Array 1 48130-48641 **** Predicted by CRISPRDetect 2.4 *** >NZ_BLJW01000001.1 Pseudomonas yangonensis strain MY101 MY101_contig_1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 48130 28 82.1 32 T.........TAT.C............. TCTATCCCCATTTCGATTCCTGGGATGCCGCA TG,G [48133,48136] 48193 28 100.0 33 ............................ CTGCACCCGATGGACCGTGCGGCCGTGACCTTG 48254 28 100.0 32 ............................ AGCACCGGAGCGACAACGGCGAAGTGCCCGCC 48314 28 100.0 32 ............................ AGTTGCTGGCCGCGCCGTACGCGCCGTTGCGC 48374 28 100.0 32 ............................ GCCGAGCGGCTGCTCGCTGGCGTATCGCAGGC 48434 28 100.0 32 ............................ GTCACCGTCAATCGTTGATCTATCGCCAGAAA 48494 28 100.0 32 ............................ TGGCTCAAGCTGGTCCCGGCCTGGGCCTGGCC 48554 28 100.0 32 ............................ TGCACCCAGCGGCGCCCGACGTTGACGGTGAA 48614 28 78.6 0 .............C.......C.G.GCC | ========== ====== ====== ====== ============================ ================================= ================== 9 28 95.6 32 CTTCACTGCCGTGTAGGCAGCTCAGAAA # Left flank : GAAGCACTGCAGCAAGGGCGGGCCGATGAAGTGCTCCAGCGCGGTCAGATCCGGCTCATCGATCCCCAACTTAGCTAGGGCGTACTGCACCGAACGGGTGATGCCCTCGCGCGGGTCGGTGAGGGTGCCGTCGAGGTCGAAAAGGATGGTGGAGTGATGCATGAGGCTTCAGGCTTCGGCAGTTCGGGGGGCACACAGCATAAGGCAATTGCCGGCGCCACCCAACGCCGCGCCATCCGAGCGCGGACCGTGCCAAAGCCGGGCATGTCGCTGTCACCCGATTCACAAGCGGGCACGCCGGCAAAAACACCGCGACGAAATTGCTGAGCTGCCTATTCGGCAGTGGAGGTTAAGCCCTTGCAGTACTACCTGGAGTTTTATTTCTGAGCTGCCTATTCGGCAGTGAAGTTCAGCGGTGTTATGAGCCGCGCTCGCGAGCCTTTCTGAGCTGCCTATTCGGCAGTGAAGCAGAGTCGCGCTGTACACCGGGAATATCTCTA # Right flank : CTCACACACCCAGCGCGCGAAACATCACATAGCAATCCACCAACCCATGCCTGGCGTGACGGTAGACCTTGGGTAAGGTGCCGACTATCTCGAAACCGTGCTTCTGCCATAGCGCCACGGCCACCGTGTTGGTGGCCACCACGCTGTTGAACTGCATGGCGCTGAAATCCAGTTCGCGCGCCACTTCCAGCGAATGGGCGCAGAGCCGGCCGGCGATGCCGCGACCGCGTGCAGCCGGAGCGGTCATATAGCCGCAGTTGCACACATGGTCGCCGGGACCTGCGGCATTGGCCTTGATGTAGTAGGTGCCGAGAATCTGCCCATCCTGTTCGGCGACGAAGGTGGCGCGCGGCAGTTCGACCCAGAGTTTCCAGGCCGTGTCGCGATCCATGTCGGGGTCGAAGGCGTAGGTTTCCTGCGCCTGCACCACGTCACGGATGATCGGCCAGACCTGGTCGAAATCGGCCACCTCGATGGGGCGGATGATCAGTTCGCCACTC # Questionable array : NO Score: 6.12 # Score Detail : 1:0, 2:3, 3:0, 4:0.86, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTCACTGCCGTGTAGGCAGCTCAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [7,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGTGTAGGCAGCTCAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [46.7-41.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.65,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //