Array 1 158534-158085 **** Predicted by CRISPRDetect 2.4 *** >NZ_PUQF01000006.1 Enterobacter sp. GER_MD16_1505_Eko_090 ENKO-BIM090-S16-VE-DEU-2015-033-PK_S26_83, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 158533 28 96.4 32 ...................T........ AACCCTTGCGCACCTTGGTGAACAAGCGGTGT 158473 28 100.0 32 ............................ TTCGCAGAATGCGAAGAATCGGAACCAGAAAC 158413 28 100.0 33 ............................ GTATATGAATCCCCCATTTGCCAGGCAAGCGGT 158352 28 100.0 32 ............................ TGAGAAGTACGAAGCAGAGTATGGAAAGACAC 158292 28 100.0 32 ............................ ATGCGCGGACAGAATATGTCAGCAGAAACCGC 158232 28 100.0 32 ............................ GCTGGAATCAAAGTGATGGAGTGAGTATAAGG 158172 28 82.1 31 A...A......C...C......C..... ATAGAAAATAAGGCCTAACAGTCCTCGGACC C [158147] 158112 28 71.4 0 ....A...T..A....A....CCT...G | ========== ====== ====== ====== ============================ ================================= ================== 8 28 93.7 32 GTGCTCTGCCGTACAGGCAGCTTAGAAA # Left flank : AACGGGCCACGCGTTCGCTCTCGTCGGGCGTTAACGTCCGTCCCGCGCTTTTGCGGCGGGCCACGTTACGTTCGTTGATACCCGTGACACGCAAAATGTCCGCTTTCGACATGGACGTCCACTCGTGGATGTTGTCGAGCACGCTGACGGGTAATCCCTGATTGAGAAATTCAATCAACCGCATACCTCGGTTGGCGGGTAAACCGGCGTAACGCCAAAGTGCGTTATCAGCAGGTTTCTGTGCGGGGATCCATGTTCTCATGTAACCTCCTGAGTGATGTCATTTGTCATGGTTAAGTATAGCCATTTGTCAGGGTGGGTGGAATGGGTGTTTTTGTGTGGGGGATTAATGCGAAGAAAGGTGTTTTGACCCTAATTTTTAGCGTTTGTGTAATAGATTGATTTTAAATGATTATTTCTGGTGGATGAAAAAGAGGGTGAGAGAAGGATTTTTAGCTTTTTTTGTATGCAAATCATAAGGGTGTGGAGATATTATTTCA # Right flank : CTGGAACGAACGGCTAATTAATTGTTCAAATAATCAACTGCGACACAAAAAAATAAGGCCGGGAATATCCCGGCCTTATTTAATATTCATCTGCCATTACAGGCGAAAACAATTAGCGACTACGGAAGACAATGCGGCCTTTGCTCAGGTCGTACGGGGTCAGTTCAACAGTCACTTTGTCGCCCGTCAAAATGCGGATGTAGTTTTTGCGCATTTTACCGGAGATGTGCGCAGTTACCACGTGACCGTTTTCCAGCTCTACGCGAAACATGGTATTAGGCAACGTATCAAGTACGGTACCCTGCATTTCAATATTGTCTTCTTTGGCCATCTAATCCTCTGGGGTATCACTACCAAGTTTTGAACCGGCAAGATAATGCCGAAATTCATCAATTAAGTAAAGAATTGCGCGTTTGAAACGCAGCAAAACAGTTTCGGCGCATTGCCCAAGCGTCACGGTACAACCGAACGGAAAGCGCATTCGTAAAGGGGATACAACA # Questionable array : NO Score: 5.95 # Score Detail : 1:0, 2:3, 3:0, 4:0.69, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,7] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGCTCTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [14-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [63.3-70.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.65 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 168660-168030 **** Predicted by CRISPRDetect 2.4 *** >NZ_PUQF01000006.1 Enterobacter sp. GER_MD16_1505_Eko_090 ENKO-BIM090-S16-VE-DEU-2015-033-PK_S26_83, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 168659 28 100.0 32 ............................ AATCGCCATTTCGATCCCGGTGCTGGCACCGC 168599 28 100.0 32 ............................ GCTTGCTAACCCCGGCCAGGCGGGGCTGATTC 168539 28 100.0 32 ............................ AGAAATTCATGGGTGAACAAACTAACCCAGGC 168479 28 100.0 32 ............................ AGAATGTGTACGCCAGGCAGTTAGGGGGCTGG 168419 28 100.0 32 ............................ AGGCTGCTCAGGTGCCACAGCAACAGACACCT 168359 28 100.0 33 ............................ GCTTACTGCAGAAGTTAGAAAATGATCCCCGCC 168298 28 100.0 32 ............................ TGCGACAAGTGCCAGATATCAAGCGACTGTGG 168238 28 100.0 32 ............................ CGTGGCCGTGCGGTCACGGCGAAGCATCTGAA 168178 28 100.0 33 ............................ CGTACTCAGGTGAGATTAGTGGCTTCACATCAT 168117 28 100.0 32 ............................ GCGCAGATTGCCGCCCGTCTCGGACGAACAGT 168057 28 75.0 0 ...........C.....T...AC.ACT. | ========== ====== ====== ====== ============================ ================================= ================== 11 28 97.7 32 GTTCACTGCCGTACAGGCAGCTTAGAAA # Left flank : CTCCCGCAAACGCAGCCCGTTTGCCGCTGTCTCGGAGCCTGGCTGGAAGAGGTGAAATCCGGCCTCACAGAATCAATGCGTGATTTTCAAGTGTTGGAATTTGAGGACGAAGCGGAAAAACCGCGACAAAAAGAGTGGTTGCTGGAAGATACAGAAACGAAATGCGACTACTGCCGGGCGTTAAACCATGTGCTGCTGGTGTCGCATTTTGACCGAGATATGTTGCCGCACCTGACGGGGTTGCTGCATGACATTACGCATTCAATGGCCGCGGATGTCGTTGCACCTCAAAGTGCAGAAACGGTAATTCACATTATTTCCTGAGTGCTATCTGAGGCGTCGGGGGTGTTCCTCTAACGCCATTGGTTTAAACCCTTTTTTCTGATGCTTACGTAAAATATTGATTTATATGGTTATAATTTACGTCCCAGAAAAAGGGTTTTATGCGAAAAAGTTGATTATTTTGTTTGCTAACAATAGGATGGCGTTGTTTCCTTTCA # Right flank : AAAACAACTCTCTATAACATTCAGCTTACCTATTTAAAATTTAATACTATCAAACCCACATTCTTTATTTTTCGCAATAAATAAAAAATTCATTCACATACCAATTATATTCTAATGAATATATTGTTCGTAAAAATAATGCATTAAATGGAAAAGTGATTTTTCACTTTATTATCGCGGTAATTACTCTTCATTTGATACCCGTCACATTTGTTTTCATCTTATCTTCGATAACATACCGCGCATTCAACACCTTGAAATAAAAGCCCTTGCTATGTCCGTAAACAGCATCACTCCAACAGACTTAAAAACTATCCTGCATTCAAAGCGCGCCAATATTTATTACCTGGAAAAATGTCGCATCCAGGTGAATGGTGGGCGCGTTGAATATGTCACCCAGGAAGGCAAGGAGTCGTTTTACTGGAATATTCCCATCGCGAATACCACGGCAGTGATGCTGGGAATGGGAACATCCGTTACACAAATGGCAATGCGGGAGT # Questionable array : NO Score: 6.15 # Score Detail : 1:0, 2:3, 3:0, 4:0.89, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [7-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [73.3-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.65 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 3 185119-183526 **** Predicted by CRISPRDetect 2.4 *** >NZ_PUQF01000006.1 Enterobacter sp. GER_MD16_1505_Eko_090 ENKO-BIM090-S16-VE-DEU-2015-033-PK_S26_83, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 185118 28 100.0 32 ............................ ACGGAATATCCAAATTTCCAGCAGGACTGTAA 185058 28 100.0 33 ............................ TGGAGTACCTGAAGAACCAGAACGACGCATCAA 184997 28 100.0 32 ............................ TCGCCGCCTTTGGCGTTTCAGGAGCATATAAA 184937 28 100.0 32 ............................ CCGGCCCTTCTCGCCGTCCAGTGTCGCCGACA 184877 28 100.0 32 ............................ CAGCGCGGCGAGTTTTATGATTGTTCTTCGTT 184817 28 100.0 32 ............................ ATATTCACCACAGCCGAAATAGCGAATTTTAT 184757 28 100.0 32 ............................ AAATAAGGAGAGCAGTTTTGGTAGTGCTCAGT 184697 28 100.0 32 ............................ AGATGCCTCCGGCGGCGCTACCGCGGGTTGCT 184637 28 100.0 32 ............................ GCCCACGTCGCGCAACCCGCGGTGGCTTTCGT 184577 28 100.0 32 ............................ ATTCTGGTACCCATAAACGAAACCGCCCACGT 184517 28 100.0 32 ............................ GCCAATAGGGCGAAGAGCAGGGAATGACTCAC 184457 28 100.0 32 ............................ GATACCTGGAACAACAACCGGAGGGATTTGAA 184397 28 100.0 32 ............................ ATGATGACCAGCACGGTCTACTGTGTAATAGA 184337 28 100.0 32 ............................ ATAACAGCATGGAACTGAATATAGTCCTTTTT 184277 28 100.0 33 ............................ TGAACGAATTCACACCGCCGCCGATCACAGCGA 184216 28 100.0 33 ............................ GCGCGCAGGCGCGCCGGGCTACCTGCGGCCAGA 184155 28 100.0 32 ............................ CTAAACATTGATGGCAATTCACGAATAAGCCT 184095 28 96.4 33 .......A.................... TCCCATATGTCCATAAATCCACGCAGCGACCTC 184034 28 100.0 32 ............................ GTTATCAGGCTGCCTGTGCAGTATGGTCATCA 183974 28 100.0 32 ............................ AGGAGGAGCACAAGGGGCGGCGACTGAAAGTT 183914 28 100.0 32 ............................ ATGGAGATTCTCAACGACCAGCTAAACCAGGA 183854 28 96.4 32 ..........A................. AGGAACAGGCGTTTATACATCGGCTTGATAAA 183794 28 100.0 32 ............................ TCGTAAACTAATGACCACACTGGAGGGTTTAT 183734 28 100.0 32 ............................ GTGCCTCTGGCTGATGCGCTGGCGCGCATCCT 183674 28 100.0 33 ............................ ATTCCGACAAATCAGTTAACCCTGGTGACGAGC 183613 28 100.0 32 ............................ TCTGTAGCTTGCCGCCAAAAGAAGGCCGACTA 183553 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 27 28 99.7 32 GTTCACTGCCGTACAGGCAGCTTAGAAA # Left flank : ATGGGTTGCATAAGCTGTTTGGCGGGGTGGGCTTTATCAGCGGTATGCTGGTGGAGAAAGGGCTGCCGGGGTTTATTGCCTACGGCGTGTTGATTGGCGAGGTGGTGGCGCCGCTCCTGATTATTGTCGGGCTCTTTACGCGCCCGGCCGCGCTGGTGCTGGCGTTTACGATGATCGTGGCGTGGCTGATGGTGGGATTGGATGAGACATTCGCGCTCGACAAGGTCGGCGCATGGGCGATTGAAAGCCTGGTGTACTTCTTTATCGGCTCGCTGGCAGTGGCGTTTTTAGGGGCAGGGCGGTTTGCGCTGGGGAAAGCACCTGCGTGGCGGTAGGGGTTGGAATCTGTTCCGAGGGAAGGGGTCTACGGACCCTTTTTTATTGGTGAGTTTTAAGTTGTTGATTTCACAACGGTGAATTGTTGGTGGGGAAAAAAGGGTTTACGGAGAATTTTAGGGGGATTTCTTTATATCACAAGAAGATAGGTGTAGATTGTTCCA # Right flank : GCACTTCAGCCGGGTAAGCGTCGGTGGTTAGGGTCGAATGCCGAACAGGCAGTAGGCACAACGTAGGCCGGGTAAACGCAGTGCCACCCGGCAAAAAAGCCCGGTGGCGCTGACGCTTACCGGGCCTACGAACGAGCGTTTATTGTTTATGCGAGGACCAGATCGCCCTGCGGATGGCACGAGCACGCCAGCACGTAACCCTCGGCAATTTCCGCGTCGGACAGCGTCATGGTGCTGGTGACGGTGTACTCCCCGGAAACCACCTTTGTTTTACAGCAGCCGCACACCCCGGCACGGCAGGCCGCCGCCACCGGTACGTTGTTGCTTTCCAGCGCCTCCAGCAGCGTCGTGCCCACGCGGCCAAAGAAGGTCTGCGCAGGCTGCAGTTTGGTGAACTGAATCCCGCTGGTTGCCGCTTCCGCCACCGGCGTGAAGAACTGCTCTTTGAAGAAACGGGTCACGCCTAGCGCTTTCACTTCTTCTTCCACGATAGCCATGTA # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [40.0-65.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //