Array 1 563718-562905 **** Predicted by CRISPRDetect 2.4 *** >NZ_QRLA01000001.1 Bacteroides eggerthii strain AM14-12 AM14-12.Scaf1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================================== ============================== ================== 563717 47 100.0 30 ............................................... CCGCCAGTGCTTTCGCTTCCGCAATATCTT 563640 47 100.0 30 ............................................... CCGCCAGTGCTTTCGCTTCCGCAATATCTG 563563 47 100.0 30 ............................................... CGGATTGTACATATTATTGAATGGCTTCCC 563486 47 100.0 30 ............................................... GGACGCAGCCGTAGGGCCTTGAAAATAAAA 563409 47 100.0 29 ............................................... AATCTGCGAAGTAGTTTCCGATAATGGCA 563333 47 100.0 29 ............................................... AATCTGCGAAGTAGTTTCCGATAATGGCA 563257 47 100.0 29 ............................................... AATCTGCGAAGTAGTTTCCGATAATGGCA 563181 47 100.0 30 ............................................... TATATCCAATAATACTTCCATGTTTCCCTT 563104 47 97.9 29 ...............C............................... CCTGTACACCATTTTCAATGCTGTTGACC 563028 47 95.7 30 ...............C........T...................... GTCCTCGTGCTGTGGATCGTAGTGCAACTG 562951 47 97.9 0 ....................................T.......... | ========== ====== ====== ====== =============================================== ============================== ================== 11 47 99.2 30 GTTGTTTCCAATGTTTCAAAGATACTAAAATGAGAGCAAATCACAAC # Left flank : AGCATCTCTGTATAAATGTTTCAGTGGTGAATTGCGCAAAATTTCTTATCCGGAGATGTAATGGACCGGTTTAGTGAATATCGTATTATGTGGGTGTTGGTGCTGTTTGATTTGCCTACCGAAACAAAGAAGGATAAAAAGGCGTATGCGGACTTTAAAAAAAATCTGCAAAGGGATGGATTTACCATGTTCCAATTCTCTATATATGTTCGTCATTGTGCAAGTAGTGAGAATGCAGAGGTACATATAAAAAGAGTTAAATCTTTCTTGCCGGAGCATGGAAATGTTGGAATAATGTGCATTACGGATAAACAATTTGGAAATATAGAACTTTTCTATGGCAAAAAGACAGTAGATGTAAATACCCCTGGGCAGCAATTAGAACTGTTCTGAAAAGAAAATCCCGCCATATAGCGGGATTTTCTTCTTGGAAACGACGTCTTTTTTTATTTCTAATATCTTATGTAACTATGTGTATATTAGATTGTTGTTGATAATCT # Right flank : TCTTGGAGGAAAATATCCTTCATATCATAGCTATTTTCAATGTTTCAAAGATTTTTCGATGAGTGGTAACGTAATCCAGTGTATGCAATATTGAATGACACTGGATTGTTATGTTTTCGTAATGATTCATTTGTTTTTCGATGAATTCACTGTCACTACTGCTATTTGTTCCATAGAGGCTTACGGATACCTCTTCATACATATAATCGAGATATTGTTGGGCTTGTGCCATATCTGGATATGTGTTCTTAGTTAGAAATTCTGTATTGGAGGCTGACACTTACTGTGTACAAAGGTACACAGTAAGTATATTGATAAGAGTTTTATTCGTTTTTTCATGTTTATTTTATCTGTGTTTACCAATTATCTGTTCTAAATGGAGCTACAGGAATACCATAGGTACTGAATACACTTGCTTTTGCATAATTTTTGTAAGCGTATCGAACTGCTATCGGATGCTGCACTTTATCGCATGATACGGCAAGGTGGGTTGTTTTGGT # Questionable array : NO Score: 3.22 # Score Detail : 1:0, 2:0, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTTTCCAATGTTTCAAAGATACTAAAATGAGAGCAAATCACAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:68.09%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.40,-0.80] Score: 0/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [71.7-80.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA //