCAACACGGAGTGGCGCATCTCAAAGGCCGAAAGAGGTTTCTTCCGCGCCCGACATATCCAGTAAGTTTATGGACTCTAGAGGTTCTATCGAGGAGACACCGTGGTTCTGGTCTGTTGGCGGAGGAGGTGACGCGCGGGAAATTTAAGACTGTTGCTCCACCGATCGTAGTTTAGTTCGTTCAAGGCGAATAGAAGTTGAATCTATACGCCGTGTTTGCTCGCTAAACCTGCTGTTCGCAGAGT # Right flank : GCAAGCTCCTGTGTTTACCTAGCAATCCAGTCGAGTTTGCCGAGGTCACCAAAAAATGTGACCCATTGTGGAGCGTGAGGGGCATCGCAGCGCTATGTGTCCATCTGTCACGATTGTGATCAGCTGTCACCTCGTTGAAAGCATGCATGAAGCATCGTTTCCTGAAGCGGTTGTGCCTTGGCAGCGGTGCTGATTTGTCCGCTGTAGCTTGTGCGCCTGTGACAGGAATCGGTTGCTGGGCACTGAAGACTCTTTCTTACTGTGGTCGGGATGCATATGGGCGCCATCAATTACCGACCTAGATCTGAATACCACTTATCTAGCGATGTCCCGATCCAGTTGAGTAGTTTTTCCAGAGCGTCTTAGGTGGAAACTTGACCGCTCCTGCGTTAACGAGTCCGTGGTCGTAGTGATACTTCGTTTGCGCTTCAGCCTTGAGTGCGGCGGGTGCCGTTTTCAGAAGTACTCGAATGGGCGGTAGAAGACATAGATGCGGCTCT # Questionable array : NO Score: 3.24 # Score Detail : 1:0, 2:0, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTTCCCGCACGCGCGGGAGTGGACC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-11.00,-10.90] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [51.7-53.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0.37 Confidence: LOW] # Array family : NA //