Array 1 389484-395767 **** Predicted by CRISPRDetect 2.4 *** >NZ_WLVF01000001.1 Capnocytophaga canimorsus strain CCUG 17663 NODE_1_length_427742_cov_5.308184, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================================== =============================== ================== 389484 47 100.0 30 ............................................... TGCCTGCAAGCCCGGCAAGAAGCTGACGGC 389561 47 100.0 30 ............................................... TAATTCGTTCGCCAGTACTCAGCACTCGTA 389638 47 100.0 30 ............................................... GCTCGGGGTTGATATAAGCATCGACTCCTC 389715 47 100.0 30 ............................................... TGTTTCTGTGATCAGCACGCGATACCATTT 389792 47 100.0 29 ............................................... TATGGTTTACTGGGGAGAAGGAGTTACAG 389868 47 100.0 30 ............................................... TGGAAACCAAAAGAAAACAGATTTGATAAA 389945 47 100.0 30 ............................................... AAGGGGCCGGATACATCCAACGGCGTGCGT 390022 47 100.0 30 ............................................... ATGTAGGCGAAAGTCCGTTAACCAATGAAA 390099 47 100.0 30 ............................................... CAATGCGTGATTTGTCCGTATTGGAAAGCA 390176 47 100.0 30 ............................................... AACGTAAGCTTTAACATGGACTATGCATAC 390253 47 100.0 30 ............................................... ATGAACCAACAATGGCATATAATTATAAAG 390330 47 100.0 30 ............................................... ACTTAAATTATCAGATACAGAGGAAGAATT 390407 47 100.0 30 ............................................... ATCGCTTTCGCTGCTGAAAACCGATCTGGT 390484 47 100.0 30 ............................................... TAAATAACAATTTTATCATCAACAATTGTT 390561 47 100.0 30 ............................................... GCTTACATAGATATGATCTATATTATTTCC 390638 47 100.0 30 ............................................... GCTAATGAACGTTATCACGAACTTATAAAA 390715 47 100.0 30 ............................................... TTTAACGGCAAGGATGAAATTATTATGAAG 390792 47 100.0 30 ............................................... GCGCGGCCGAGCACCCGCACGAAGTCTTCA 390869 47 100.0 30 ............................................... ACATTTACTAAAAGTTTCATATTTTATTTG 390946 47 100.0 30 ............................................... TAATTTTGTTTATTCTTTTAATTTTCCAAG 391023 47 97.9 30 ........C...................................... TATTTTTAAAAAATAACAAAAAATGGGAAA 391100 47 100.0 30 ............................................... AGAAAGAAAGTCCTCATCTGATGAGGGAGA 391177 47 100.0 30 ............................................... ATCTCGCCTTTTACTTGCCTAACAAAATGT 391254 47 100.0 30 ............................................... TTGGATGGTGCTAAAGAGTTTTTTTGGAAT 391331 47 100.0 30 ............................................... AGTTCTTTTATAGATAAATTATTTGAAGTT 391408 47 100.0 30 ............................................... TTGGGATTATTACATAATTTACGAAAGAAG 391485 47 100.0 30 ............................................... GGGCGAACAAAATATAATTATTTTTATCAA 391562 47 100.0 30 ............................................... CGTAGGTGAAGCCATTCAAAAGGACTTTTT 391639 47 100.0 30 ............................................... TTTTCGATTTACGCTATCTACAATGCCAAC 391716 47 100.0 30 ............................................... CCAACGTTTCCAATCTGCCTCACGATATGC 391793 47 100.0 30 ............................................... AATCATATCAGAGATTATCTTGATTGCTAC 391870 47 97.9 30 ..............................................G TACTCTAACTTTATATTCTTTTAAATATAA 391947 47 95.7 30 .........C....................................G TGCTTGTAATGTTACAATATCACGGCTGAT 392024 47 95.7 30 .........C....................................G GAAACAAAAGACGTCATCTGCCAATATTTG 392101 47 95.7 30 .........C....................................G TATAGTTCTCACTACCAGTTACCCCTTGTG 392178 47 95.7 30 .........C....................................G CAGCAAGCCTGTGGGAGCGCATTACGAATC 392255 47 95.7 30 .........C....................................G AGATATTGTAGCGATACTTGTATTCGGACG 392332 47 100.0 30 ............................................... TATTTATTAAATCTTCTTAATTTATACTTG 392409 47 100.0 30 ............................................... ATACTGGTAATAGAATTCCCTGTTACCTAC 392486 47 100.0 30 ............................................... TGGGATGATGAGGCGGGAATGATTTATGAT 392563 47 100.0 30 ............................................... AAAAGCTGTTAAACTATCTAAAGATACTAT 392640 47 100.0 30 ............................................... ATGAGCCAATACGCTTGTGCCGTGTCGTTT 392717 47 100.0 30 ............................................... GAATGGCTTACTCTTGCCGTGGAAAAACTT 392794 47 100.0 30 ............................................... GAGAACTACATCAGCAAGACAGATACTATC 392871 47 100.0 30 ............................................... TAAGTGCAATCCTTTGTATTATACTGGTAC 392948 47 100.0 30 ............................................... GGTGACATTGTTCTCGAATTTTCAACATCT 393025 47 100.0 30 ............................................... GGAACCAATACAAAATGGTTAATACTGACG 393102 47 100.0 30 ............................................... ATAGAGCCACAAAATACTAAAGTTCTATCA 393179 47 100.0 29 ............................................... GGGGCTCGAACCCCGATGCCTGCCAGTAC 393255 47 100.0 30 ............................................... TACCTGTATCACTTCTCTCATTTCTTCTTC 393332 47 100.0 30 ............................................... GAAATTCCTATTTTCGGGAATGGCGATATA 393409 47 100.0 30 ............................................... CATTTGCAGTGCTAACTATTTCTTTTGCTA 393486 47 100.0 30 ............................................... GTAAGGATGTAGGTTCTGAAGCGTGGAATA 393563 47 100.0 30 ............................................... CTATTTCCTGTTTATTGGAAGCTATAAATG 393640 47 97.9 30 .........C..................................... AATAGCAAAGTAACCTGCTGTGGGGATTTT 393717 47 100.0 30 ............................................... CTATTTCCTGTTTATTGGAAGCTATAAATG 393794 47 97.9 30 .........C..................................... AATAGCAAAGTAACCTGCTGTGGGGATTTT 393871 47 100.0 30 ............................................... CACGAGTGAGACAATGTAAGTCCATTTTTA 393948 47 97.9 30 .........C..................................... TACACTTGAAAAGGCAGCCAAAAAGCTATC 394025 47 100.0 30 ............................................... TGCAGGAGTTCCTGTCATAATCATTTTGTA 394102 47 100.0 30 ............................................... TGATTTTCAATATTATAGAAACAGGCACAA 394179 47 100.0 30 ............................................... CCCAAGAGAGATAGACGAGGAAGGAGGTGT 394256 47 100.0 30 ............................................... TCTGCGAGTTCTGGCCACTCATCTCGGTAG 394333 47 100.0 30 ............................................... TCCTTAATTATATAGTGCAAATATAGGTTA 394410 47 100.0 30 ............................................... TTACTTCTGATGAGTTTAAAAAAGATTTGA 394487 47 100.0 30 ............................................... GAACTTTCCGATGCAATGTGGAAACTGCGA 394564 47 100.0 30 ............................................... ACATATGTAAACAATATAAATATATTCATA 394641 47 100.0 30 ............................................... GACTATCATATGCAGCACGAACCTGTTTTG 394718 47 100.0 30 ............................................... TTCGGAACTAAAACATCAAAAGCATCTATT 394795 47 100.0 30 ............................................... TATTGTTGTTGTTTTAACCACTCAGCGTGT 394872 47 100.0 30 ............................................... GGCGTGTCAGTGCTGAAAGTGGGCAACCAC 394949 47 100.0 30 ............................................... AGGTGCTTTTTTTAGTGTTTTTTTTCAGTA 395026 47 100.0 30 ............................................... TTAAATCATACTTACTAATGTTTTCTCCTT 395103 47 97.9 30 ........C...................................... AAGTGATTTTGATAGGTTTTTAGATTTTGA 395180 47 97.9 30 ........C...................................... AGAGGCGGTTTATTCTAATAAAAATGTCAA 395257 47 97.9 31 ........C...................................... TGCAGTATATTGCGAACTCAAAAACAGAGAA 395335 47 97.9 30 ........C...................................... TGCATTGTGAACAAAAATGTTTTATATTTG 395412 47 97.9 30 ........C...................................... GAAGACGGCAGCGTCATTCAATCGCAATTT 395489 47 95.7 30 ........................A...T.................. TAGCGTTGTGTTTTCGCTATTTCTTTGGTT 395566 47 95.7 30 ........................A...T.................. TATCCATTATGTAATAATTATCAAAATCTA 395643 47 95.7 30 ........................A...T.................. AGCGTTTATCCTTTATCCGAAAAAATACTT 395720 47 80.9 0 .........C........................T..G..AGCACT. | T [395754] ========== ====== ====== ====== =============================================== =============================== ================== 82 47 99.1 30 GTTGTAACTAATCACAAAGTTACGGAAAATTGAAAGCAATTTACAAC # Left flank : CAAATGCTATACGGGCGAAAAAAGACAAATTTCTTATCCTAAAATGTTATGAATTCCGAACGATTTAACGCTTATAGAATTATGTGGGTAATGGTTTTATACGATTTGCCAACCGAGACCAAGGCAATGCAAAAAGCAGCCAATCTCTTTCGAAAACGCTTGGAAGATGATGGATTTTCTTTATTTCAGTTTTCTATCTATTTGAGGCACTGTCCGAGTAGAGAAAATGCAGAAGTGCATAAAAAACGAGTAAAAATGATGCTTCCCAAATACGGGAAAGTAGCCGTAATGACGATTACAGATAAGCAGTTTGGTGATATGGAAATATTCCATTCTAAAGTACGCGAAGATCCGCCACCTACTTACCAGCAGCTCGAGTTATTTTAGAAATAGAATGAAAAAAATGGATTTACTTAGCCCGATTTATTCTTTTTTTGCTCAATTTTTTATTTCTAAAAACAAAAATAATCCTCTGTCTGTCAGAGGATTATTTTTTGAGG # Right flank : CACTGAATACCATTGAAAAAAAATAAAAACTAATGAAGTAAAGCAATTTACAACTTCAAAGTGCTACTAAAGCCAATTTTACTAGTTGTAACTAATCACAAAGTTACCAAAATTTGAATTCCGATAGCACTCACTGAATATCATTGAAAAAACTAATGAAGTAAAGCAATTTACAACGTTCTTGGGGAAAAGCCCCATAAGGTACTCGTTGTCTTTATCCGCCTTGTAACCAAGTTCTAAAAATCTGATATAAATCAATGGTTTTACTTATAAAGATTTCGATGATTTTGCTTTTTCATTGAAAAAAGAATTCCTAAATTTGCATACTTCTTTATTGAAAAGGAATTTTTTACTTATCTGTTTAATCATTTTTTAATAAATTTTAATTATAAACAATGAATAAATCGGTTTATATAATCACTCCTGATGCTTATAGCGGCAAGTCGTTGGTAAGTTTAGGGGTGATGCAAATGGTTATGCGTAATACTCCCAAGGTAGGT # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTAACTAATCACAAAGTTACGGAAAATTGAAAGCAATTTACAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.21%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-2.30,-1.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-13] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [75.0-76.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : NA //