Array 1 258624-257862 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_SSNB01000002.1 Streptococcus oralis strain ATCC 9811 Contig2, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence                     	Spacer_Sequence               	Insertion/Deletion
==========	======	======	======	====================================	==============================	==================
    258623	    36	 100.0	    30	....................................	AAAGTTCTGCTAGATTCTGTTATTGCTTTA	
    258557	    36	 100.0	    30	....................................	AAAGTTCTGCTAGATTCTGTTATTGCTTTA	
    258491	    36	 100.0	    30	....................................	GGATGACTGGACCGATAACACTCTGGACAT	
    258425	    36	 100.0	    30	....................................	TCATCCATGATATGTTCACAATTTGGATGC	
    258359	    36	 100.0	    30	....................................	GGTCATTCTCACTCTGTCCGCTATTCGTAC	
    258293	    36	 100.0	    30	....................................	CTTTGTTTCAAGTGGAGTTATCGATGAAGG	
    258227	    36	 100.0	    30	....................................	AAAATTCCTCGAAGGGTTCAAAGCTATTAT	
    258161	    36	 100.0	    30	....................................	ACCGAGGTTACACCCTCCAAGCATTTCCGA	
    258095	    36	 100.0	    30	....................................	CTTTGTTTCAAGTGGAGTTATCGATGAAGG	
    258029	    36	 100.0	    30	....................................	AAAATTCCTCGAAGGGTTCAAAGCTATTAT	
    257963	    36	 100.0	    30	....................................	ATAAATCGGGCGTGCACATTTATGGTACAT	
    257897	    36	 100.0	     0	....................................	|                             	
==========	======	======	======	====================================	==============================	==================
        12	    36	 100.0	    30	GTTTTTGTACTCTCAAGATTTAAGTAACTGTACAAC	                              	       

# Left flank :   GGATGATTTTTTATCCTATAATGATTTTGTTGAATGTTGCGAGAAAATGGAGTTTCTTACTAATCATAGTAACTTACTCTATATAGTCTCATTTCCTTCAAATGAGGGTTATCTTCATGTAACTAAAGAAGTACTAGAGGAAATCAATATCGTTTCCGATTATGTAGATCATTTTTATTCCTTAGAATTTATGTATGAACGATTTATTAATCAATATCCAATAAATCAAATACCTGATGAACAAGACTTTTTAACTTCTTTAAGAAAGGTTGGCCCCTATTTATTTAGTTCTGATATTCTTCATATGAGTTTATCTATAGAAGATCAAGTAGCATTAAAGATTTTAAACAAATTGTATCAGTATGAAATGAAAACAAAATTCCGTATTGAAGCGGTCAATCCAATGTTATTGAAATATTTGAAAGAATAGTATTGACGAGTGAGATTTAAGGCTTTATAATGTTTTTGAGGGAACAAAAATCAAAATTGACGAATTTGAG
# Right flank :  AGGCTAAATTGGATCCAGGATTAGCAATTGGAGCGAAAACGCTCTCTCTTATTTCTTACAGATTAGCTCCCCAGTATGATATAATGTCATTTAGAAGAAACCAGAGAATATAGGAGTCGAAACGATGCTAGCTATTTGTATCGATTCTATATGTGACAAGACAGGAACCTATAAGTTGTTAAGAAATTATTCATCCTTACCTTTCTCTTTAATCCAATCCAGAATAAAAGATCATGTCACGGTAATAGAAGTAGATATGTTAGATTTGGACGAATTGAAAAAGGTTAGAGCCCTCATCCATGAGTTGAGTGCCATTGGAACTAAGGTTACGTTGAGAGATTCGACTGGTATTATCACCTTAGAATTTTTAAATAATATTATTTCTACCTTCGAAGAAATTGTGGCTGAAAGAGAAGAACTGGATGCTCTGATGTTTGAGGGGGAAGAGTGATTGTCACATTTTCCAGTGAATTATACATTCCCAAGTTAATTTTTAGTAA

# Questionable array : NO	 Score: 6.26
# 	Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTTTTGTACTCTCAAGATTTAAGTAACTGTACAAC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:69.44%AT]
# 	Reference repeat match prediction:         R [matched GTTTTTGTACTCTCAAGATTTAAGTAACTGTACAAC with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  F [-1.20,0.00] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      NA [0-0] Score: 0/0.41
# 	AT richness analysis in flanks prediction: R [60.0-71.7]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0.37,4.77   Confidence: HIGH] 

# Array family : II-A/C [Matched known repeat from this family],   
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