Array 1 82069-83424 **** Predicted by CRISPRDetect 2.4 *** >NZ_SORI01000002.1 Aminivibrio pyruvatiphilus strain DSM 25964 Ga0215706_102, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 82069 36 100.0 30 .................................... GGCGAAAAAGGAGCCGCCTCCCGTTGGCAG 82135 36 100.0 30 .................................... AAGACAAACGACATATACGCCGGAGCAATA 82201 36 100.0 30 .................................... GGTCGGGGTGTTCTCCGAGAACTGCAAGAT 82267 36 100.0 30 .................................... TGGCGTACTGCCGGACAAATACCCTGTTGT 82333 36 100.0 30 .................................... CGTAAATGACGCCGACCTGTTCGCGTCGTG 82399 36 100.0 30 .................................... CGAAAGGAGTGATCCCCATGAAACGCCTCG 82465 36 100.0 30 .................................... CAGAAATGCTCCACCATGTAGCGCTGGAAT 82531 36 100.0 30 .................................... CTGCACCAGGACGGTAAAACACAATGTTTG 82597 36 100.0 30 .................................... GGTGCAGGAAAAACGGAGTTGGTGGGCACG 82663 36 100.0 30 .................................... TTGATTATCCTTGGTCTTCGACATTTAACG 82729 36 100.0 30 .................................... GTAAATGTGCGGCTGGACAACGTATCGGGG 82795 36 100.0 30 .................................... ATCGCTCCGGATCTTCGCCGCGTAATCCGC 82861 36 100.0 30 .................................... CATGGAATTGCCCTCCACATATATGGAGAG 82927 36 100.0 30 .................................... TAGATTCTTGACACGCCCCCTACCCCCGGC 82993 36 100.0 30 .................................... CTGAACTTTCCCGCCTCCGCCAAGGTTTGC 83059 36 100.0 30 .................................... ACCCTAACGTGCTTCGCCTGACCGATCCTT 83125 36 100.0 30 .................................... GGTGAACCCGGTGCGGAGATATACAGCGCA 83191 36 100.0 30 .................................... GGACAGGAAGGCGGCACGGAGCCGGGCACT 83257 36 100.0 30 .................................... AGATAGAGGCTCTCAGGGAAGCGGCGAGAG 83323 36 100.0 30 .................................... AAGCTCAGCTTCGACGAGTCGAACCGCACG 83389 36 97.2 0 ............................T....... | ========== ====== ====== ====== ==================================== ============================== ================== 21 36 99.9 30 ATTGTAGCATTTCGGAGTGCGGCAGGGAGCTATAAC # Left flank : GGTACTGCGCTCAACGGAGATCATGGCTGCCAGTTTTTTTACTGCTTGCAGGGAAAAAGCTCCTGCCCTGATACGCTTGCCGGAGCTCCTTCCTCTGACAGAACACCGGTATGAGTGAATGCCGCTTCATGAGGCTGCTCGTATTCTTTGATCTACCGGTAGTCAGCAAGGAAGACAGGCGGATTTACCAGAGATTCCGTAAATTCTTGCTTGCTGACGGTTACGACATGCTCCAGTTTTCAGTGTACAGCAGAATTGTCAACGGGGAAGACGGCGTTGACAAACACTTGAAAAGACTGGGGAAGAATATTCCAGGCAAGGGATCCGTCCGGTTTCTCCAGATTACTGAACGCCAGTATGCTGCAATGAAACTTCTCGTCGGCCAGAGAACAATCAAAGAAAAAAAGGTCGGAACAAGCCAGCTCCTGATCTTTTGAGGCAATTTTTTCGACGATGAAGGGGCTTGAACTTCAGTGTTCAAGCCCCTTCATCGTTAGGAT # Right flank : CCGATAGTACCATCGCCCCTTCAATGAACCCGGCGGCCTTTCCGCAATAAGCTCAGATAGGCCGCCGGGCAGTTTTTGCATTCATTCTCAGTTTCCAAATCGCGGCACGGTCAAAGAAAGACGCTTTTCACGCCGACCTCAAAAAAACGGGATTGTCGCTCCCTTTCTACTGTAGCTTGGAGACGATGACCCTGTTGGTGATGCCCTTTTCCTTTTCCTCCTTGGTGGCCCTGATGATGCCGTAGAGTACGCCGGTTTCGCTTCTGTCCCATGCGATGCCCTGGCCACGGATGTTTTTCGGCAGTATTTCCACCAGCTCGATGACGGAACCCATTTTGGGAAGCCTGCATTTGTAGACTTCCGCAGGGTCGTGGCCCGACAGGTAGAGGAATCCGTCGGCTCCCCAGGAGCCTCCCGAATTGCTCATATCCTCCAGCCGTTCGAGTATTGCCTTGGGGAGGGTCCACGCTTCGAGCCACTGCCAGTTGTCGGCGAACTTG # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTGTAGCATTTCGGAGTGCGGCAGGGAGCTATAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [9,9] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-4.90,-2.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [56.7-45.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.05,0 Confidence: HIGH] # Array family : NA // Array 1 157686-155020 **** Predicted by CRISPRDetect 2.4 *** >NZ_SORI01000005.1 Aminivibrio pyruvatiphilus strain DSM 25964 Ga0215706_105, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ====================================== ================== 157685 36 100.0 35 .................................... CACGGACAGGGCGGTGTCCGTGCGGCGTTCGGCTT 157614 36 100.0 34 .................................... CTCAAAACTACTCCCGCACCGGGGGCACCCGTAG 157544 36 100.0 34 .................................... CTTCCATCCGCATATCTCTTTCTGCCTTTATCTC 157474 36 100.0 36 .................................... GAAAAGCCAGATAAATTTATTGAACGCAAAATACTT 157402 36 100.0 35 .................................... AAGAGAATCCCCCTGCCCCGTTCCGCGCCAGTAGA 157331 36 100.0 35 .................................... TACTCCCACCTATCTTTGGCCACAGACCACCGAGA 157260 36 100.0 36 .................................... ATGGGGGACACCCTCTTCAGCCCATTGACCCAACAC 157188 36 100.0 35 .................................... GTAATCGTCGGGTATGAGCAGGAGGGCCGTTGCGA 157117 36 100.0 34 .................................... TCTCTCCCACGCTCATCGTGTCATACCTGTTCCA 157047 36 100.0 35 .................................... ACAGTGATTCTGTGGAGCCTTCGCCCAGTGTGAAC 156976 36 100.0 35 .................................... ACTATGACGCGAGTTGCCGGGGTCAGTTCCGCCAC 156905 36 100.0 35 .................................... GGATGTGTCGCGGGGCCGCGACCGTGATACCCGGT 156834 36 100.0 34 .................................... TTTCAATCAACGGCGTCAAGGTGCTTGTCTACGG 156764 36 100.0 35 .................................... AGTAGCCTTTCAATTTCCGAGTTTCTGCGCAAGGC 156693 36 100.0 34 .................................... GCCGCCCCCGCTACGCAGTGACGGCCTTTCGATC 156623 36 100.0 34 .................................... TCCGGGCTCCACTGTCCTCCCCAGAAGGCCGGAT 156553 36 100.0 36 .................................... AATTTCTTGTCGTAGGGGCAAAGAACGGCCACGGCT 156481 36 100.0 36 .................................... GGGGGGGAACTGCTGATGACGCTGCTTATCGACGCG 156409 36 100.0 35 .................................... AGGTCTCCGCAGTGCGTGGAGTAACCCTGGCCGAC 156338 36 100.0 36 .................................... GGGAAGCGTCCATGTCGTTCTGTTCGTGTTGAAGTT 156266 36 100.0 36 .................................... CGACGTATACCGACGCAATGGGGCTGCTTCTACAGA 156194 36 100.0 34 .................................... TCTGTCAGGGTATTGGCGTTTTTGTCGTCTTCCC 156124 36 100.0 36 .................................... TCACCATCGATGAGGAGGGTCTTCACGTTAGCACTC 156052 36 100.0 34 .................................... CCAGAGATTCAAGGGCTTTTTCTCTCCGGTTCCA 155982 36 100.0 38 .................................... TCTTCAAAGTTCCCAAACCCACCCCACCATCCCCCATC 155908 36 100.0 34 .................................... ATGGATGTTGAGTTGGATTTTTTGCAGGCACTTG 155838 36 100.0 33 .................................... CCGAGGCGTAGAGGTTCCCGTGCGCCAGGCCGA 155769 36 100.0 38 .................................... GGATAGTGTAATTGATGAGGAGGTGGCGGAATGACGAT 155695 36 100.0 35 .................................... AAGCGGTTAGAATCGCACGTCGTACATTTGTGGGG 155624 36 100.0 33 .................................... AGTCCATAGACTTTTCCGTGTTCTCGCCTCCAT 155555 36 100.0 34 .................................... GCGGCATAGGCTCTTGAGCCGCCATCTCTATCAA 155485 36 100.0 36 .................................... CACTTTTTTTATGAACTTGATAAGCCCGCTAGCCAT 155413 36 100.0 35 .................................... TATCTAAATAATCAATATATCCTCGTAATAATACG 155342 36 100.0 37 .................................... TCTTCTCCACGGAGGATACGCCGGAGACAAGGCAGTC 155269 36 100.0 34 .................................... TTGAGGCCACGGTCCGTGAGGGTGCAAAGAGGTT 155199 36 100.0 35 .................................... TGCAGCCCGCAAGAGGACTCAGCGTAGTGACCCCT 155128 36 100.0 37 .................................... ATCACATTGTCAAGAAAGCGCACAGCTGTTCTGACAA 155055 36 91.7 0 ..............................C.AA.. | ========== ====== ====== ====== ==================================== ====================================== ================== 38 36 99.8 35 CTGCCAAAACCTCTGATGCCGCAAGGCGTTGAGCAC # Left flank : GAAAAACGTCTTCGCAAGGTGGCCAAAATAATGGAAGGCCATGGCCAGAGAATCCAGTACAGCGTTTTTCGGACTCACCTCAGCGACCGGGGCCTGGAACGGCTTCGGTGGGAACTGGAAAAAGTGATGGATCCGAAGGATGGGCTGTTGATCACAGAACTCTGTGACGCATGCGTAAGAAAAATACGGAAACGAAACGCCGAAGAGGCATGGCCTGACGAACCGGAAAAATGGATTGTACTGTAGACCGGTTCAAGCACCTCCGGCTGAAATGGGAGCATCGACGGAAAACAAATCTTCCCCTGTTGAAACGACAGGAAAAATCAAGAGCTCGAACCTTGAAAACTGCTTGATTCTGTCCGGGCAATGACGTAGCATGGTTTCTCAGGCATTAACAAATCCAGGTTTACCCTTGGACGAACTCGTAAGGTACCGCAGGAAATCCACCATGAAACAACATCGGCTGAACATTGATGCCAGGCTGACCCGGCCACTTTGAT # Right flank : TAGCACACCGCCGGCATCATCCTTCACAAAGGGACGGTATTGGTGGAAGACCTGTACCGGGATATCCTTTCTGCCACGAAGCCCCTACACCCGACACCTCTGGGCCGCGCTGCCGCAGCTGAGATAACCCGTATTCCCCGCCAGAAGCAGGAGAATGCCTGGCCCATCTGTTCATGACGAGGCCGGTACTCTCCTGCTTTCCATTTTTCCCTGTACCCAAACCCGCACTTTGGCTGAAAACAGAATAAAGTCAGATTTTGGTCGTTTTTGAGCAATGGTTTTCCGTACTAATATGATGCATCGCGCAGAAACGTTCAAATTTTAGAAAACAAGAGCAGGAAAATCAAGGAGGGTGTTGCAAATGGACAACGCGGTGAACAGTTTCGACATGTGGATTGCCTGCAGCATCATGGTGATCGCGGTAGTTGTGCAGTCGCTCGTCTTTTTTAGAGCCGGACTGAAGAGAGCACGGGAATTGAATATTCCCCGGGAAAAACTGA # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCCAAAACCTCTGATGCCGCAAGGCGTTGAGCAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,9] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-4.00,-7.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [43.3-50.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,1.15 Confidence: HIGH] # Array family : NA // Array 1 954-2 **** Predicted by CRISPRDetect 2.4 *** >NZ_SORI01000007.1 Aminivibrio pyruvatiphilus strain DSM 25964 Ga0215706_107, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ =================================== ================== 953 32 100.0 32 ................................ CCGGATCACGGTTACACCACCTTCAGCACGCG 889 32 100.0 35 ................................ CAGCCGGCGTGTGGACCAGATCGCCGAACAGGTTA 822 32 100.0 33 ................................ GCGGCTTGGTCCGGAGCTTTTGGGAGACGGATG 757 32 100.0 32 ................................ ATGGCGGCCAGGTTCGCCAATGTGACGCAGAT 693 32 100.0 34 ................................ CGTGGGACCGGGAGAAGGAAACTGTCCGCGACAA 627 32 100.0 34 ................................ TTTGCCCTATATGCAAATCGATTGGAGCGGCCAA 561 32 100.0 34 ................................ CTCTACGTAAGACCTTCGGGTATCTGCTGTACCA 495 32 100.0 34 ................................ CGGAGCCCGGCTTCCGCTCCACCGCTCCGAAATT 429 32 100.0 32 ................................ ACCGTCTGGCGGCCATTGCGGTACCGGTCGTC 365 32 100.0 33 ................................ CCGAACGCATCCGCGTCGAAAAATTGAGCTCCT 300 32 100.0 35 ................................ GTGCCGACCATGATCTTGGTCGGGTCCTTCAGATT 233 32 100.0 35 ................................ GCGCGTAATCCCTGGTGTTCTTACGGCGCAAGTAC 166 32 100.0 35 ................................ CCATCGGACAAGCCCAGGTATTCGCGGTTGATGCT 99 32 100.0 34 ................................ CTCCCATTCAATAGTCTTAAGAAGCTGTTCATCA 33 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ =================================== ================== 15 32 100.0 34 GTTTCAACTCACGCCCCCGCATGGGGGGCGAC # Left flank : GTGCGGATATCCTTGTTTCCTCTACTGGCCATAGCTATTCCTCCTTTCGTCATGGGAACAGAATGTATTGCTTCAATGGGCGGAACTTACAGCCCCGCCGCCTTGAAAATGCTCTTGGCAGTCTTGGGGTCTACATCTTTCTCAGGATGAGGAACCGTGATCTTTCCCGGCTTTGTCTTGTGCTTGAAGTAGTGGTGATCTCCCCTGGCACCCAGCAGAAACCAGCCGTCCTGCTCCAGAATCTTTATGATCTCCCTGCTGCTGAAACTTTTCATTCCCCCTCCTCCCCTCGACAATAATATGATAACGCGTGTTAAAACACGTGTCAATCTTTGTGGAAGCCTTTGTATAAGGCCCAATTCATGAAGAAACAAAAATCAAATTTTTGGTCATGACATGGAAAATACCGATACAACCCAGTTTTTTCTTTCAGAAAACCGGGTGTTTTTCGCTCGCATGGGGGGCGACGAGGAGGCGCAGTCTGATCTGGATGCCTGGGC # Right flank : CC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCAACTCACGCCCCCGCATGGGGGGCGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [5,5] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-9.60,-10.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [0.0-35.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.64 Confidence: HIGH] # Array family : NA // Array 1 239365-238222 **** Predicted by CRISPRDetect 2.4 *** >NZ_SORI01000003.1 Aminivibrio pyruvatiphilus strain DSM 25964 Ga0215706_103, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ =================================== ================== 239364 32 100.0 34 ................................ GCCATCGGGGCGATCGTCGGGCGGGCAGGGATCT 239298 32 100.0 33 ................................ ATCGTAGATCTGGCCGACGGCCGGCCGGATACG 239233 32 100.0 34 ................................ TTACGCCGCTCTTCAGTTTGTTCAGTTGCTCCTC 239167 32 100.0 33 ................................ TTCGCCGCGTAGTTGATTTTCGACCGCAGGGCG 239102 32 100.0 34 ................................ TTTTCGGCGATGTGGCGGAGGAGTGGTTCCAGAA 239036 32 100.0 35 ................................ CACGCCAGCGAACGCCGCCGTCGCCATCCCGGAGA 238969 32 100.0 32 ................................ GTTCAACCGCGCCAGGGGCGTGCACCAGGTGG 238905 32 100.0 32 ................................ TACTTTTTCGATATCTACGATCTGCACATCGA 238841 32 100.0 33 ................................ GACGATCCTGGGGAACAAGCTGGAAGCAAGCCT 238776 32 100.0 32 ................................ GGGGTCACACGACTAGCCTCCGGCACCAGTTG 238712 32 100.0 34 ................................ ATCACCACTTCGCGAGACGGGAACCGATGGCCGT 238646 32 100.0 33 ................................ AAAAACCTTCGGGTATTGCACCACCTCCCTCAA 238581 32 100.0 33 ................................ CTCAGGAGCCCCTGGAGGACACAAGTACAAGGA 238516 32 100.0 32 ................................ AGGATCTTCAGGCGGCCGCCCTCCCATGCGTC 238452 32 100.0 34 ................................ GTGAAGGTTTTCGTCATGCTCATGCCGTAGTTCC 238386 32 100.0 35 ................................ CGGATCTCCTGAATCCCCATGCCCTTTTTGTACAT 238319 32 100.0 34 ................................ GCCATCGGGGCGATCGTCGGGCGGGCAGGGATCT 238253 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ =================================== ================== 18 32 100.0 33 GTTTCAACTCACGCCCCCGCATGGGGGGCGAC # Left flank : GGGGGGCGACCGCCGGCAACGGGAACAACGGTGCTTTCAACTCGTTTCAACTCACGCCCCCGCATGGGGGGCGACTTGAGCAGTTCTAACCGCACCGTCCTGGAACTCCGGTTTCAACTCACGCCCCCGCATGGGGGGCGACCATTCCGTCGAGGAGGTCCCGCTCCGTCATCCCGTTTCAACTCACGCCCCCGCATGGGGGGCGACACGCTGTCTTCCGTATCGCAAGATAGAATTGTGGTTTCAACTCACGCCCCCGCATGGGGGGCGACCCGGAAAACACCACCCGCCTCTGGCTGCAGATCGTTTCAACTCACGCCCCCGCATGGGGGGCGACGCCATCGGGGCGATCGTCGGGCGGGCAGGGATCTGTTTCAACTCACGCCCCCGCATGGGGGGCGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNC # Right flank : CGTATCCTTTTCAAATGCTGTTATCGCAATTGTTTAGACCTCTTGTTCCGCGAAACTGCAAAAAAGCATACCTTTTTATGGTTTTATCTTCCGTAAAAAGTCCTAGCAGTTGTCAAGGTCCGGTCCGCGAATACGTTTTTTCTGGAAAGGCCTGAGCCTTGGCATTCCTACTGTCACTATGCCATTTTTGACAGTCTTTCGTGCTTGTTAACTACCCCTTCGCGGGAAAATTTCAAAGCACTATAAGCCCCTGAGGGTTATATGTTTCTTTGGCTCCAACATGCTCGACCCGGCGTTCCCAATTTGCACCGAGGAAGTAGTACCTCAGGCTGTCATGTTCTTGATCGATTTCTTTTTCCAGCTTGTGCTTGAGGTCTGTCCATTGCGCCGGAGTTACCAGGCACTCAAAAACCGAGTTCTGCACCCGTTGTCCGAAGTTTTCGCACTGTCTGGCGACGCGGCGAAGGCGCCGCTTGCCGCCTTCGCTCTCTGTGCTGACG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCAACTCACGCCCCCGCATGGGGGGCGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [5,5] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-9.60,-10.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [58.3-0.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.37 Confidence: LOW] # Array family : NA // Array 2 243936-239528 **** Predicted by CRISPRDetect 2.4 *** >NZ_SORI01000003.1 Aminivibrio pyruvatiphilus strain DSM 25964 Ga0215706_103, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ===================================== ================== 243935 32 100.0 33 ................................ ATGTTTGCCGTGATGGTGGCCGTTTCGCTCGTC 243870 32 100.0 33 ................................ GCGCGGGGGGAAGGTCAACAACCTCGAACGGCT 243805 32 100.0 34 ................................ GGACCCGTTCGCTGTACTTGAAGCCGTTGGCGTA 243739 32 100.0 33 ................................ GATGGTGGAAGCATCTACGACGCTGATGGCAAT 243674 32 100.0 33 ................................ AAGGGCAGGGCGTCCTGGTGGAGGGGCGGATCA 243609 32 100.0 34 ................................ CTATCAGCGGCTCTACTGGGACGCGTGCAGGTGC 243543 32 100.0 33 ................................ ATGTTTGCCGTGATGGTGGCCGTTTCGCTCGTC 243478 32 100.0 33 ................................ GCGCGGGGGGAAGGTCAACAACCTCGAACGGCT 243413 32 100.0 34 ................................ GGACCCGTTCGCTGTACTTGAAGCCGTTGGCGTA 243347 32 100.0 33 ................................ GATGGTGGAAGCATCTACGACGCTGATGGCAAT 243282 32 100.0 33 ................................ AAGGGCAGGGCGTCCTGGTGGAGGGGCGGATCA 243217 32 100.0 33 ................................ GTGGGATGCGGTGCACTCGTCGGTCATGTTTAT 243152 32 100.0 33 ................................ GTCCAGGCGGGCGAACGGTCGTCGCCCTTGACC 243087 32 100.0 33 ................................ CCGGACCTGCATGCACGAGCATGACCTCAAGTG 243022 32 100.0 32 ................................ CAGGCCCCAAGGAGCTTTTTATCGTGCAAGTT 242958 32 100.0 33 ................................ GTACCAGCTGGTGGGGTCTCCCCTGGACTTTCT 242893 32 100.0 33 ................................ GATGAAGCGCTGCACCTTCGAGAGCTTCCTGAC 242828 32 100.0 33 ................................ GTTCCAGCATGTGGCCCTGTCAACCTTTAAGCC 242763 32 100.0 33 ................................ TGGTGCTCTTCCTGATGACGGAACTTGAGAAAC 242698 32 100.0 34 ................................ CCGGGCGGTGGAATTCTATATCGACGAACCGGTG 242632 32 100.0 33 ................................ CCCCAGCACCAAGGACACGGGATATATCACACG 242567 32 100.0 33 ................................ CGCCTGGTGGGGCAGCAGGTCAGTCGTCGTCTC 242502 32 100.0 34 ................................ GATACAAAAACGTCTACTGGGCCACGAAAATGCA 242436 32 100.0 34 ................................ AATGCAGGAAGTGACCGAAGATGCCGTCTGAATG 242370 32 100.0 33 ................................ TTCGACCAGGCTGCAGAAATGCAGGACGCCAGT 242305 32 100.0 33 ................................ GGCAAGGCTGATAGGGTCGGCTTCCTGCCCTGT 242240 32 100.0 34 ................................ TCGGCCCGGACACCACCTGCATGATCCCGGATTT 242174 32 100.0 33 ................................ GTGAGCTGATGGGGGTAGCAAAAGAGGTAAAGG 242109 32 100.0 33 ................................ CTCCCGATGGAGCTTGTCGGAAAGACTGAAAAT 242044 32 100.0 33 ................................ ACCCTTGACAGGGAGATCGGGGATTCCTTCTGC 241979 32 100.0 33 ................................ GTTGACGCCGGGTACCGTACAGACGAGGTGTAC 241914 32 100.0 33 ................................ GATTGATGTTGAGGCCGTCCGCAACGACGCAGT 241849 32 100.0 34 ................................ GGCAGACGATAGAGAGCGCGCGAGAATTGATAGA 241783 32 100.0 33 ................................ AGGTCCGCACTCCTCTACCGGGCACGGGATTTG 241718 32 100.0 34 ................................ GAAAGTGCAGCAGCTTATAGACACGTCCTTCGAT 241652 32 100.0 34 ................................ CTCGGCTGTCGTCACGATTGACGCTGATTGGACG 241586 32 100.0 34 ................................ CTATCAGGGCAGCCAGCGAGGGGGACTTGATCAT 241520 32 100.0 34 ................................ CCGATGTAGCGGCTTTTATTCCGCTCGAAGTCTG 241454 32 100.0 33 ................................ CTCGCCACCGGGGGTATTTTGACCCGGCTGATG 241389 32 100.0 32 ................................ AGGACACAAGTACAAGGAGAGAATGCCAGCAA 241325 32 100.0 33 ................................ TATACCCACCTGTTTTCCAAGTAATAACGTCTC 241260 32 100.0 34 ................................ AATCGCCATGCGCATTTTGTTCGTCACGCGGATG 241194 32 100.0 33 ................................ CGGTTCGCCGCCTCGGGCAGTGCGGCGCGGGGG 241129 32 100.0 35 ................................ CTGGCGTTTTCGCGGATGTCGCCGAAGGAGCAGAG 241062 32 100.0 33 ................................ GCGCACGAGAAGGCAATTGACCTCTGGCGCAAA 240997 32 100.0 33 ................................ TCCATGATTTTGCGCCGGAGGATCGTGGACGGT 240932 32 100.0 34 ................................ CCCTGTTTTATTTCGAGGAGGTGCAAGATGGCAC 240866 32 100.0 34 ................................ GTTTCTGGACGCTGTTTTGGATTGGATGGGTTAA 240800 32 100.0 33 ................................ TGGAGCAGGTGGACCATGACCTGCGCTCGTGTA 240735 32 100.0 34 ................................ CACTATCTTACCTGTTAGGTAAATTCGACGTCCT 240669 32 100.0 33 ................................ ATGGTCGAGCTGGACGTCAACGGCGGCCGTAAG 240604 32 100.0 33 ................................ CAGGGGTTCTCCGGCGTGAGTGCAGAGGACATC 240539 32 100.0 37 ................................ CCGCCGCCGCTTTTTTTCGGACGCCCTTTCTTCACCG 240470 32 100.0 34 ................................ CCCCGGCTTCACGGGGGCTGTCGGAGGGTTTGTG 240404 32 100.0 32 ................................ ATCCTCGACACGCCCATGGATTCCCACTACGA 240340 32 100.0 32 ................................ CTATCCGGTGGCAGGGAAGGAGCGGGCGTCGT 240276 32 100.0 33 ................................ ATAAAACGTCGCACCGTCGTCAGCGGACACCTG 240211 32 100.0 32 ................................ ATCGAACAGATAGACGCCATCCTCGCCGGAAA 240147 32 100.0 34 ................................ GCTGGTCACCGACGCCACCACGGTCATCGTGGAC 240081 32 100.0 34 ................................ GTTCTTCCCGGGCGACAAGGAGCTTGCCGCAGGT 240015 32 100.0 33 ................................ CTTCTCTGGGATATTCTCGAGCGCACCATTCGC 239950 32 100.0 32 ................................ GTTTCGGTGATTTCACGGTAGAGGGTCTCGTT 239886 32 100.0 33 ................................ CGCCGGCAACGGGAACAACGGTGCTTTCAACTC 239821 32 100.0 35 ................................ TTGAGCAGTTCTAACCGCACCGTCCTGGAACTCCG 239754 32 100.0 33 ................................ CATTCCGTCGAGGAGGTCCCGCTCCGTCATCCC 239689 32 100.0 33 ................................ ACGCTGTCTTCCGTATCGCAAGATAGAATTGTG 239624 32 100.0 33 ................................ CCGGAAAACACCACCCGCCTCTGGCTGCAGATC 239559 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ ===================================== ================== 68 32 100.0 33 GTTTCAACTCACGCCCCCGCATGGGGGGCGAC # Left flank : GGGGGGCGACCTGTATCCTGGACACCCACCACCATCGGATCACGTTTCAACTCACGCCCCCGCATGGGGGGCGACGTCCAGGCGGGCGAACGGTCGTCGCCCTTGACCGTTTCAACTCACGCCCCCGCATGGGGGGCGACGTGTCACCCTGTTCATTACACTTCCTCCATGGTGTTTCAACTCACGCCCCCGCATGGGGGGCGACCGGGCCTGACGTGTCCTACGTCGACGTCTTCACGTTTCAACTCACGCCCCCGCATGGGGGGCGACCTCATAATCGCCGTCCGTGTTCGCCCCGGAAAGACGTTTCAACTCACGCCCCCGCATGGGGGGCGACATGTTTGCCGTGATGGTGGCCGTTTCGCTCGTCGTTTCAACTCACGCCCCCGCATGGGGGGCGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAC # Right flank : GCCATCGGGGCGATCGTCGGGCGGGCAGGGATCTGTTTCAACTCACGCCCCCGCATGGGGGGCGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCGTTTCAACTCACGCCCCCGCATGGGGGGCGACGCCATCGGGGCGATCGTCGGGCGGGCAGGGATCTGTTTCAACTCACGCCCCCGCATGGGGGGCGACATCGTAGATCTGGCCGACGGCCGGCCGGATACGGTTTCAACTCACGCCCCCGCATGGGGGGCGACTTACGCCGCTCTTCAGTTTGTTCAGTTGCTCCTCGTTTCAACTCACGCCCCCGCATGGGGGGCGACTTCGCCGCGTAGTTGATTTTCGACCGCAGGGCGGTTTCAACTCACGCCCCCGCATGGGGGGCGACTTTTCGGCGATGTGGCGGAGGAGTGGTTCCAGAAGTTTCAACT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCAACTCACGCCCCCGCATGGGGGGCGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [5,5] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-9.60,-10.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [30.0-1.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.37 Confidence: LOW] # Array family : NA // Array 3 246948-244034 **** Predicted by CRISPRDetect 2.4 *** >NZ_SORI01000003.1 Aminivibrio pyruvatiphilus strain DSM 25964 Ga0215706_103, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 246947 29 90.6 33 ---............................. CTCCAAGTGGTGGCAATGGTAACCGTGGTGGAG 246885 32 100.0 35 ................................ CCCGATCGAACGTGGCACGGTATCAGTAAATCATG 246818 32 100.0 34 ................................ CGTGGCCGAAGGTGAAGCATCTCTACGTCAAGAC 246752 32 100.0 35 ................................ CCAGAAGGCTGCTGGGCCTCAGGGTCAACGCCAGG 246685 32 100.0 33 ................................ GAACTCCTGGCCCATCGTGCCGGCAGCAGGATC 246620 32 100.0 33 ................................ GTAGGGCGCGGCTTTTTCGACCGCGATGAAAAT 246555 32 100.0 35 ................................ CTGTGCGGTAGAGCTGCCATGATCACCGTCAATGT 246488 32 100.0 33 ................................ ACCGCTCTCGCCACCACGGGGGGCAACGACTAC 246423 32 100.0 34 ................................ TACCAGTCGCTGCGCCTCATCCAAAATCTTCCTC 246357 32 100.0 34 ................................ GGTGCTGGAACCGCTGGTCAGGGAGCTCTACGTG 246291 32 100.0 34 ................................ CGCCCGGATGGTTTTACGAGGAACTGACGGTCCT 246225 32 100.0 34 ................................ GCTGTGTCCTCCACTTCGCCGGGCTGGTCACGAT 246159 32 100.0 33 ................................ CCTCACGGTGCAGCCCCTTGGGGCGGGTGCGGG 246094 32 100.0 33 ................................ CTGCGAGCCGGAGATACCCCGGCTGTCCTGATG 246029 32 100.0 32 ................................ GGAGCAGCTACCAAGGCAGGAAAGAGGTTTTG 245965 32 100.0 34 ................................ TCCCGAGGGGCTCACCGTCACCGTCGCCGTTGAG 245899 32 96.9 34 ....T........................... TCGTTCGTCTGATCACAGGAGCAAGCCTGACGGA 245833 32 100.0 33 ................................ CGAGCAGTATTTCCACCTCACGCAGGAGGTGGA 245768 32 100.0 34 ................................ TGCGGTGCCCGTACCCTTCGCTGGCGGCAATCAC 245702 32 100.0 33 ................................ CCTCGAGGACATGGAGTCACCAGCCACTTTGGA 245637 32 100.0 33 ................................ GGACACGGTCGAGTGGATGATGCCCAGCTTCAT 245572 32 100.0 33 ................................ GAGGAGTGGGAGCGGCGCCAGGCCGCGGAGCTG 245507 32 100.0 34 ................................ CCGGGTGGTGTGGGCCTGCCCCGTCTCCCTCAAG 245441 32 100.0 33 ................................ CCATCCTTTCCGCGGCGGCGAAGAGGAGAACGT 245376 32 100.0 33 ................................ CGTCCTCGCCCAGGCTTCCGATCACCTCGTCGA 245311 32 100.0 35 ................................ GCGGCGCCGAACGACGTCCGCACCTCCCTGGAACG 245244 32 100.0 33 ................................ CGGGGAGCGGCCGGCTTCGGCTCGACGGGAGTG 245179 32 100.0 34 ................................ TGATGATGTTGTCGTTCTTTTCCTTTGCCATGGT 245113 32 100.0 33 ................................ GAGTTTGTCGCCGACACCGTATTTATCACGAAT 245048 32 100.0 36 ................................ CTTGCTGGCCTTGCCGATCAGCTTGTACTTAGGCAT 244980 32 100.0 33 ................................ ACACGTCCCATTGATATTTCCCGTTCCTCTGCC 244915 32 100.0 35 ................................ CGGGTGCCATAGTCCGGGTCCGCTGGGCATGCTCA 244848 32 100.0 34 ................................ CTCCCATTCAATAGTCTTAAGAAGCTGTTCATCA 244782 32 100.0 33 ................................ CGGGCTCCACAGCCTGCGCTTTCCCGTGTTCTC 244717 32 100.0 32 ................................ TTCTCCATACCTGCCCCTCACTGCCGTTCGGG 244653 32 100.0 33 ................................ CTCCCATGATGTGATGCGTTCCCAAAGACCTGT 244588 32 100.0 34 ................................ TGTTCAGCTGCCTTTCGTACCCGCGCCCGGACTG 244522 32 100.0 33 ................................ AATTCCAGTGTGTCGTGGGCATTGCGCCATTCG 244457 32 100.0 33 ................................ CTGTATCCTGGACACCCACCACCATCGGATCAC 244392 32 100.0 33 ................................ GTCCAGGCGGGCGAACGGTCGTCGCCCTTGACC 244327 32 100.0 33 ................................ GTGTCACCCTGTTCATTACACTTCCTCCATGGT 244262 32 100.0 33 ................................ CGGGCCTGACGTGTCCTACGTCGACGTCTTCAC 244197 32 100.0 35 ................................ CTCATAATCGCCGTCCGTGTTCGCCCCGGAAAGAC 244130 32 100.0 33 ................................ ATGTTTGCCGTGATGGTGGCCGTTTCGCTCGTC 244065 32 93.8 0 ..............................NN | ========== ====== ====== ====== ================================ ==================================== ================== 45 32 99.6 34 GTTTCAACTCACGCCCCCGCATGGGGGGCGAC # Left flank : | # Right flank : NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACGTTTCAACTCACGCCCCCGCATGGGGGGCGACATGTTTGCCGTGATGGTGGCCGTTTCGCTCGTCGTTTCAACTCACGCCCCCGCATGGGGGGCGACGCGCGGGGGGAAGGTCAACAACCTCGAACGGCTGTTTCAACTCACGCCCCCGCATGGGGGGCGACGGACCCGTTCGCTGTACTTGAAGCCGTTGGCGTAGTTTCAACTCACGCCCCCGCATGGGGGGCGACGATGGTGGAAGCATCTACGACGCTGATGGCAATGTTTCAACTCACGCCCCCGCATGGGGGGCGACAAGGGCAGGGCGTCCTGGTGGAGGGGCGGATCAGTTTCAACTCACGCCCCCGCATGGGGGGCGACCTATCAGCGGCTCTACTGGGACGCGTGCAGGTGCGTTTCAACTC # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCAACTCACGCCCCCGCATGGGGGGCGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [5,5] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-9.60,-10.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [0.0-0.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.78 Confidence: HIGH] # Array family : NA //