Array 1 41807-41220 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_QNVT01000014.1 Chryseobacterium pennae strain 1_F178 CONTIG014, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence                                	Spacer_Sequence               	Insertion/Deletion
==========	======	======	======	===============================================	==============================	==================
     41806	    47	  91.5	    30	....T......T...T.....................C.........	AAGGATCTATAGGTCGGGTTATTTCAGCAT	T [41790]
     41728	    47	  95.7	    30	....T....................C.....................	TAAAGAATCAATGATCTGCATACTGTTGTT	
     41651	    47	 100.0	    30	...............................................	GCGGCCAAACTTCGCTACATAGCAAATTTA	
     41574	    47	 100.0	    30	...............................................	TTAATAAGACGTTTGGGATTAAATCGTACG	
     41497	    47	 100.0	    30	...............................................	CAAAATGTTTTGACGTTAGCGCTAATCGTT	
     41420	    47	 100.0	    30	...............................................	AAATTGTTGCAAGACAACGACGAAGCTAAC	
     41343	    47	 100.0	    30	...............................................	TATCAAAAACAGATTTACTAAGGCTTAATG	
     41266	    47	 100.0	     0	...............................................	|                             	
==========	======	======	======	===============================================	==============================	==================
         8	    47	  98.4	    30	GTTGGGAATTGCTTTCAAAAATTATTATCTTCGTGATTAGTCACAGC	                              	       

# Left flank :   TATTGAACTGTTTAAAAAAGTTTATTGTTTTCGGGTACAAAAATAGAAAAACCTTATGGGTCATCTCTTATCATACATCAAGAAATGTAAATTTTGTTACCAATGTTAGGATTTGTAATATAAGAAGAAATAAATGAGGTATGGAAATAATATAGTTTATTATAGACTTCTTTTTGAATTTACACTTCTCATCACGAATTCTCATTTGATTTTCAAGATATTTTCAAAAATATTTTCACATTAAATATTTAATTTGAGAATAATTTACATATTTAATCTTTACCTATAAAAATAATACCATAAAAAAAATCACAAGGGAACATCTAAAATCTATTAAAGGAGGAATTGATTACTGCCCAGCTGGCTTTTGCATACTTGCAGATGCCCATATGTATCATAAATAAAGTCCCTCGGTTAGAGGGATTTTATATATATGGTCTTAAGATTTATTATCTTCATAATTAGTCACAGTTTCTATTTTTTTTCACATATATCATTAA
# Right flank :  CTCAAAAAAACAATCTACTGAAAATCAGCAGATTGTTTTTGTTTTTAGGATTTGAAATTTAGAATAATTCAAGCTGTTGAAAGGTTGGAGGAGGTTCTTCTTTATTTCTGGCAAAGAATATTTCAATATCTCCAAACTGTTTGTCAGTAATGCACATAATGGCAACTTTACCTGCTTTTGGAAGCATAAACTTAACTCTTTTAATGTGAACTTCAGCATTTTCACGACTCGGACAATGCCTTACGTACATTGAAAACTGAAATAATGTAAAACCATCATCAAGCAAAGATTTACGAAAGCGATTGGCATCTTTCATATTGGCCTTAGTCTCTGTTGGTAAATCATATAATACTAAAACCCACATAATTCGGTAAGCATTAAACCTTTCGGCATTCATATCAGTTCAGGATAAGAGATCAGACGCTTTTCTCCTGTATAACATTTATACAGTGATGTTGCTGTTGTTTTCACAGCAACCAATAATGGTCTCTTTTTATCAT

# Questionable array : NO	 Score: 6.18
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.92, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTGGGAATTGCTTTCAAAAATTATTATCTTCGTGATTAGTCACAGC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:65.96%AT]
# 	Reference repeat match prediction:         R [matched GTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATTAGTCACAGC with 98% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  F [-2.60,-0.50] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      F [0-7] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [75.0-80.0]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0.78,4.5   Confidence: HIGH] 

# Array family : II-C [Matched known repeat from this family],   
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