Array 1 117888-118624 **** Predicted by CRISPRDetect 2.4 *** >NZ_WKMT01000014.1 Parabacteroides distasonis strain BIOML-A15 scaffold14_size149357, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================================== ============================== ================== 117888 47 91.5 30 A......C.......................GA.............. TTCTCTGCGTTTTGGTTCAATGCGATTGCA 117965 47 100.0 30 ............................................... ACAACAAGACTGTACTCGAAGGAGGAGTTA 118042 47 100.0 30 ............................................... ATTCGCTTAAAGCATGAGCCGATACGTTGA 118119 47 100.0 30 ............................................... TGGGTTTGATATACATGACACCCAAAAGGA 118196 47 100.0 29 ............................................... ACACAAAAGCCGGATGCGTTGGCGCAATC 118272 47 100.0 30 ............................................... CGTCGTTTCTCAGATAAAAATAAAGCGATT 118349 47 100.0 29 ............................................... GCTTTCGCACAGACTTATTTTGCGGTACA 118425 47 100.0 29 ............................................... GTTGATTTGATTAAAAGAACAGGGAGACT 118501 47 100.0 30 ............................................... CGCTTTGGATATAATGAGCCTATAGAGTAC 118578 47 100.0 0 ............................................... | ========== ====== ====== ====== =============================================== ============================== ================== 10 47 99.2 30 GTTGTGATTTGCTTTCATTTTAGTAACTTTGAGCCATTGGAAACAGC # Left flank : TCTAAACGCTTGGAGAATCGATTATTTCGAGGCAAGGTACGACTTGCTTCCAAATTCGAAAATATTTTTTCACAATAATCTATTGAACAACGCATTACAAATTTTCACTGATTTATTCTAGCGAAAGATTTCGTCTTCTGTCAACCTCAGTCGGACAAACAAGCGACTTTTTATCTGAAAACAATAAGCTTTTCATCCGAAAACAATCGGATTTCCGGTCGGAAACAATAAGGATCGCAGTCGAAAACAGCATACAACGCCGTTATAAACACCTTACTATTGGATCATAATCCCTCTACAAAGCCTATTCATACACTAAAAAATGGCGAAATACGCTGTTTCCGCCTTCCTTTTCTCTCTATTTTCGCATTTCCATAAAAAGCCTTTATCAGCTAAAAGTCTCCATTTTGAGCAAAATGACAGAAAAAGAGATATTTTGATGACATAAAAGAGAATGGCTTACTTTTTGGTGTAGCTGCCCCAATATTTTGCAATATTTT # Right flank : CATATTATCTATTAAAAACTATTAATCAATGGATTACAAAGCACATCAGAATAAAAAAAACAGATATTGTTTCCATTAAAAATCCCGCTTGACAGCGGGATTTTTCTTTTAGAACAACTCCAATTGCTGTCCAGGAGTATTCACTTCCACCGTTTTCTTTCCATAAAAAAGTTCAATATTCCCAAACTGCTTATCCGTAATACACATGATTCCGACATTCCCATGCTCCGGAAGAAAAGATTTAACTCTTTTTACATGTACGGCCGCATTCTCGCTACTAGCACAATGGCGGACATAAATAGAAAACTGAAACATCGTAAATCCATCTCTTTGTAGATTTTTCCTGAAATCCACATACGCCTTTTTCTCCTTCTTCGTCTCGGTAGGCAAATCAAACAACACAAGTACCCACATAACACGATATTCGCTAAACCGATCCATATTACATTTCCGGATAGGAGATTCTACGCAATTCGCCACTAAAGCACTTATACAGAGAA # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGATTTGCTTTCATTTTAGTAACTTTGAGCCATTGGAAACAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.83%AT] # Reference repeat match prediction: F [matched GTTGTGATTTGCTTTCAAATTAGTATCTTTGAACCATTGGAAACAGC with 92% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-2.10,-0.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [66.7-80.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0.68 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], // Array 1 93142-92168 **** Predicted by CRISPRDetect 2.4 *** >NZ_WKMT01000012.1 Parabacteroides distasonis strain BIOML-A15 scaffold12_size186143, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ====================================== ================== 93141 33 100.0 32 ................................. AGGTGGATGTTATCAATCCCAAGACGGGCAAA 93076 33 100.0 36 ................................. CTTCGCAAGGTGTTCCCGCATTGATACAGGAGCAAA 93007 33 97.0 38 ................................C TGCACGAAAGCGAGCATCGTCAACAAGGCGATTGACTC 92936 33 100.0 32 ................................. ATATTACTTGAAGATTATGATATTGAGGCGGC 92871 33 97.0 34 ................................A ACAGCACGCCGCAAGATACGACGGATTACATAAC 92804 33 100.0 37 ................................. ACAGAACTGTGGACGGTCTGTGCCTCGATATACGAAG 92734 33 100.0 34 ................................. ATTATGAGATTATTGGAGGAAGTTAATACCACCA 92667 33 100.0 35 ................................. ATTATGAGATTATTGGAGGAAGTTAATACCACCAA 92599 33 97.0 34 ................................A GGATACTGAAAACGGAGAATAACAATCATGGCTA 92532 33 97.0 34 ................................C ACGTGGAACAAAGTAGCGGAAGGTCTTAGGCTTT 92465 33 97.0 32 ................................A CAATACCCAAAGCGTTTATGAGTATTACCTAA 92400 33 97.0 34 ................................T TACCATTGGTCGAATACCCGATCTTGACAAGACC 92333 33 97.0 33 ................................C AAGTCATCCACGTTTTTTTGAAACTCCGGATGA 92267 33 97.0 34 ................................T TTGGTAAGCTCAACGTAAAACTCAATTTGAGACT 92200 33 97.0 0 ................................A | ========== ====== ====== ====== ================================= ====================================== ================== 15 33 98.2 34 GTCGCACCCCGTGTGGGTGCGTGGATTGAAACG # Left flank : TGATAATTATCCGGTATTTCTAATAAAATGATTTACGATTATGCATATTCTTGTGACTTATGATGTGGATACTACGAGCAAAGAAGGAGCTCGCCGCCTACGACATGTGGCTAAGGCTTGCATAGATTATGGCCAAAGGGTACAGAATTCTGTCTTTGAGTGTGAGGTGACAGAAGCACAATATTGTCTCTTGATTGAACGAATCAAGCGTATTATTGATATGTCTCTTGATAGCGTTAGATTTTATATTCTCAATAAAAACGAGAATAAAAGGGTAAAAGTGATAGGTGTTGAAACTGCTTACAAAGTTAATAATGCTCTTATCATATAATTTATGCGAATGTGGAGTATTACGAAAAAAGTAGTATTTTCGCACCCCTTAATAATTAGCAGATTAACCCGTCTTTAAGGCGATTGCAGCCATTAAGCTGAAATAAAAATGAGAATTCGCATATTAATAGGTCTAATTTATTGACTTATAATATGTAACTTTGCACACT # Right flank : TTTGTAAAGCGCAAGCTTTTTCATAAAAGATATACTTACGTGATGAAGTATATCTTCTATGGGACTTGAAGTGTTCTTCTGCGACGAAGGGATTAGTACTTCGTAAAAATAACTTTTTAAAGTCACTGACTCTGACATATAATTTCGCTTAGTTATTTCTGCAAAAATCATTCATATGTAAACAAGTTTCGTATATTCGCGACCTTATAATAGTTTAAATATGGCAGAGGAACTACGGATTAAAAACGGTGATAAACAGGAGATGTATGAGACATTGCTCCCGCAAATCGCCTCATTGGTAGGTAACGAGACCGACCTAATCGCTAACATGGCGAACATCGCCGCAGCACTCAAGCAGACTTTCGGTTTCTTTTGGGTAGGTTTCTACCGGGTCATAGACAATCAGTTGGTATTAGCGCCTTTTCAAGGCCCTATCGCCTGTACACGTATAAAATACGGAAAAGGGGTATGCGGCACGGCCTGGAAGGAGGCTCGTACGA # Questionable array : NO Score: 5.80 # Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.63, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACCCCGTGTGGGTGCGTGGATTGAAACG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [7,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCACCCTGCGTGGGTGCGTGGATTGAAACA with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-4.60,-4.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [71.7-73.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.74,9 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //