Array 1 10842-5869 **** Predicted by CRISPRDetect 2.4 *** >NZ_QUEZ01000022.1 Clostridium sp. AM51-4 AM51-4.Scaf22, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 10841 29 100.0 32 ............................. TATTATGGTATAGACCCAAATAAAGAATTACA 10780 29 100.0 32 ............................. TTTGTATGTATTTCTTTTTGTCAAATGCCATT 10719 29 100.0 32 ............................. GTGATCCCGCTGGACTCGGACAAGCTTGTTGT 10658 29 100.0 32 ............................. AACGGTACCGTCAATCCATTTAAACTCAGGAA 10597 28 96.6 32 .................-........... AAGGGGCCGTGACCGTGTAATTTTACACGCTA 10537 29 100.0 32 ............................. TATCTGGCTTATCTGTATCCGGTTATCCGGTT 10476 29 100.0 32 ............................. CTCGTACAACCAATACAGAGCGTGGTTCTGGT 10415 29 96.6 32 ............................C CCCATAGCAACGCAAAAAAGCCTATAAAAGCC 10354 29 96.6 32 ............................C GATTGTACACCATGTTAGTTATGTCTAACTAT 10293 29 100.0 32 ............................. CATAATATTTTTTATGTTATCTCAAAATATTT 10232 29 100.0 32 ............................. GTTTCGCTGATAGTCGGCTCTTTTGCATTCTT 10171 29 96.6 32 ............................C TCATAAAATGCAGTCAGAACAGCCTTTGTGTC 10110 29 100.0 32 ............................. TTAGAGCAAGAGCAGAAGAAATTTGTCCAAAC 10049 29 100.0 32 ............................. GATACTGTCACCCTGTTCCACCTGGCGATTAG 9988 29 100.0 32 ............................. ACACACCCCCTGACATTGTAGGATAGAGATCA 9927 29 100.0 33 ............................. GCCATTCTCCAGGCATTAACTGCTGCTGTCTTA 9865 29 100.0 32 ............................. AAGGACTTTGATTTTTAGACCTGTAGAAATCA 9804 29 96.6 32 ............................C TGTACAAACAACATCTTCGTCTAAATCTATAA 9743 29 100.0 32 ............................. AATACTTGGTATTAAGGTTTGGCATTGCAAAT 9682 29 100.0 31 ............................. CCGCAGTATTTCTAAATGCGGTGCAATTGAT 9622 29 96.6 32 ............................C TGGTCAAATGAGCATAATGGATTTTCCAGAAG 9561 29 100.0 32 ............................. GATGAAAACCTGTAAAAGCTATCCCGCATTTA 9500 29 100.0 32 ............................. CATCTGTGTTTCACTTGGCATATGTCACTTCC 9439 29 100.0 32 ............................. GGTATGAGTTAGGGCGTGATATGGTTAGGGAT 9378 29 96.6 32 ............................C ACGGGATCGTATCCAGATAATAAAAAAATATG 9317 29 96.6 33 ............................G TTCATCCACAATTGCTTTTCTATACATTTTTTC 9255 29 100.0 32 ............................. TAATTTGTCTAGACCATTTAAAATACAAGAAA 9194 29 100.0 32 ............................. CAAATTAGAATATTTGAAAAGCTATACAAGAA 9133 29 100.0 32 ............................. AGTTTCTTTTAAATTGTAAGGACAAGATAATT 9072 29 100.0 32 ............................. TATAAAGATACAAAGTTGAACGCACAAAAAAA 9011 29 100.0 32 ............................. GTATAAAGTACCATGTAAAGGGTTTAAAAGGT 8950 29 100.0 32 ............................. CACTTTTTGAAAGAGCAAAATCGTTTTCTATT 8889 29 100.0 31 ............................. ATTTTTGTACTATCTCAAATTATTTTAGGTT 8829 29 96.6 32 ............................C AGAATTGTTTCATGTAAAACATTATGGAAAAA 8768 29 100.0 32 ............................. ACAGGTTCATTATTGTAAATTTGCTTCCATGC 8707 29 100.0 32 ............................. AAGTACAGTGTGCGCTTTACTCAACGCCAAAC 8646 29 100.0 32 ............................. ATTGGACAGATTTTTATTCTTTGACGCTAGAA 8585 29 100.0 32 ............................. GATATACCTATAACGCCATATAAGGACTTTTA 8524 29 100.0 32 ............................. TGGATTGGCGATGATTGGAGAAGAGTAAAGAA 8463 29 100.0 32 ............................. TATGAGAAATAATACGGAAATTTTTTGAAACT C [8458] 8401 29 100.0 32 ............................. AGCAAAAAAAGGGATACAAAAAAGCTGTATCC 8340 29 100.0 32 ............................. AAAACGGAATATATTAACGAAAAATAAATAAA 8279 29 100.0 32 ............................. TGATTGACCTGTTTGATTCACAAGCATTTCGA 8218 29 100.0 32 ............................. GGGTCTTACTAAGCTGTTTGAAGTATATAGAA 8157 29 100.0 32 ............................. TATGGGAAATGATACGGAAGTTTTCAGAATTT 8096 29 100.0 32 ............................. ATATTTGACAACTATACAGACGTCAATGATTT 8035 29 100.0 32 ............................. TACTTGTTGCTGTAACTGTAATAGCAGTTGAC 7974 29 100.0 33 ............................. TAAATGTAGTATCCGTAGTGCCTTCAACACTTG 7912 29 100.0 32 ............................. AATTCCCCCTAACTCAGAACACGCAAATTCGC 7851 29 100.0 32 ............................. CTCATATTATAAACCTCCTACTGATTTAATAA 7790 29 96.6 32 ............................C AATTGTTCCAGGATATCCTCGATCTACTAAGT 7729 29 100.0 32 ............................. TGTAGAGAAAGAAGTTGAACAGTGCGAAGAAA 7668 29 96.6 32 ............................C CCAATACAACTCTTTATACGCCGTTTAAAACC 7607 29 100.0 32 ............................. TTGGAATAACAAGAGAAAGAGTTAGAATAATA 7546 29 100.0 32 ............................. GCTCAAGATCCTGTTGCCTGTGCTTCTGATCG 7485 29 96.6 32 ............................C TCCGCAGTTGCGAACTTTGACAACAAAATAAA 7424 29 100.0 32 ............................. ACTTTGTGATATAATTAGAGCCACCACCCTGA 7363 29 100.0 32 ............................. GATATATTATAACTTTTTTTGATTATTTTTCA 7302 29 100.0 32 ............................. TGTGCTGCGTACTTTCTCAACGCAAAATGTCA 7241 29 100.0 32 ............................. CATCAGGTGGTTGACGGTGTTCTGAATTTTTT 7180 29 100.0 32 ............................. AGCATAAGAAAACATATAAGTCAAGGGTAATT 7119 29 100.0 32 ............................. ACGGCCGTTACATTTTGAGCGTTCCCGATCTG 7058 29 100.0 32 ............................. TGTAGAAGGCATAGAGGCTATCAAAGTATGGG 6997 29 100.0 32 ............................. CCCATATAAATAGGTACTTGGTTCATCTACTA 6936 29 100.0 32 ............................. TGGAGAAACCTTCCGGACCAAAGCGGAACAGG 6875 29 100.0 33 ............................. AGATCTGGTATCTGTAGTGGGTGGGATGATGGA 6813 29 100.0 33 ............................. ACAATTCAGAAAATCCTTGCGTATTCGGTGAAA 6751 29 100.0 32 ............................. GAGTTAGGAATTGAAACACCAGATACATTTGA 6690 29 100.0 32 ............................. GGTTACAGATTAATTTGGATAATTGTACCGAT 6629 29 100.0 32 ............................. GGCGACTTGGAATAGTGGATTAGAGAAAGACC 6568 29 96.6 32 ............................C GAGCTCTGGAAACAGGCAGCCACGCTGATGCG 6507 29 100.0 32 ............................. CAATGCGCAGATGTCTACCACGGCAATCCGGA 6446 29 100.0 32 ............................. ATCTCTCATAATTTCGCCTTTCTTTTGCACCG 6385 29 100.0 32 ............................. GATCCGATTAAAATAAAATCAATTAAGCCGAA 6324 29 100.0 32 ............................. ATGTCTCTAATGACTGGTACAAGGACGGAGAA 6263 29 100.0 32 ............................. GTGCCTGCAGGAACATAGCTGGAACGCTCTCT 6202 29 100.0 32 ............................. ACAAGATCGGGAAATTTCAACAGCGTGCAGGA 6141 29 96.6 32 .....................A....... GATATCAGCAGATTTAAGAATACCGGGGACAA 6080 29 93.1 32 .....................A......C AGGCGGGCGGCAAGTTCTTTTGCACATGCTTC 6019 29 96.6 32 ............................C AAGTTAAGCCCAATCGACGTAATCACGCCGTC 5958 29 100.0 32 ............................. GGCATAAGCCGGGAACATGCCCATAGGGGACT 5897 29 86.2 0 ...........A..T......A......C | ========== ====== ====== ====== ============================= ================================= ================== 82 29 99.1 32 GTATTCCCCGCGTGAGCGGGGGTGAACCT # Left flank : AGGATGAGATAATAGAAGTCGGTGCGTTAAAAATAGAGGCAGGCACTGTCACAGAAGAATTTTCTATGCTTATCCAGATAGAAGGTGAAATTCCAATAGAGATACAAAAACTGACAGGCATTACAGAACAGGAATTGCAAAGTCAGGGGAGACCACTGGACGAAGTACTTAATAAATTGTTTGAATTTGCCGGAAACAGAGTTATTATAGGACATAATGTTATGTTTGATTATAATTTCATCCGCATTGCCTGTCGGAAACTGGGAATAGAAATGCAACTGGGAACTGCTTCCAAAGATACATTGGCATTGTCGCGGAGAAAAATAAAGGGGGTGGGAAGTTACCAGTTGGAAGCACTTATGAAGCATCTGGGATATGAAGTTTCAAATGCACATAGGGCGTTACCAGACTGTTATCTTACATATCAGTTATATCAGAAGTTAAATGAAATGTGAAAATGGGTGTTGGAAAAAGTGAGATAAAATAAGGCTTTTTTTAGT # Right flank : CATATCATGAAGGTGTACAGAGTCCGCAAGCCGTATTCCCCACATAAACAAAGCAACATCTAATTGCCCAGTCTGTAAAATTTAAGCATTTCTTATGTGCAGATGCTCTTTGTAAAAGCAGCATTAATCTCTTGACAAACCAACTCAATATTGTTAGTGTATGGGTAGACAAAAGAGAAGCTTATCTATAGTCCTTGCGTACGCAGGGATGCTCCCTGATTAAATTCCAGAGATATAGTATTCCCCGCATCCGCGGGGCTAAAATCAACAAAAAAAAGCAAAGTCTACAAAGTTGTATCTCTATCCAGCCTTGACGCCCCCAGCCTGCTGTGATAAAATCAATTTAGTGTTTTAGGAGAAGTGGCGAGAAAATCTGCCGTGAATGTGCGAGCTGCCAAGCCTTTAATAAGGCCGGCAGCTCTTTTGGCATTGTTATGCATCCTATGAAAATTGCCAGGGGATATGTATGGGAGAAAACGGACAGAAGAAAGTAATTGAAA # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTATTCCCCGCGTGAGCGGGGGTGAACCT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,4] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGTGAGCGGGGATGAACCG with 96% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.20,-13.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [10-11] Score: 0/0.41 # AT richness analysis in flanks prediction: R [55.0-73.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.14 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //