Array 1 526243-527514 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_JAALMF010000001.1 Clostridium perfringens strain CP-34 1, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence              	Spacer_Sequence                      	Insertion/Deletion
==========	======	======	======	=============================	=====================================	==================
    526243	    29	 100.0	    37	.............................	AGTTTGGAAGAGAAGATGGCACAGTAGGAACAGGAGC	
    526309	    29	 100.0	    36	.............................	CAAATAAAACGAAAATCTACAAATCTAAAAACGTAA 	
    526374	    29	 100.0	    35	.............................	AAAATTCCATCGAACGGTTTACTATCAGTACCATC  	
    526438	    29	 100.0	    37	.............................	TTGGGAACTAACTATATAGAAGATTTCACATATCTTT	
    526504	    29	 100.0	    36	.............................	TATTTTTTGGGTGGTATGGTGGTATCTAAGAAAAAT 	
    526569	    29	 100.0	    37	.............................	CGACAAAGAATAACTTTATAACGAGCATAACTAAGTG	
    526635	    29	 100.0	    36	.............................	GTGTTTTCGCATGGGATGAGGTTCAAAATGAATTTA 	
    526700	    29	 100.0	    37	.............................	ACTACATACATATATAGCAATGGGATTATCCACTATG	
    526766	    29	 100.0	    37	.............................	AAAGTTTCTGTAACAGTTAATAATCCATTTTGAATCC	
    526832	    29	 100.0	    36	.............................	ATGATATTATCTCATCATTTTGGTTATTATGGATTA 	
    526897	    29	 100.0	    36	.............................	ATATTTTGTTGAATCTTTTGGATCAGGTTGAAGATA 	
    526962	    29	 100.0	    37	.............................	CTTATAGCTAATGCTAATAAGTTGAAGGCTCCGACTA	
    527028	    29	 100.0	    36	.............................	CACAATGGGATTGATATTGCAACACCAACTGGTACA 	
    527093	    29	 100.0	    36	.............................	ATTGTTTTTATATAGTTATAATAATAACGTGAATTA 	
    527158	    29	 100.0	    37	.............................	ATGGAATATATAGAAAGACTTTCAAATGGAGAATTGC	
    527224	    29	 100.0	    37	.............................	AGATTTGACTTTTGATGATGAATTAAATTATATGCAA	
    527290	    29	  96.6	    36	.......A.....................	CTAGAAAAACCACCGTTACCACTTACCAACAATTTA 	
    527355	    29	  96.6	    36	.......A.....................	TGATATTCTAAAGCTTGATTACTTTTAAGTCCATTT 	
    527420	    29	  96.6	    37	.......A.....................	TCATCTGATAAAACTCTTAAAATAATATATTGATTAC	
    527486	    29	  79.3	     0	.......A....T.....T.GG......A	|                                    	
==========	======	======	======	=============================	=====================================	==================
        20	    29	  98.5	    36	GTTTTATCTTAACTATGAGGAATGTAAAT	                                     	       

# Left flank :   AACTTAGAAATATAATATCTTTTGATATAATACCTCAATGTATTTATGAGAAAAATGAATCAGAAATTGAAAGCTTACTTGAAATTATAAATGATGAAAAAACAGATAAAATAAATAGAATAAAATCCATAGATAAAATAAAAAGTTTTACAGTATCAGTTGGGCAATATGATATTGAACTTTTAAAAAATAAACTTATTATGGAGTTAGAAGTAGGAAAGTATGAAAGAATTCCAGTATATAAATGCAATTATTCAGAGTTGGGATTTACTAGAAACACCAAAGAAGATGTATATGATAATTTCATATAAAACTAATTTTGCAGTAGATCTATTTTCTTATAATACTAGCTGTAACCAAGTAATATCAATGGTTAGAAGAAGATTTTTATTGATACACTAAAACATTACTGATGGTCTACTGCAAAATTTTAATATTTATGATAAAATTAACAAGAGAGAATGAGGCTATTACTAGCTTTTAGCATTTTAAAATTTGGG
# Right flank :  AAAATAAAAAAAGCATCTTAAAAAGATACCTTTAAACTTAGAATTTTTTGTTTCAATAGCAAGTGAACCTAATGCAGATATATTTCCAACAATGTTTTGGCTTGCTTTATATACAACATTGCCATTTCAAAGTGTAATAAATCTTTTAGTAGGCTATAACATAGAGAGTTTGTCATATTTAATACTTCCAATATATATGGTAACATTAAGCTTATTAAGTTATAAGGTACTTAAATTTAAACCTCAAAAAAATAAACAAGATGAGTAATTTAAGTTCTATAATAAGAATTAAAAAGTAAAATGGACATGATATCTGTCCATTTTTACTTAATTATTAATATATACTTATTAAATTAAATTTAGAACTTTAAATCTAATAATCTATGCATTTAGCAGTTTACATCTAATAGCTCCCTTGAAATTTCCTCAAATCTTTCATCAGATATACCAAGTTTTTTCTTAAATATATCATCATCAATTCTAGCAACAATAACCTCATT

# Questionable array : NO	 Score: 6.19
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTTTATCTTAACTATGAGGAATGTAAAT
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:75.86%AT]
# 	Reference repeat match prediction:         NA 
# 	Secondary Structural analysis prediction:  NA [-0.60,0.00] Score: 0/0.37
# 	Array degeneracy analysis prediction:      F [0-6] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [71.7-80.0]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [0.41,0   Confidence: MEDIUM] 

# Array family : NA
//