Array 1 29316-28387 **** Predicted by CRISPRDetect 2.4 *** >NZ_LOMM01000021.1 Enterobacter sp. SENG-6 Contig_29_length_66009_cov_118.461998, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 29315 28 100.0 32 ............................ TATTGCGGCCTCTAACGCGCTCTGAGAGACAT 29255 28 100.0 33 ............................ ACAGAGAGCGCCAAAGATGCGCCGATTACGCAA 29194 28 100.0 32 ............................ TGCAACGCAGCTTAGGCGTTCCTGGAAAATTC 29134 28 100.0 32 ............................ GAGCAGAAAGGGTTCACTCGCGAAGAGTACGA 29074 28 100.0 32 ............................ TCCTGGAGTTCGTCGTCAAAACTGGCCGCCTT 29014 28 100.0 32 ............................ TGCTATGCCGGACATGTATTGTTGGTGGTCCC 28954 28 100.0 32 ............................ AAGGACAAGCGCCGCGCAGCCGCTGAGAAGGC 28894 28 100.0 32 ............................ AGCCCGCGCAGCAGGTTCACTGATGCTTTCCA 28834 28 100.0 32 ............................ AGAACCTTCACCAGTGGAGCAACCTATTCTCA 28774 28 100.0 32 ............................ TCAACGGTAACACTGAGGTAACGAATTATGCA 28714 28 100.0 32 ............................ GATCAGCGCCAGCACGATAATAATCATGATGA 28654 28 100.0 32 ............................ TTTAGCCCCAGTAGTACGTGGTGAAGGTTATA 28594 28 96.4 32 A........................... CAGAACACAACCGGCTCATAGAAGCGTTTGCC 28534 28 100.0 32 ............................ AGATAAACTTGTCGGCGGGCACAGCACCGTCG 28474 28 100.0 32 ............................ GGGCAAAGACAGCTGCGCTAGCTCTGTGCGGA 28414 28 85.7 0 .........T..G..A.T.......... | ========== ====== ====== ====== ============================ ================================= ================== 16 28 98.9 32 GTTCACTGCCGTACAGGCAGCTTAGAAA # Left flank : ACTCCCACAAACGCAGCCCGTATGCCGCTGTCTCGGAGCATATCTGGAGGAAGTGAAAACCGGCCTCACAGAATCAATGCGTGATTTTCAGGTAGTGGAATTTGAGGACGACGCGGAGCAACCGCGACAAAAAGAGTGGTTGCTGGAGGATACCGAAACGAAATGCGACTACTGCCGGGCGTTAAACCATGTGTTGCTGGTGTCGCATGTTGACCGCGATATGTTGCCGCACCTGACGGGGCTGCTCCATGACATTACGCATTCAATGGCGGCAGATGTCTTTGCACCTCAACCTTCAGAAAAGATAATGCACATTATTTCCTGAGTGCGATCTGAGGCATCGGGGAAGCTCCTCTGACGCCAATGGTTTAACCCTTTTTTTGATGTGCACGTAACTCATTGATTTATATGGTTTGGATTTACGTTTCTGAAAAAAGGGTTTTATGCGCAAAAGTTGATTATTTTCTTTTCTAACAATAAGATGGCGTTGTTTCCTCTCA # Right flank : AATGAACAACATCGACAAACAGGCGCTACACGGTTCACTGCCGCACAGGCAGTACAATTGAAACCAATCCTCTGAAAGATTCATCCCAGCTATTTTAAAGTTAATACTATCAACCCCACACTCTCTATTTTTTACAATAAATAAAAAATAATTCACGAACAAATTATATTCTGGTGAATATATTATTCGTAAAAATAATATTTCAAGGCAAAAAATTAATTCTTCGCTAAATTATCACTGCAATTACTATTCATTTGATACCCATCACATTTGTTTTCATCTTATCTACGATAACATGTCGTGTATTCAATGTATTGAAATAAAAGCCCTTGCCATGCCCGTCAACAGCATCACTCCAACAGACTTAAAAACTATTCTTCATTCTAAGCGCGCCAATATTTATTACCTGGAAAAATGTCGTATTCAGGTGAATGGTGGGCGCGTTGAATATGTCACTCAGGAAGGCAAAGAATCGTTTTACTGGAATATTCCCATCGCCA # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [50.0-68.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 298643-299631 **** Predicted by CRISPRDetect 2.4 *** >NZ_LOMM01000022.1 Enterobacter sp. SENG-6 Contig_2_length_317997_cov_116.732628, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 298643 28 100.0 32 ............................ ACACCTCTACAGCGCTGGAGTTCGGAAACATC 298703 28 100.0 32 ............................ AGCGCCGAAGTGCCACATCTGCGGGTCTGTAA 298763 28 100.0 32 ............................ CCATGCGCCGAAGCCTCAGGCTCAAGCAGAAT 298823 28 100.0 32 ............................ AGTCTCCCAAGGTTTTAAACTTACGTTTGCCC 298883 28 100.0 32 ............................ GTAAAGACCCAAGAAAAAAAGAAGGTAATCAT 298943 28 100.0 32 ............................ TTTTGGTAAGTGCCAGAATCGCGAGAGGACGG 299003 28 100.0 32 ............................ AAATTCGCAGGGATTTATTGTTGCCGCTTATA 299063 28 100.0 32 ............................ TTTGGCGATAATTACGGATGGAGGTCGGGCGT 299123 28 100.0 32 ............................ GCAGCCAGACACGCTGGTGATGGCCGACATTT 299183 28 100.0 32 ............................ TATGCCAGTGCATTAATTTATGACTGGTATGC 299243 28 100.0 32 ............................ GGGCCGCGACCTCAGAAAGCATGTCGTCCATC 299303 28 100.0 32 ............................ TGAATGTCGGGATTGGTAGGCGACCTACTGCC 299363 28 92.9 33 .......A.........T.......... GTCACAGTACGCCGTGACGTGCTCATTTGGCTT 299424 28 100.0 32 ............................ GGAGGTAAAAACGCCAGACGAGCTGGCGAAAG 299484 28 100.0 32 ............................ GGCTTCGTAGTCCGGCGTCTGGTGCAACTCAA 299544 28 100.0 32 ............................ CACTCAAACCAACCGTCTGCAAAGCCGATTGC 299604 28 92.9 0 ..............T.........A... | ========== ====== ====== ====== ============================ ================================= ================== 17 28 99.2 32 GTGCACTGCCGTACAGGCAGCTTAGAAA # Left flank : TGAGAAGAGTCGAAGTGTGTGATAGCGGCTTTAGGGGCGGCGAGATAGGTATTCACGACAGGGTTCATGGTGTATCTCCACGGGGTAACCTGCATAACGGACGTTGCCCAGCGTCAGGCAACGACCTGCCCGGAACACAATTTATCTGTATATATATACAGTATTTTGAGTTCGTTCAGAAAGTATAATCAGATCGCCCGGCTTCGCCAGAGAAAATAGAAAGTTTTTAATTAGTTGATTTTTATATATTTATTTTTGTTTTGTCTATGTAATAGGTTGAGGTGGGGAACCCGGATTTCATCATAAAGAGCATTTGTGAAGAAATACGCAAGGGGGTATTGAAAGGTCTGTCCTGACGAAATGCATCAAAACCCTATTTAGGGAAGGTCTTGTAAGTTGTTGATTTATTAAGGATGAATTGAATGAGTTGAAAAAAGGGTTAAAGGCATCAGAATTGATTATTTTCTTTTACGACAATACGATAGCGATGTTTGCTTTCA # Right flank : AGAATTAACCGACAGTTCCGGGAGCAGAGACATTTTTACTGCCGTTCAGGAAGATTTATAGCAACCTGGCCGTCAACAATGCCGGGTGGCGCTGCGCTTACCCGGCCTACAATCGGCATTAATATCAAGGAATTGCATTATTTATCGTAGGGCAAAATGCAAGACGCGCACTGGATTACCAGGCTAATCCATGCATCATATGGCTCAATTCTATTGGGTGAAGTGAAAAAGCAATGACTGGCAAATAGATAAAACCCCACGTCAGGGCGCGGGGTTTGCTTAGTGATTACTGAGCGGCAAACAGACCCAGATGTTCTTTAGCGTAAGCTTCAAAATCGGTGCAGCCGCCAATGTGTTTCTGATCGAGGAAGATCTGCGGTACGGTTTCAACCGGTTTACCCACGGTTTTTTCCAGATCGGCTTTGGTGATGCCTTCTGCGTGGATATCCACATAGCGGAAGTTAAAGTCATCACGCTCTTCAGTCAGTTTTTCAGCCAGC # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [68.3-56.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //