Array 1 358036-358541 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAJCJH010000001.1 [Clostridium] symbiosum strain DFI.7.73 BGLBMLMH_1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ==================================== ================== 358036 33 100.0 36 ................................. TTTCCTTCTGCCAAAAGTGTCGCCCGCTGGGATGCA 358105 33 100.0 35 ................................. TCTGACGATGCGGGAGGATCTGACCGTGGTTTTTG 358173 33 100.0 34 ................................. TATTATCCTTTATATCAAATGGCAGTACAGTACC 358240 33 100.0 35 ................................. TATTTATAATTTGTGTATTAATTGATCCCAGTTCA 358308 33 100.0 33 ................................. TTTATTACCCTGATTCTGATTTTCAATAATATC 358374 33 100.0 33 ................................. AGGTACAAGGATTGATTGCTGAGGATTTATACT 358440 33 100.0 36 ................................. AGATCTAAAGCAAATGATTCTGTGCTTCGGGCAATT 358509 33 81.8 0 .....................ACAA...A...G | ========== ====== ====== ====== ================================= ==================================== ================== 8 33 97.7 35 GTCACAGTCCGCGAGGACTGTGTGGATTGAAAT # Left flank : TTTCCGATTGATATATAAAATAACAGAAAGGGTGTTATAAACCTGACACAACTTTGGATAAGCTAATTCTTAAGGGTATTGTAGAATAGGGAATTCAGAAATGCAGAGCGTAAGGAGATATTCTTTATGTTCTTTAGATAGTAAAGATAGCTTTGAGATATGCTATCTAGATGAAAATATGTGGCTGAATGATGAAGTTGTGTGGAAACGTTGGCAGAAAGAAATAGAAACTATTGTTAAGTGCATACTTAAACAGTATGTGTTGTAGCAAAGACTGATTGAGGATATGGAATAGGCAGTTTGAATTAATTATAATGAAAATGAGGTGTAAGAATTCTGGTGCGAATCCCTAGCAAACATAAAATACCCAGGAGATTCGCACCAGAATAAGGCATATAATATTTGATTTCGAGTGAAGATATAGTATAATATGAGAAGATGATTGTGCATTATGTATGAGAATGCGCTATAATTGGCGGAGAATATCATGCATAATTGCT # Right flank : GTAAAGAAGTAAAAAGTAAGATCCCATAAAAAGTTCTATCCAATAAGCACATTCATACGCCGGAGTGAACGGGAAAGGAAGAAGCTATTTATGCCGGGAAAATTACTTCTAACATGTACTCAGTGCGGCAGGCCTTTCTTTAATGAAGGGGAAAAAGCATATTACGATAAACATCATTTATATCCCCCTAAACGTTGTAAAGACTGCCGCAAAATAAAAAAAGAAAGATCCGACAGACTAAAAAAAGAAGCGGAAGATAGAGCTGGGCAGGAAAGAAAAGAGAAAGAAAGTGCCCGTATCTTATCTTCTATGCCGTATCAAAAATATAGCTTGGCAGAGCTGCCTCTGGATCATTCTAGGCGTACGCTTTACATTATAGGAAATGGCTTCGACTTAATGCATGGTGTCCCGTCAAGATATACGGAGTTTCGGGACTATCTTGGAAAACATTCTGAGCTTAGAAAACAATTGGAGGATTGGAACCTGAAAGAGGATTTGTG # Questionable array : NO Score: 9.15 # Score Detail : 1:0, 2:3, 3:3, 4:0.89, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCACAGTCCGCGAGGACTGTGTGGATTGAAAT # Alternate repeat : GTCACAGTCCGCGAGGACTGTGTGGATTGAAATA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [8,9] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCACAGTCTGCGAGGACTGTGTGGATTGAAAT with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-7.60,-5.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [63.3-66.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.78,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 45258-45690 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAJCJH010000013.1 [Clostridium] symbiosum strain DFI.7.73 BGLBMLMH_13, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= =================================== ================== 45258 33 100.0 33 ................................. ACATGATTTATAAACGTAGGAGGCGATCACATG 45324 33 100.0 34 ................................. AAGCATCTGTTGGATCTTAGCGTAGTCAATCGCC 45391 33 100.0 35 ................................. CGGCGCATCTAAGTGACTCGTTTTACCAGAAAGAA 45459 33 100.0 35 ................................. GTCTGGCGATGAGACCTATTTCAACGTCGGTCTTG 45527 33 100.0 33 ................................. ACAGCAGATCGTAGAACATGTTGCAAGACTATT 45593 32 90.9 34 ..............-......A.A......... ATGCGAAATGTAAAAATGGAGCGGGATGCTATCA 45659 32 81.8 0 ...A.......A..-......A..A...A.... | ========== ====== ====== ====== ================================= =================================== ================== 7 33 96.1 34 GTCGTTCCCTTCGCGGGGAACGTGGATTGAAAT # Left flank : ACGCATATCCGCCATTTTTGTGGAAGTGAGGAGAGAATTTGCTGGTATTGATTACATATGACGTGAATACGGAGACAGCCGGAGGAAAAACGAGACTCAGAAAGGTTGCCAAGCAATGTGTGAACTACGGTCGCCGAGTTCAAAATTCAGTGTTTGAGTGTATCTTGGACAATGCGCAGTGTGTGCTGCTGAAGTCGATTTTGACAGAGATTATAGATGAAGAGGTCGACAGCCTGAGGTTCTATTATCTGGGCAATAAGTATAAGACGAAGGTGGAGCATATAGGGGTTGATAAAGGAATTGCGGCGGATGACACTCTGATTTTGTAGTGCGAATGTGAAGCACACATGAAAATCCAGGGGGATTCGCACCGGAAAAAGTGCACAAAAAGGGGAGAGAGAGTAGATGTTTGGTTAGATTCTTGAGTGGTATTATGCAGGAAATATTCTAATAATACAAAAATGTGGCTGTGTTGTGATATAATATTGGATATATTTGCT # Right flank : TCAAAATCTTCCTCTCCCCTACGCAATACTCTCTATCTGCATCAAAATATCAATACTATGCAGTATAAACAAAATGAAAGCCAGTAACTTTAATTACTGGCCGGCTATAGAGATTTACAGACTCAAAGTAAGTGAATCTAAAAACTCCTCCATTTTCTAATAATAATTACATTACTGTTAATTTAATTTTCCAGAGCAGATAACAAAGCTTCATTGCTCCTTATCCCACCCTTCACTCAACATCAACCCCATGAAACCCAAAAAAATTCCGTGCCGCCTGCGACAGCGGATATTCCTTATTAACAATAAAAGCACTGGTAATAAAAAGATTTTCATCCGAAAAATGTTTCACCGACAGGTCATGAATATGCTGAAAATCGGCCGCTGTCAGGGAGGCCAGGGCAACTGTGCCGAAGGAGCGGGCCCATTCGATTGCGGTTGCATTGGAAGAAGTGATAATTGAAATATTCGGTGCCAGCAGGCAATGCCCAAAGGAAGAG # Questionable array : NO Score: 9.06 # Score Detail : 1:0, 2:3, 3:3, 4:0.80, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGTTCCCTTCGCGGGGAACGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [6,9] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-6.20,-4.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [76.7-61.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : NA //