Array 1 87140-91548 **** Predicted by CRISPRDetect 2.4 *** >NZ_QHHS01000003.1 Vibrio vulnificus strain 97U1087 contig03, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 87140 28 100.0 32 ............................ GATAGACTTAAATCCACCAGATTGACGTCGCT 87200 28 100.0 32 ............................ GTGTCAAGGTTTCAGTTTCGCAGGTAAACAAC 87260 28 100.0 32 ............................ TTCACCGAGTAGGTCGACGTTGACTAGGTTTA 87320 28 100.0 32 ............................ TCATATTTAATAGTCGATTTGAGTGTCAAAAA 87380 28 100.0 32 ............................ TTACGGTGTTGTTGAGGCTGTTGTTAAACTCA 87440 28 100.0 32 ............................ TACACAGTATTATTCCAGTGAGGTTGATAAAT 87500 28 100.0 32 ............................ TTAACCGAAGACCGTTCCAATCAAACAAAGGT 87560 28 100.0 32 ............................ GACAGCCTTTTGTAACATCGTGGCTGTGATTT 87620 28 100.0 32 ............................ TGAAATTTGCCGACGTTTTCAAACGCTATGGC 87680 28 100.0 32 ............................ TGTAGTCGCTCAGGTAGGTGTTCATAGTCAAA 87740 28 100.0 32 ............................ ATTAACTTCTAATCTAGCGTAAATTGGTTGGT 87800 28 100.0 32 ............................ TTACCACAACGAGGTTCACCGACCCTCACACG 87860 28 100.0 32 ............................ AGTGACAGAACAAACACGAAAGGAAAGCGTTC 87920 28 100.0 32 ............................ TCACAGTGTTGTCGAGGCTGTTGTTAAACTCA 87980 28 100.0 32 ............................ GAAAGCCTCGAGACGATGTATAACATGTACGA 88040 28 100.0 32 ............................ GATAATCCTTGCGCTATGGATTACACGCCCTA 88100 28 100.0 32 ............................ TAAACTGGCGACTGATGCAGCTTACGGCTATG 88160 28 100.0 32 ............................ TCGCAGTGTTGTCGAGGCTGTTGTTAAACTCA 88220 28 100.0 32 ............................ ATCTGCCGTGCTAAATCACCGATTGGTTTAGA 88280 28 100.0 32 ............................ ATGTTTTTTGGGACCAACCAATTTACGCTAGA 88340 28 100.0 33 ............................ GGACAGATTTTTTATCATTCATCGCACTTAGCG 88401 28 100.0 32 ............................ GTTCCAATCAAACAAAGGTGAGTCTATGAAAT 88461 28 100.0 32 ............................ TTGAAGAAGAACTGGAAGAAGAACTTTCCGTT 88521 28 100.0 32 ............................ TCGCAGTGTTGTCGAGGCTGTTGTTAAACTCA 88581 28 100.0 32 ............................ AACACGAAAGGAAAGCGTTCATTAATCACATA 88641 28 100.0 32 ............................ ACTAAGCACACGCATAGCTCTATAAGCGTTCA 88701 28 100.0 32 ............................ GTTAAGAAAGTTGTAAACCATTTCCACAACAT 88761 28 100.0 32 ............................ TTTTCAAAGCATTCTTGAAAATCTTGTTGTGC 88821 28 100.0 32 ............................ ATGATAGCGTGGATTATTACAGTGACGTGCTG 88881 28 100.0 32 ............................ TTTTCAAAGCATTCTTGAAAATCTTGTTGTGC 88941 28 100.0 32 ............................ ACACTACCACGTCCACCACGTCCACCACGTCC 89001 28 100.0 32 ............................ AAACTCGCGGATATTCACAAGGCGACGCAGCT 89061 28 100.0 32 ............................ TAAAACCCATCAGGTGTGTTAACGTCTACCTT 89121 28 100.0 32 ............................ GTAAAACCCATCAGGTGTGTTAACGTCTACCT 89181 28 100.0 32 ............................ TCAGAGTTGGTGAATTCATCATACTCCCTGGT 89241 28 100.0 32 ............................ TTACCGCAACGAGGTTCACCGACCATTACACG 89301 28 100.0 32 ............................ AGCATCACCAGCATCACCAGCATCACCAGCAT 89361 28 100.0 32 ............................ AACGAAGCGTGCCTGGATGATTAACGGCACCT 89421 28 100.0 32 ............................ TGCTCCATCAGGTATTTGCAGTTTACGTGTGG 89481 28 100.0 32 ............................ AGATCCAGCAATACGCCGAAGCCATCATGTAC 89541 28 100.0 32 ............................ TGAACCAGCTCCCCAATCGGCTGGATCGAGAT 89601 28 100.0 32 ............................ TCACAACGCAATCGGACGAACCGCCGCAAGGT 89661 28 100.0 32 ............................ TTTATCGTTTACCGGATAAGCCAACAGTCGAG 89721 28 100.0 32 ............................ GTTAAACCTGCCATTGTGAAGCTCTACCGATT 89781 28 100.0 32 ............................ TAAAACTTGCGCAATTTGTTCCTGATCGATAC 89841 28 100.0 32 ............................ AGTAACAAAATACACCGAGGCCATTAGCTAGA 89901 28 100.0 32 ............................ ATTAACGACTTGCCCGAGCCTAGCTTGCCAGT 89961 28 100.0 32 ............................ ACGCCGATTTGGTCGCCATTGGTCGCGGAAAT 90021 28 100.0 32 ............................ CTCAAGGCGAAGGCCACGAAGAGCCAACTCTT 90081 28 100.0 32 ............................ ACTCGTGAAATGGTCGATAAAAATATTTTTAT 90141 28 100.0 32 ............................ GTGAAGAACTGATGTGTGCTGAGATGGTGTAT 90201 28 100.0 32 ............................ TGCCGCCAATCGAAAATGCTTGTTAGCCCACT 90261 28 100.0 32 ............................ CGTCACATTATCAATCTGGAATTGCAGGTTCT 90321 28 100.0 32 ............................ AGCCCAATCAGTGACGTCGGTGTGCAGATTAA 90381 28 100.0 32 ............................ ATAATCACCCTTCTGGACTGTGTACCCCTAGC 90441 28 100.0 32 ............................ CTAACGGATACCCCTCGGCGAGTCTGGCGCGG 90501 28 100.0 32 ............................ ATCATCGCACCAAAGCGCTACCACAAGAAAAC 90561 28 100.0 32 ............................ CGCCAGTCCAAATGCCAGTATACGTGCGCGTT 90621 28 100.0 32 ............................ TTTTGAAAGGTTACTTTGCAGATTGATCTTTT 90681 28 100.0 32 ............................ GCACTCAAATCAAGCGTCGGTGACAACTCTGC 90741 28 100.0 32 ............................ TTGAGGGTCAAATTGGCGAAGGGCAACTTGCA 90801 28 100.0 32 ............................ ACTGGCGATGGCCTGTTGTATTTCTTGCTCTG 90861 28 100.0 32 ............................ AAATCAACGAAGCATAGCTGCTTTTACTTCAA 90921 28 100.0 32 ............................ AACTGATCGAGGTGATGAGAAAGTTAGAGGTT 90981 28 100.0 32 ............................ TCAACAAGTGCTTGTGCCACTGGCGGACACAC 91041 28 100.0 32 ............................ TTGTTACGGTCATAGATTCGGCTTACTGAATC 91101 28 100.0 32 ............................ CTTAACGGGGCGTTAGATAACAAGACATTTAA 91161 28 100.0 32 ............................ TCTACTTATCATCCTTTAAACGTTGTTCTAAA 91221 28 100.0 32 ............................ ATAAAATCCAACTTCATCACACCAGTGCTGTA 91281 28 100.0 32 ............................ GAGACATGGAAGCCTGAAACCATTCTGTGCCT 91341 28 100.0 32 ............................ AGACGGGTTTCCTGCCACCGCAAAACGCATCG 91401 28 100.0 32 ............................ GTTTGGCGAAAGCTATCACTACTCAAATAGGT 91461 28 100.0 32 ............................ GTTGTCGCGTTGCACTCGGCACCAATCGAGGA 91521 28 96.4 0 .....................G...... | ========== ====== ====== ====== ============================ ================================= ================== 74 28 100.0 32 GTTCACTGCCGTATAGGCAGCTTAGAAA # Left flank : GATGTAACTTACGTAAGCTTTGTACGCAAGCAGGTGAAATCGCCCGAACGAATAGAACGGGATATGCAGCAAAAAGCTGTCCTATGGGCAGCAAAATCCGGCAAACCGCTGGTGGAATGTTTAGCGGATTTGCAACAAAGCAAGCCGACAGCATTGTGCTCTTTGCCGTTTATTTACTTGCATAGCCAGCAAACCAAGCAGCGCTCACCAGACAAAAACAGCAAGTTCCCGCTGTTTATTGAGATGCAGCAGCAAAGCACATCACAAGATGGGAGCTTCGATTGCTATGGTTTGAGTAGCAAAGCGAATGGGCAGTCAATGTTGGCTACCGTACCGCATTTTTAAAATGAACGAAAAAGGGTAGTTTTTACCCTTTATTTTTGCTCTTTAAAAATGTGCTTTAAATACAAATGGTTGCAATAGGTGGCTTTTAACAAGGTAAAAAGATGATTTTTACTCTAACAGCCTGTTGCAGCTTATTTTTATCGCTTTATTCTATT # Right flank : AATAGTAGCGTTGTAACATGAGGAGATACTATCAAGCGTGCTAAATATGACCCTATTACCGAGCAGTTAACTACTGTTCTGAACGGTTAATAAAGATTTATTCATCACTGATGAAGTTACGCGTTAGTAAGATTTTCTATATTTTTTAGCCAAGTATCAAACAAAGGGCATTTCTCACGCATAGTATCTAGGCCCACTTCTAAAGCTGCCAAAGTTCCTAAAAGTGGTTTTTCATAGCCTAAAATATGTTTTTCGATGCGCTTACTTGGTGCTGTTTGCGGGCTGTTGTTGATATGTTCTGGTGAGTCGAAGCTGTTTGCGATCTCGGTAAAGGCCGTTTCCAATTCTATTTTATCCATCCCTTGAGCCATCTTTGTCGGATCGCTGAAGAGCAGTGCTTCAAACTCGTACATCTGCACGTAAGGGATAAACCGACGCATAGCGTTCGCACCGATTTTCTCAGTCAATTTTTCAGCGAATGCGTTTTGTAGTGTTTGAGC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTATAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: F [matched GTTCACTGCCGTATAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [71.7-60.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //