Array 1 1080563-1078550 **** Predicted by CRISPRDetect 2.4 *** >NZ_LR134292.1 Streptococcus equinus strain NCTC10389 chromosome 1, complete sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 1080562 36 100.0 30 .................................... CGCATAGACTGTGTTCGCATTAGAATAATA 1080496 36 100.0 30 .................................... AGAGTATGACGATAAAGGCAATGCTACCAA 1080430 36 100.0 30 .................................... ACCTGTAGTTAATGAACACAATAGGAACGC 1080364 36 100.0 30 .................................... TGATTGTCGACGGTGCTATCACAAGTACTA 1080298 36 100.0 30 .................................... CTGACGAAGATTTGTTTTACGAATTAGCGA 1080232 36 100.0 30 .................................... AAATCTTATTTGATTATGTGTCTAACAACT 1080166 36 100.0 30 .................................... AGGATGACGGATTTCCGGAATTGATGGACG 1080100 36 100.0 30 .................................... TGACGTAGTTGATGCAATTATTGATGGTAT 1080034 36 100.0 30 .................................... AGGAATGAATTATCTGGAATTAGAACAGCG 1079968 36 100.0 30 .................................... CAGATGATTGTTTTAAGTCGCTAGCGTTGT 1079902 36 97.2 30 ...................................T AAACACATTTGACAATGTTCCCGTCATGGT 1079836 36 100.0 30 .................................... AGGAATGAATTATCTGGAATTAGAACAGCG 1079770 36 100.0 30 .................................... CAGATGATTGTTTTAAGTCGCTAGCGTTGT 1079704 36 100.0 30 .................................... AAACACATTTGACAATGTTCCCGTCATGGT 1079638 36 100.0 30 .................................... GAATATGTTTGAGTCTGTGAGCATTATTCC 1079572 36 100.0 30 .................................... TGAAGATGTTGAGCAAATCACACAAGACCT 1079506 36 100.0 30 .................................... TGAAGATGTTGAGCAAATCACACAAGACCT 1079440 36 100.0 30 .................................... TGCAGTGGCTGGTTTCAAACCACTACAAAA 1079374 36 100.0 30 .................................... CAATCAAGAAATTTTAGACAGAATTGCAGG 1079308 36 100.0 30 .................................... TTACTTTGAATTAATGATTCTGTTGTCATA 1079242 36 100.0 30 .................................... TTCAGATATTGGACGGGGGTATTTAAATGA 1079176 36 100.0 31 .................................... AGCCCCGCTATATAAGTAGGCTATTCGCCTT 1079109 36 100.0 29 .................................... ATTCATCTTCTTTATGTTTCGGCAATTGA 1079044 36 100.0 30 .................................... TAAAAACATTCAAAACCAAGACTTTGACAC 1078978 36 100.0 29 .................................... GAAATGCAAAGCTACTATAACATACCTGT 1078913 36 100.0 30 .................................... TAGTCTGTTGCAACAGTTCCATGTTCTAGC 1078847 36 100.0 30 .................................... AATCAGGAATGAATATAACACAATATCTAT 1078781 36 100.0 30 .................................... AAGGCGCTAAGAATGTTGCGATTTTGAACG 1078715 36 100.0 30 .................................... CGGTTCTTTTGGACATGAGTCAATGAATAA 1078649 36 100.0 30 .................................... CCTATGTTGCGCTCCATATCATTCTTTGGT 1078583 34 83.3 0 ......................CAAC...--..... | ========== ====== ====== ====== ==================================== =============================== ================== 31 36 99.4 30 GTTTTTGTACTCTCAAGATTTAAGTAACCGTAAAAC # Left flank : GGATGACTATCTTGATTATTCTTCTTTCATAACTATTTGTAAAACTATTACGCAAATGACTGAGAAATTTCCTAATTTTTATTGTACAATTTTCCCGTCAAATGAAAGTTATTTATATGTTACTAAAGAAACAGTTGAACATGTTACCATTGTTTCAGACTTTATTGAATCATTGTTTGACTTAGATTTCATGTATGAAAGATTTATTGGTAGATACCCATCAAATAATATTCCAAGTAAAAGTGAGTTTTTGATATTGCTTCAGAAAAATGCAAGTTATCTGTTTAGTGATCAAATTTTATACATTAGTTTAGGTGTTTCAGATATGGTAGCCATCAAGATTTTAAATAGTTTATACCAGTATGATAAGTCTGTCGTATATCCAATACCTGAGATAGATCCGCTAGAAATAAGCTTTTTAAAGGACAAAGATTGACTTTTTTGCCTAATCAAATTATAATCGATTTGTAGGATACAAAAACTAAAAATGACGATTTGAG # Right flank : CCCACCTAGTTCGTCACTGGGTGGGGTAATCTATGTGGGTCATAGGTTTGCGATAAGTTGAGTTTTTATTACCTTTGGTTAAATAATAGCGCTTTCTGCAAAAATTGTAAAATGATTTGCGGTAGCTGGTTTTAGTGATATTTATCGTGCCTAGAAAACTTTTTATAGCACCAGTGGTGTTTATTTGTTATAATAGAAATAATGAATAATTGTATAGGATTATAGATAGATGGATATTCAAGAATTAAAAAAACGACAAGAAAAGATTCGCAATTTCTCAATTATTGCGCATATTGACCACGGGAAGTCAACTTTGGCTGACCGTATTTTGGAAAAAACGGAAACTGTCTCTAGTCGTGAAATGCAAGCTCAACTCTTGGATAGCATGGATTTGGAACGTGAACGTGGTATCACAATCAAATTGAATGCGATTGAGTTGAATTACACAGCTAAAGATGGTGAAACTTACATTTTCCACTTGATTGACACACCAGGGCACG # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTTGTACTCTCAAGATTTAAGTAACCGTAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:69.44%AT] # Reference repeat match prediction: R [matched GTTTTTGTACTCTCAAGATTTAAGTAACCGTAAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-1.20,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [50.0-73.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.18 Confidence: HIGH] # Array family : II-A [Matched known repeat from this family], //