Array 1 93-2469 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADPGT010000053.1 Bacteroides xylanisolvens strain 1001095IJ_161003_A6 NODE_53_length_33796_cov_21.5489, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ========================================= ================== 93 37 100.0 35 ..................................... GGTTATTATATCCTTACTTATGGTTGGGATGTTAT 165 37 100.0 37 ..................................... AGATGCTGGCTAATGCGGTTATGACCGCACCGTTATC 239 37 100.0 33 ..................................... TGAAAAGTAAACAATATACATGCTTACAAAGAA 309 37 100.0 41 ..................................... TGTTAGACATTGAGGTGCTGATTAACTCTTATCTAGGAGTA 387 37 100.0 35 ..................................... CGAACGTACTGGACGAAGCGGACAATTACACCTAC 459 37 100.0 35 ..................................... GAACATGGTACTATTGTATGTGATGCACCTGAAAT 531 37 100.0 40 ..................................... GGTATTGTTGGTGTAGTATTTAGTGACCCTATTTAGTGGT 608 37 100.0 36 ..................................... GGTAAGTTCTTCTTTGCATGTGGACAAATTGTTGGT 681 37 100.0 40 ..................................... CCGAAATAGATTTGCTTTTCATCAAGCGGATAAAGCAAAA 758 37 100.0 36 ..................................... ACATACTGGTTAACTCTTATCAAAGAGTATCACAAC 831 37 100.0 37 ..................................... AATTACTGTCGTGAGATAGAACAGAACTTAATTTAAT 905 37 100.0 34 ..................................... TGCTGATGAAACTGCTGATGCTCGTATAGTTGAC 976 37 100.0 37 ..................................... AGAATGGGGGACAATCTTATATTCCATTATCTCAAGA 1050 37 100.0 34 ..................................... AACAGCTAACGCTGATGAAACTGCTGATGAAGCT 1121 37 100.0 34 ..................................... TTTTCTCTTTTTCTTATAAATCATTTAGTTTTAT 1192 37 100.0 35 ..................................... TTTTTCTTGTTACAAGTTATCAACAACATGTCTAA 1264 37 100.0 37 ..................................... CTCTAATGAACTTAGTTTTAAATTCAATAAAAAGATG 1338 37 100.0 36 ..................................... TCTTTTTATCATGCTTATTCAGATGTATTCATTAGT 1411 37 100.0 34 ..................................... TAATCTGTTAATCTGTAATCCATAGGATAGTCAG 1482 37 100.0 36 ..................................... AGATTTTATTTGTAGGAGTGATAACAATTTAATAGA 1555 37 100.0 35 ..................................... TTCTACAAAGTCTATTTTAGGAGTTAACCCAATCT 1627 37 100.0 36 ..................................... CCAAAAGACAACCAATAACAATACTAATATGGATAA 1700 37 100.0 35 ..................................... CTGATGTACTCGTCAATAGTGATGTCTATCTTTTG 1772 37 100.0 34 ..................................... GGTGGGAGTTTGAGCGCAAAGAATGCGAATGGAA 1843 37 100.0 39 ..................................... TATTCCTAATCTCGCTAATAAAGTAGAAGTAAATCACAT 1919 37 100.0 39 ..................................... AACTACTGGCGACAGTCATTCTTACGGTTTCCGTAAACA 1995 37 100.0 37 ..................................... TGTGTCTTTCTTTTTTATCATGCTTATTCAGATGTAT 2069 37 100.0 36 ..................................... TAGGATGCACATTGGTTGAACAGTTGCTAACCGATT 2142 37 100.0 34 ..................................... GAAGATTAATATTGCAGCCGCAAAGGCTCGTAAT 2213 37 100.0 38 ..................................... ACAGTTTTTAAGGGTTGGCACACGTCAACCCTATCTGT 2288 37 100.0 37 ..................................... TGCAGCCGCAAAGGCTCGTAATATTACGCTTACAAAG 2362 37 100.0 34 ..................................... GCCTTAACAGTTTTTAAGGGTTGGCACACGTCAA 2433 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ========================================= ================== 33 37 100.0 36 GTCTTAATCCTTATTATACTGGAAGTTACTCTATAAG # Left flank : GGAAAAGGCTAATGACTAAAAAGGGATCATTAGCCTTTTTATTTTAATACACTATATAGAATCGCGGAGACGCTTACGTTAATACACTTATTG # Right flank : GAGTTATCATTATAATCACGTCATTTTCAACAGAAAACAACAGAAAGCATAAAAGAGTCACCCTAAAAAAAGAAAAAAAGTTCTCTTTTTAAAAGCCTGCAAAGATAAACAATATTTCAAAGAACGAAAACATAAACATTCTAAAAAAACAGTGTATTCTTAGAATTCATTATAATATCAATATCTATTGACTTCCCAATAATCTTCATAGAACGAAGAAAGTCTGTAGATATCGGTACGATCATAATGCTATCATGATTATCATAACAAGCCTGCACTTCTGATAAATCTAAACGAATCTGCTCATAGTCCTGATTATTCAAATCTGCCAAGAAAATAGAACGTTGAACACGAAAGCATCCTTTCCTCAACAAGTACTTAGCAACTTGATTACGTACTTTATTACTTTCTATATCGTACATGACAAAAAATAACATATTCAATGATTTTTTTTTAGGAACATTTAGTAAGCCTATCACCCGTTTGATACGTTCGTCTAA # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTTAATCCTTATTATACTGGAAGTTACTCTATAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.27%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.60,-1.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [68.3-70.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.37,0 Confidence: MEDIUM] # Array family : NA // Array 1 51503-51027 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADPGT010000042.1 Bacteroides xylanisolvens strain 1001095IJ_161003_A6 NODE_42_length_51609_cov_25.54, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ======================================= ================== 51502 37 100.0 33 ..................................... TCTCGTTTCCTGTTACTTCAATTACTACTTTCA 51432 37 100.0 37 ..................................... ATTTTAAAAAGTCTGATATATATATTAACTCATAAGA 51358 37 100.0 37 ..................................... ACAATTACGCGATCAGGACAAGGAGACCGTAATATAG 51284 37 100.0 35 ..................................... ATTTCGATAAGAGGCATTTTGCGTACCATATCAAG 51212 37 100.0 39 ..................................... TTTCGGATAGCTTGATACTATTGTCAACCACTATTTGTT 51136 37 100.0 36 ..................................... ACCACCGTACGTGCCGTTCGGCATACGGCGGTTCCT 51063 37 94.6 0 ..........G......................T... | ========== ====== ====== ====== ===================================== ======================================= ================== 7 37 99.2 36 CTTATAGAGTAACTTCCAGTATAATAAGGATTAAGAC # Left flank : TAATGCTTCATTTTTATACATCGCAAAAATATAAGAATGAAAAAAGGGCGACAAGATAGAATCGCGGAGACGCTTACTGTATTAACATTAATAATAGTAAGGTGAG # Right flank : ATTGCATTGTTAATCTCTGACAAAGAAACAGCTTTCATAGAGTTGCTTCCAGTATAACCTAACCTTAAAATCCGCGACTTAATCTAATAAAACAACCTCTTTGGGCGGCATTTTTTTTGCTGTAATGGATAATTTGTCAGACCTTATATTATATAGTGAACAATTGGTTGATTTCTGCCACCAATAAAAAACGGTAAACCATTTGTGAGACGAATTACAACGTGTTTTTGTTTTGTATACGAAACAAAAATACTATATTTGTATTTTATATATAGAACAATACCAGATATGGACAAGGAACAAATAAAGCAGATAATTGGTGAAAATCAAGAGTTTGTCAAAGATATAACATTTATGGAACGTCCTTTCACTTTTGAGGATGCAGGTAATTATGTGTTTTTAGGTATTCGTCGGGCCGGAAAATCCTATTTGATGTATCAGCGGATACACCAACTTCTGAAAAAAGGGCATACGATAGAAGAAATACTATATATCAACTT # Questionable array : NO Score: 3.22 # Score Detail : 1:0, 2:0, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTATAGAGTAACTTCCAGTATAATAAGGATTAAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.27%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.60,-1.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [65.0-60.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.41 Confidence: LOW] # Array family : NA //