Array 1 34417-34687 **** Predicted by CRISPRDetect 2.4 *** >NZ_BKQT01000014.1 Acinetobacter bereziniae strain TUM15358 sequence014, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================== ================== 34417 28 100.0 33 ............................ TTTTATCTCATTTATCTTTTAAAAGATATTGAT 34478 28 100.0 34 ............................ AGTGATAATGAAAGCTTGCGCAAGTTCTTCATGT 34540 28 100.0 32 ............................ TTGCGGAACTCTAACACCTAAAACTTCAATAT 34600 28 100.0 32 ............................ TCATTGATGTTAAAGAGGGTTACAGTCCAACA 34660 28 92.9 0 ..C..................C...... | ========== ====== ====== ====== ============================ ================================== ================== 5 28 98.6 33 GTTCACTACCGCATAGGTAGCTTAGAAA # Left flank : TTCCAGAAACAGACTTGGAATCATACATAATTCAAAATTTTATTCTTATAAAAACAATAAGCACTATTTTTGATGAAATTTACGTTATAGCACAAGTTTTGTTGAACTTTAACATCATATAAAAATGATCTTTTTTAGCAGTTTATTGAGCTGCAAAGGAAGTATGTATTATCGTTTGCAAGATAAATTAAATTTTAAATATTTAATTGATAAATAAATTATTTTATATGAGGTATGTCGTATGATTCTGAGGAGTGAATCTATTAGAGTTTGTATTATATACTGCTATAACTTGTTGCTGATGAGGCAAAAGTGAACAATTTAGGGAAATATGCTTTTAATAGAATTACGATTGTTCAAATATTTTAACCCAATATTTTTTTACTCTTTAACAACTGAATAAAATCAATAAGTTATATTGGTAAGTAAAAACTTGGGTCATTTGATGATTTTTAGGTTTAACTTACTGTTATCACTTTATTTTTTGATCTAAAATTATA # Right flank : AAATTGTTAAACCTCTCTGATGATTTTAAAAATTTATAGTTGTATAAATTGTTTATTTTATAGCAATAAAAAAAGCCCACTTGAATGAAGTGGGCTTTTAGAATTTGGCTCTCCAACCTGGGCTCGAACCAGGGACCTGCGGATTAACAGTCCGTCGCTCTACCGACTGAGCTATTGGAGAATCTGCATGCGATTATAAGGATATATCACGAGTGGTCAAGCCTTTGATGTCATCTTTTCTTCATTTTTGACTTGTATGCTTTTTATTTAAACAAAAAAGATCAAAATTAAAAAAATGGATTTGAGTGGTTGCAAAGCGAGAGCTGACTTGTTAGATTAAAAACATAAAGAGCGTTTAAGTTTGACTTAAACCGTGTGGATTTAACCAACTTGCCAGCACTAAAATGGCTAAATAGGAGACAGCGCGATGACGACGCTAACTATTTCTCAAATTTTTGAAAAATTTTCTTTTTATCAAGAAAACTACCTTTCTATCCTGC # Questionable array : NO Score: 5.99 # Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTACCGCATAGGTAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:57.14%AT] # Reference repeat match prediction: F [matched GTTCACTACCGCATAGGTAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-6.00,-5.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [81.7-83.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 88315-90802 **** Predicted by CRISPRDetect 2.4 *** >NZ_BKQT01000018.1 Acinetobacter bereziniae strain TUM15358 sequence018, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 88315 28 100.0 32 ............................ TATCATAGATGAAGAAAAGTTTTTAAGTGTTT 88375 28 100.0 32 ............................ TATTTGCAAACTCATAAGTTGAATCTAGCGCC 88435 28 100.0 32 ............................ CTCAAGCTTTCCACTTCTGCAATGGCTTGTGC 88495 28 100.0 32 ............................ TTTCATTTTGTAAGCTAAGTTAATACGCTTAC 88555 28 100.0 32 ............................ TCGTACACATTGTCAATGTCGTACGCTAATAC 88615 28 100.0 32 ............................ TTAAGTCCAGTAAACACAATAGTCACTTGACC 88675 28 100.0 32 ............................ TAGATATGTCGGGTCAACACTCGATGAAGCAT 88735 28 100.0 32 ............................ AAAGCAGTAGGGCAGTTTTCTTCTCAGTTGGC 88795 28 100.0 32 ............................ AGACAGTGCGATTCTTGTGGACATATTTTCCC 88855 28 100.0 32 ............................ TGACTCAGATGCGTCGATTCGAGCAGATGGCA 88915 28 100.0 32 ............................ AAGATTGTCGTCTTCAATATCATTACGATCAA 88975 28 100.0 32 ............................ AAAGGCAAAAAAGAATCTCAAAAAGATGAAGC 89035 28 100.0 32 ............................ ACCAACCGTATTAGATTCTGCTGCCACAACTT 89095 28 100.0 32 ............................ TTGAACTGTTTCCAAAGCATTCAAATATTTGT 89155 28 100.0 32 ............................ TATTTGAAAATGGAAACCACTTTATTCCCGAC 89215 28 100.0 32 ............................ TCATGACAATTTGAGCGCCAAGAAGATAAGCA 89275 28 100.0 32 ............................ AATCGGTACAACTTATCGAGGTGGTGTTTTTG 89335 28 100.0 32 ............................ GAGTGTTCGCGATTTGTTAGATGCGGAAGTTC 89395 28 100.0 32 ............................ AAAGATCCCCTAGCTGTGCACGTAAGACATTT 89455 28 100.0 32 ............................ AATCAAATAAACAGTATTTTCAGGTAAGCGGA 89515 28 100.0 32 ............................ ACTAGTTTTAAATAAAATTGCTGCTGGTTTCC 89575 28 100.0 32 ............................ TTCTGTTTTGGGGAAAATCATGAGTTCAGAAA 89635 28 100.0 32 ............................ ATCTTGAAATGGTCATGCGTGAATGGGGTTAT 89695 28 100.0 32 ............................ CATTGATTACAATCACATTTAGTGCAAAATCC 89755 28 100.0 32 ............................ TTAATTTTCAGTTTTTTTTCAATCATTATGTC 89815 28 100.0 32 ............................ TAAAAAGAAATCTCATTTACGTGAAGCTAATC 89875 28 100.0 32 ............................ AAAAGGTTCGTGGCGTAAATTTGGCGTAATGC 89935 28 100.0 32 ............................ ATATCAGTAAAGTCTGAGGCTAATGACTCATA 89995 28 100.0 32 ............................ ACTCCATTTTCATTGACTGTTCCCATCCAAAA 90055 28 100.0 32 ............................ AATCAAACAGCACAGCAAATTCAGTCTAACAC 90115 28 100.0 32 ............................ ATTCGGAACAATTGATAAAACTGTTTCATATC 90175 28 100.0 32 ............................ TAAGACGTTTATTTAAGCTTAAAATGGCAACG 90235 28 100.0 32 ............................ TATAGGCGGAGTTTGAGTTAACCAATCTTTTA 90295 28 100.0 32 ............................ ATCTGCAACGGTCTATGTTTGGGCAAACTGTC 90355 28 100.0 32 ............................ AATCAGGGAAATTTTGATAAATCGGGTCATAA 90415 28 100.0 32 ............................ AGTATCAAAAACTTTTAGTTTTAAGGGGCATA 90475 28 100.0 32 ............................ AACTTCTTACCAAACCTCTTGTCAACTTGCTC 90535 28 100.0 32 ............................ AATACGCCATATAACTTGATCGTTTTAAGCAT 90595 28 100.0 32 ............................ GCGACCGAACATGCCAAGGATTTTACGACCCA 90655 28 100.0 32 ............................ TTCGCCTTTACCACCGCCATTATTGGGGTCAT 90715 28 100.0 32 ............................ TAAAAAAGAATTAGAAAAAAAATCCTTTAATG 90775 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================ ================== 42 28 100.0 32 GTTCGTCATCGCATAGATGATTTAGAAA # Left flank : TCGTTGGGCGAAAACATTATATAAACAACTTGCTAAAGGCTTTGGAATCGAATTTATCCGCGATGAAGGAAAAAATTCTCACGATACTATTACAGATATAGCCAACAATTACCTAGATCATGGAAATTATATTGCCTATGGCTATGCAGCAGTTGCTTTAAATGGAATGGGGATTAGCTTTGCTCTACCTATATTACATGGCAAAACACGCCGAGGAGGCTTAGTTTTTGATCTCGCGGATCTAGTCAAAGATGCTATCGTGATGCCTATAGCCTTTATATGCGCAAGCAAGGGTTTAAATCAAAAAGAATTTCGAATGCAACTCATCGAGACTTGCCAAGATCAAGATATTTTAGATTATATGTTTAGCTTCATTACTGAAACATGTAGTAAAATTAAATAAAATCAATATCTTAAAAACAACTCTTCTATACGAAGTATTTTTACTCATTAAAAACTTATATAATTGATTTTAAGAGTTTTGTTTTAACTTAACTCTA # Right flank : TTAC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCGTCATCGCATAGATGATTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:64.29%AT] # Reference repeat match prediction: F [matched GTTCGTCATCGCATAGATGATTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-4.70,-3.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [83.3-5.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.14,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 21-708 **** Predicted by CRISPRDetect 2.4 *** >NZ_BKQT01000047.1 Acinetobacter bereziniae strain TUM15358 sequence047, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 21 28 100.0 32 ............................ TTACCGTTTGGATTCTTAGCAAGGTTTTGTAA 81 28 100.0 32 ............................ AATCTCAAGCCCTACAGATACAACGCAAGTTC 141 28 100.0 32 ............................ AATCCGTTCCATAAACGTTGTGACCCTGCAAA 201 28 100.0 32 ............................ TCAAGGTTCATATTTTGTTATTGATGAAGCAC 261 28 100.0 32 ............................ ACCAGCGCACGGAAACATCACGGGCACATCTT 321 28 100.0 32 ............................ TTTATAGCAATATGTTAATTAAGTCGCTTGGA 381 28 100.0 32 ............................ TGGAACATCACCACACCATAAATCAGCCTTTT 441 28 100.0 32 ............................ GTTAGGACGCTTCCAAGAGCCGAACATTTCGA 501 28 100.0 32 ............................ AAACAGAATTCAGTCAAAGCAACAAGAACAAC 561 28 100.0 32 ............................ CTCCATTTTCGCTTTTCATTAAACTGATACTC 621 28 96.4 32 ......T..................... ATATCTGCTATGTAGCCTTTACCTCTTGTATG 681 28 82.1 0 ......................ATCCT. | ========== ====== ====== ====== ============================ ================================ ================== 12 28 98.2 32 GTTCGTCATCGCATAGATGATTTAGAAA # Left flank : AGAAAAAAAATCCTTTAATGG # Right flank : ATCTAGAAACAGTCAAAACATTGTAATGAAAATTAACTCATCACATCATCCAATACTTTTACCATTAAAATTCTCTTGTATTTATTTTTAAGAGTCAATTTAGACTCCACTCAAATATCAAACAAATCATAAAAAAATCCCCGCACAATGGCGGGGATTTTTTATGATCTGAGATCAGAATGACTTACATCATTCCGCCCATACCACCCATTCCGCCCATATCAGGCATAGCAGGTTTATCTTCAGGAATATCTGTGATCATGCATTCAGTTGTTAACATTAAACCAGCAACAGAAGCAGCATGTTCAAGTGCAGATCGTGTTACTTTTGCTGGATCAAGGATACCCATTTCTAACATGTCGCCATATTGTGAAGTTGCAGCGTTGTAACCAAAGTTACCTTCGCCATTTTTCACAGCATTGATCACTACAGAAGGCTCATCGCCTGCATTAGAAACAATTTGACGAAGTGGTGCTTCAATCGCACGACGAAGGATATTT # Questionable array : NO Score: 6.17 # Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCGTCATCGCATAGATGATTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:64.29%AT] # Reference repeat match prediction: F [matched GTTCGTCATCGCATAGATGATTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-4.70,-3.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [26.7-73.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.27 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //