Array 1 2591690-2590006 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP023483.1 Brochothrix thermosphacta strain BI chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 2591689 36 100.0 30 .................................... TGTTTCAAAGTTAGGTGTGTCAATCGTTGT 2591623 36 100.0 30 .................................... TATTTAGTGGCACACCCGTTTTTTTACTAA 2591557 36 100.0 30 .................................... AGGAACGTCCAAAGGAATAATTATCATGAA 2591491 36 100.0 30 .................................... TGGTTTCAGAGAAACGGACATGATGACGGA 2591425 36 100.0 30 .................................... ATCACTAAAAGCAATTTCCTTATCATCTTC 2591359 36 100.0 30 .................................... TACCCAAAAACGCAAAATAACGTCCGACAA 2591293 36 100.0 30 .................................... TGAATCAACAAAAGCGCTCTATATCCCTGA 2591227 36 100.0 30 .................................... ATATCTCAGGTGATTTATACCCAATTGAGT 2591161 36 100.0 30 .................................... TAATGTGAATGTCACGACCGCTGCTCCTGA 2591095 36 100.0 30 .................................... GATGTATCTTTATAACAATTGGTCTTCTAT 2591029 36 100.0 30 .................................... TTTTAAGAATAATAACCAATACTGCATATC 2590963 36 100.0 30 .................................... ACCACTAGCTACCAAAAAAGGCTGGGTTAT 2590897 36 100.0 30 .................................... AGGAACGTCCAAAGGAATAATTATCATGAA 2590831 36 100.0 30 .................................... TGTACCTTGCTAGGCAAGCCTCGGAACTAT 2590765 36 100.0 30 .................................... CCATACCATGTACATCTTGACCGACTTATC 2590699 36 100.0 30 .................................... TACGGCATTCGGTATTCCGTTGTCTCGTTT 2590633 36 100.0 30 .................................... TTTAAATTGGGAGCGAGCTAATAAAAATGT 2590567 36 100.0 30 .................................... TGGCTAACGGAAGCAGAAAACACAAAACAT 2590501 36 100.0 30 .................................... ATATGGTGCAACAGGTATGTTAGGTGTTAT 2590435 36 100.0 30 .................................... ATATGGTGCAACAGGTATGTTAGGTGTTAT 2590369 36 100.0 30 .................................... CACGCATTTCTTTTTCGTAATCTTTATTAA 2590303 36 100.0 30 .................................... CAAGTTTCCAGGATATAACAATCGCCTTAA 2590237 36 100.0 30 .................................... CGGTGAGTATTCGAGACTATCAAAAGTTAT 2590171 36 100.0 30 .................................... ACCTTTTGCGTAAGCTGGTACTTTCCAAGT 2590105 36 100.0 30 .................................... AGCGCCTCGGAATATCATATAATTCCCACG 2590039 34 88.9 0 ..........................--.....G.G | ========== ====== ====== ====== ==================================== ============================== ================== 26 36 99.6 30 GTTTTAGAGCTGTGTTAAATTGAATGGTATTAAAAC # Left flank : TATTACTAAAATTTATAAACAGCTAGAAAAACAGTATCATAATAATAAGGAAATCGATCTTATTGCTGATCAATTAATAGAGCTCCGTCAACTGATAGGCATTCAGTTAAATGACTATGATTTACCGCTACAACTGAATGAAGAAGTAAAACTATCTTCGCTTTATAAGCTGTTTAATGTTACTATAGAGGTTGAAACAGAGTCGATTTTGGATAGATTATTACTACTGATTGATCTTGTCGCACAATTGAAAATCGCTCGTATCATTATTTTGAATAATGTAAGGTGTTATTTTGTAGAGCAAGAGCTTCTAGAAGTATACAAGTACGCACTCTATAAAAACATAAAGCTATTACTGATTGAATCAACCTTCAAAAAAGGCAAATTGCAATATGAACGAAAATTACAAATTGATAACGATTATATCGAATTTTGGCAGTAATACCTTCATTTTTGAATCGCGCAACGAGAGCAGTAATGACAAAATTTCATTGTTTGAG # Right flank : ATTGACGTCCATTGATATAATGGATGTCTTTTTTTTGTTATCTATAACTTTATTATGTCAACTAAATAAAGGGCATTTAAAATAACATGACAAACGTTGTTATGCAAGGTATGATAGAACTAGATTAACATTACTTAAAGGTGGTTGGAGGATGACTGGATTAAAAATTAAGCAATTTAAATTAGATAAACAGGCGATTAAGCAAATTAGTGATGACTATATTGTCGACTATCCAACTGTTTATTTGTTAAATAATGATAAAGAAGCGTATATCGGCGAAACTGTCGCGCTGAAGAATAGAATGCGTGCTCATTTAGCCAATCCGCAGCGCAGTAAACTTACAAAAGCTCATGTCATCAGCCACAATGAATTTAATCAATCCGCCACCTATAATATTGAAACGAAGCTGATTAATTACTTTTTAGCGGATCAAAAATATATCTTACAAAATAAAAGTCAAACGGTTCAAAGTATCACTCATAACTACCATAATAAAGCTT # Questionable array : NO Score: 3.24 # Score Detail : 1:0, 2:0, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAGCTGTGTTAAATTGAATGGTATTAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:72.22%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [0.00,-1.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [75.0-65.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.78 Confidence: MEDIUM] # Array family : NA //