Array 1 4093-3883 **** Predicted by CRISPRDetect 2.4 *** >NZ_JNUV01000024.1 Corynebacterium glucuronolyticum DSM 44120 A3EADRAFT_scaffold_21.22_C, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 4092 28 100.0 33 ............................ TGGAGCAGCGCCTTGCAAAAATGCTCCGCCACC 4031 28 100.0 33 ............................ CTGACTCGCAAAGTCCTTGCCCAGGACATGGAT 3970 28 100.0 33 ............................ CCTTTGGTATAGGACATCAAGTCCAGACCAGCC 3909 27 82.1 0 G..........-...........G.G.G | ========== ====== ====== ====== ============================ ================================= ================== 4 28 95.5 33 CTGCCGCCCCTGTGCGGGCGGATAAACC # Left flank : ATGATCAAAGAGGATGCCCCAAGTCCATGCACGATGCCCCGAAGCGCATCGCCGGCGAGCAGTACTTCCACCGCATCGCCGGTGACACCACCGTTAATGTTGTGGACAATATTTTCGGCCTCCGCGCCGTCATCACCAAGGTCGACCGCGTCACCAACGAGCCGACCGGCATTGACTGACTCAAGTGCGAGGCCGACTGCCGCTTCCGCCTTACCATCGGCCTCCCCGCCACCGATGATGCCCGCCCCGACTCAATTGTCGACGGCTCCCTCTACATGGCGGACTCCACCGGCTCCTGGTACAAGCGATCGCGGTTCAGCGTAATGTAAGAGAAAATTTGTGGGGAGCTAGGCGCGATCTGATCTTAACCTCGAGTTTTTGCCTTCTTTCTTTTAAAACTGTCGGTCGGCGTTTTCCGGTGAATCCTTAGCGATGCTGGATCTGAAGCGAGGAACGTGGTAGAATTACGCACATAATTCAATATGGGCAAGTGAAGAAGT # Right flank : TTAGCTCGCAGAAGCACTTTCATCCTGGGGAGCATTCCCTCCCTGGTGGGGGGCTTCGGCCCTATAGCTTCATCGGAGCTGTAGGGTCTTTTTTGCGGTGGAATCTGCAGCATAAGGTCGACATGTGTCTTAACTGCCTTCTGAAGAAAGATCTTTTGGCCACGTTGTTGAGTAATCCACCCTAGGTATGGCGTTTTCCCACTGGGTATACCGCGTGCTCAGGGTCGTACCAGAGGATCCGGAAAAGGTCTCCAGAACGGAAGCCCCAAAGCCGACATTTGCCTTTGAGTCGGAACCTGAACACACGGTCCTCACTATCCGGGATTTTTTCTAGGCGTTTTTGTGCCTGGCGGCTGAGGTCAGCAATGTCGTGGTAGTGATTTCTCCGGTGTCCACCAGCAGTCTCTTGTTCGCACTCGCGCCATGTTTTCTTCTCCAAAGCCTCAAGGAACCGCAGGAGCTCGATGAGCTCATCTGCATTGAGGTTCCACCGACGCCCG # Questionable array : NO Score: 2.64 # Score Detail : 1:0, 2:0, 3:0, 4:0.78, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCCGCCCCTGTGCGGGCGGATAAACC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [4,4] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-8.10,-7.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [38.3-58.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.68 Confidence: LOW] # Array family : NA // Array 1 63523-62093 **** Predicted by CRISPRDetect 2.4 *** >NZ_MU251226.1 Corynebacterium glucuronolyticum DSM 44120 A3EADRAFT_scaffold_1.2, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================== ================== 63522 28 100.0 33 ............................ GCCTGGCTCGTGGGATAAAAATGATGGGTTTTA 63461 28 100.0 33 ............................ TGTCTTTCGCCTTCAACTACATCGACACTCGCA 63400 28 100.0 33 ............................ CCATCCCATCCGCCCCGCCGGGGCATTATTTTA 63339 28 100.0 33 ............................ GTCCGGAGTAGCCGGCGTCTCCGTCGACAGAAC 63278 28 100.0 34 ............................ CATCACAGGCTGGGGTCAGAGTAGAACCTATTTG 63216 28 100.0 33 ............................ CCTCGTCGTAGAGGCACAGGTCGAGCACGGAAC 63155 28 100.0 33 ............................ CCGCATGACCTGCCGGGTCTACGAGTTTTTGGT 63094 28 100.0 33 ............................ CCGGCTCCGCCGGCCCCCGTGGAGCCTCACGCA 63033 28 100.0 33 ............................ TGATCCTGAGTTGCGCTACACCCCATCAGGTTC 62972 28 100.0 33 ............................ TTCCATTAACACTAAAAGTGCATATAGTGTGTC 62911 28 100.0 33 ............................ GCGATCCGCCCATTTTTGGACTGGGTGGGGCAG 62850 28 100.0 33 ............................ CCCCAGGTGGCCACCATTCAGGCCGCTATCGAC 62789 28 100.0 33 ............................ CTTTTCCACATGAATATCCGGGTCCGTGCCGGC 62728 28 100.0 33 ............................ GAACTTTCCTAATCGCCGTGCGGGCGATAGCAA 62667 28 100.0 31 ............................ CCCGCCGCGCGCCTCTCTCTAGGCGTCCCTT 62608 28 100.0 33 ............................ CAAGGGCATCTTCGCGTCCCTGACAGGCGTGCA 62547 28 100.0 33 ............................ TTTCACCTGTTTCCTTTTCCTTCTCAGCGACCA 62486 28 100.0 33 ............................ CCAACGATCACGCCGCCTGAAACACACCAAAAC 62425 28 100.0 33 ............................ CTGCTAGTTTTCCTGGGGTTTCGCACACCTGCG 62364 28 100.0 33 ............................ CAAGCAGGTCAGAGCGTTAAAACGGCAAAACCC 62303 28 100.0 33 ............................ CCTCAGGTGCTGCTTGCTGCCCGGTTAACCAGT 62242 28 100.0 33 ............................ GCAACCATCCCGGCCACCCCATTCAACGCCTGC 62181 28 96.4 33 ........................T... TTTTATATGGCGTGGCGTAGTTTCTACCTCTTA 62120 28 85.7 0 .......................A.CTT | ========== ====== ====== ====== ============================ ================================== ================== 24 28 99.3 33 ATCTGCCCCGCACCTGCGGGGATGAGCC # Left flank : GACGATGGCGATCCTCTCAATGCCGAACTATTCCTTTGGAACGAAATCTCTGCCATCCCTGCGGGAATGAATTGGTCGGAGGAACATCGATGATGGTCCTCGTCGTCACCGCCTGCCCTGCCGGTCTTCGCGGTGACCTGACTAAATGGTTGTTCCAGATTTCCCCAACCGTTTTTGTTGGGCGACCCAGTGCTCGGATCCGGGAGGCAATCTGGAAACGCACGGTGGAACTGTGCAAAGACGGATCTGCCATTTTGGTCTGGAGCTCCGATAACGAACAAGGTTTAGAGTTTCGTACCCATCGGACCGAATGGCAACCCGCCGACTACGACGGCCTCACTCTCATACGCCGCCCCGCGCGACGGCCTCCCCCACAGCGGCGCACCGGCTGGAGCAAAGCCCGCAACATGTACCGCTCCCGCAAACGGTAGCCGAAACTAGCAAAAACAAAGCTAAAGCCAAAACCCAAAATCGGCGCTCATCTCCCCTGCTCAGATAGC # Right flank : GTAGTAAACTTCGCGCCACGGTGACCAATGAAGGCAGTCCAGCATTTTGTTTGCATTTGTGCCGATTCTGCCATCGGCTATCACTACTCCACTACTATGAGCGATATGACCACTCCTGATAGCGCAACTCCTGCCCGCCTTACGTACTCCGAAGATGCTCGCACAACGCTGGCCATAGCTGACGGTCGTGCGCACCTGCTCTCTGCGGATTCGCATCTCGGGGAGCTCCTCTATCTGTCCCCCGAGGCCGATTTTTCTGAGGGGGGCTCGATTCGCGGCGGGGTGCCGATCATCGCGCCGTGGTTCAATGATCTGACAGGCCAGGATCCTGCGCATGGGTGGGCGCGTCGGAAAGCGTGGGAGTGCCAGGAGGTGCCGGGAGGATTCGATTGCCGGATTCGGCACGACGAGTGGGATCTGAGGCTCGGCATTCAGACCACGCCCAAGGGCTTTGCGATAATCTTGAAGTGCAGGAATGCAGCTTCGCGCCGTCGCGATGT # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATCTGCCCCGCACCTGCGGGGATGAGCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [4,4] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCTGCCCCGCGCGAGCGGGGATGAGCC with 89% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [53.3-51.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 74411-70467 **** Predicted by CRISPRDetect 2.4 *** >NZ_MU251226.1 Corynebacterium glucuronolyticum DSM 44120 A3EADRAFT_scaffold_1.2, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ =========================================== ================== 74410 28 100.0 33 ............................ CCGTGCGATGGTACCACCCCAAGATCCACCTAG 74349 28 100.0 33 ............................ TCCACTGGAACTCCCCATCCTCCGACGGTTCCG 74288 28 100.0 33 ............................ CGTAGTAACTACGTTGTAATATTACTCATGTAA 74227 28 100.0 33 ............................ CCGTGCGATGGTACCACCCCAAGATCCACCTAG 74166 28 100.0 33 ............................ CCGGCAGGACCCCATGACTGAGCGCCCCGATGT 74105 28 100.0 34 ............................ GATGTCGCCCTCGTTGAGAACGTCGACGGCCTTA 74043 28 100.0 33 ............................ CACGCGTCACGCAACGCGTCCAACTCCGCGTCG 73982 28 100.0 33 ............................ CAGCCCGACCCACCGGCCACATTCCGTCACAGT 73921 28 100.0 33 ............................ CCGAACGATCACGAAACGATGTATGACTTCCTC 73860 28 100.0 33 ............................ CGGCGCGGCGTCACCGGTGGACTTGTCGCGGTC 73799 28 100.0 33 ............................ CTATACCAGTGTGCTCTTGGAAGCGGCGACAGA 73738 28 100.0 33 ............................ GGACCCGCCGAATGATCCACCTCGTTGTCGGCC 73677 28 100.0 33 ............................ CCTGCAGCCCCTCCCGCGTGCGTGCGGAGATAA 73616 28 100.0 33 ............................ CCGCCTTGCAGATGTCTGCTTTGTATGGGGAGG 73555 28 100.0 33 ............................ CCCCGGCTCGTGGTGTGGGAAAACGTGAGAGGA 73494 28 100.0 33 ............................ CCTGGTTCGACCAGCCTGGCGACAACTGCTGGA 73433 28 100.0 33 ............................ CATCGGCCACAGTCCCAACACGAAGCCCCGCAA 73372 28 100.0 33 ............................ CACAACCGCCAGCACACCGCCGAAAATGTTCAC 73311 28 100.0 43 ............................ CGCCTCGGCAAGCTCCCGCTGCGTGTACTTCCCCGTCTGCCAA 73240 28 100.0 33 ............................ GTGTGTGTGCTCTCGCACGTAGTTCGGGTCGAG 73179 28 100.0 33 ............................ CTCTACGTCGCTTTGTGCAGCCTGTAGCTTCTC 73118 28 100.0 33 ............................ TTCCTGCCCATGTTCCAGGCATGAATTGTGCCC 73057 28 100.0 33 ............................ CTCCCGCACCCGGTCAAAACGCCGGCCACCGCT 72996 28 100.0 33 ............................ CGCGGCAACGCCTGTCATTGTCGTACCGAGCGC 72935 28 100.0 33 ............................ CGTCTCGTCCTTCGCCCTACAGCGCGCCACAGC 72874 28 100.0 33 ............................ GTCGCCGACGCGACCCACCCACCGAGTTTTGAA 72813 28 100.0 33 ............................ GAGATATGGGGGCTAATCAGATGAAAGAAGAGA 72752 28 100.0 33 ............................ CACGAGCAATTGCTTCATCCGCCCTGCCTGAGA 72691 28 100.0 33 ............................ CTGGTGCAGGCTGAGAAGCTGCTGGACGAGTCG 72630 28 100.0 33 ............................ TCCCGGACACGCGGCTCAATGAAAAAACGGTGC 72569 28 100.0 33 ............................ GGCTATGTGGAGCAGGCTGAGGCTGCTGTGGCT 72508 28 100.0 33 ............................ CCTTCCACCACCGGGCAGTAGCCCACCAAACCG 72447 28 100.0 33 ............................ CAAACCGCGATTTAGGAGTCGGTGTGATCGCGC 72386 28 100.0 33 ............................ CTTACCAGATAAATTCGCAATCTGGCAGCTATC 72325 28 100.0 33 ............................ CGCGGGCTACTCCAATTTTGAGGCGGTAGTGGA 72264 28 100.0 33 ............................ CTCTCCGCACACACGAAAGGGAAAACCATTATG 72203 28 100.0 33 ............................ GTCCCACTTTTGCCCTTCGGGGCATCGGGGTCG 72142 28 100.0 33 ............................ CCGCATCAACATGTATTTCGAGTACAACCGCCC 72081 28 100.0 33 ............................ GGAACCGTGACCCGCGCAGGAGCCGCATCAGGT 72020 28 96.4 33 .........C.................. CAGGTGGGACGAGATTGACTCGATCGTCGCGCA 71959 28 100.0 34 ............................ CAGGATGATTCTCGGCTGGAAAAGGTGGCGTGGG 71897 28 100.0 33 ............................ CTTCCTTTCGAGAATGCCGCGTTTATCGAATTC 71836 28 100.0 33 ............................ CGTCGGGCACGAGACACAAAAGTAGCAAGCGAC 71775 28 100.0 33 ............................ GATAGCGATAGCCCTCGCCCGCGTGGACTGATC 71714 28 100.0 33 ............................ GACAATGAGGTACAGGTCCTCCCAGCTTGACCA 71653 28 100.0 33 ............................ CAAAATCGGGCCTTTTCAGCCAAGGCCAACAAA 71592 28 100.0 33 ............................ GACAATGAGGTACAGGTCCTCCCAGCTTGACCA 71531 28 100.0 33 ............................ CAGCGAGCCAACTTTTCATGCGGCAAGCGAGCG 71470 28 96.4 33 .................T.......... TTCGTGGCTTTTTAGGGCTCGGCGGTGATAAGG 71409 28 100.0 33 ............................ TCTTGCCCCCACAATGCGCGCACGTATCCGGGG 71348 28 100.0 33 ............................ CGCCGGGATTTCCGCCGGCGTGTTCAAAGTCCC 71287 28 100.0 33 ............................ GAAAAGGGGTACGGCTATGGCCGACACGAAACA 71226 28 100.0 33 ............................ GTGCATATTCAGCATGACACACGTTGTGTACCC 71165 28 100.0 33 ............................ CCGTAGTTTTGTGGTTACGTGGTGCTCCCTGGT 71104 28 100.0 33 ............................ CTTTTGTTGCAGCCATTTAACGGATTGGTGTAT 71043 28 100.0 33 ............................ CGCCCGCGTAGGCCCTGACGCGCTATAGACTGA 70982 28 100.0 33 ............................ CAGCAAGGCGCACGCAAGGGCGGCGGCAAGCAG 70921 28 100.0 33 ............................ GACCAGACCTTCGATGATGTGGCGCGCCTGCTG 70860 28 100.0 33 ............................ GTTCTGACCGGCTGCGTTTTGGCCAAGCTGCTT 70799 28 100.0 33 ............................ GCCGTGACCACCCCGTACCAATCCGGGGTGCCC 70738 28 100.0 33 ............................ GACCAGACCTTCGATGATGTGGCGCGCCTGCTG 70677 28 100.0 33 ............................ GTTCTGACCGGCTGCGTTTTGGCCAAGCTGCTT 70616 28 100.0 33 ............................ GTTCTGACCGGCTGCGTTTTGGCCAAGCTGCTT 70555 28 100.0 33 ............................ GCACTCAAACTCGCCACCGGCGTAAACATCCAA 70494 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ =========================================== ================== 65 28 99.9 33 ATCTGCCCCGCACCTGCGGGGATGAGCC # Left flank : CGTCCTCGTCACCACACCACTGCCCTACAACGAGTTCTGCGCCCTCATGAACCGCGCCAAACTCGTCGTCACCGACTCCGGCGGCGTGCAGGAGGAGGCCCCAGCACTGGGCAAACCAGTCCTCGTCATGCGCGACACGACCGAGCGCCCCGAGGCCGTCAGCTACGGCACCGTCAAGCTCGTCGGCACCAACGAAGACGACATCGTCAACGAGGCGACGACGCTGCTCACCGATGACACCGCCTACGCCGCCATGGCCAATGCCGTCAACCCCTACGGCGATGGCGACGCCGTCCCCCGCGTCCTCGCCGCCATGGCGCAGCTCGCCGGCGTGGGAGAGAGGTTGGAGGATTTTCGGCCGTAGGGGTGGGCCACCGGGTGGGGCGGTGCCCCAGCTCCGACCCCTCCCACGCTCAAGCCGACTCCGGCCTCCTCTTGCCCCCGATTTCAAGTTAAAGGTAAAATAGCCCCAGGCTCCATATCCTGCCTGTTCAGGAAGC # Right flank : CGCTACAGGGTGGGTGTGCACCATCCCTTTCTCATCTGCCCCGCACCTGCGGGGATGAGCCNATCTGCCCCGCACCTGCGGGGATGAGCCCGCTACAGGGTGGGTGTGCACCATCCCTTTCTCATCTGCCCCGCACCTGCGGGGATGAGCCCCGCGAAACCGGCAACATCGTTGCCCAGGTGGCATCTACCCCGCACCTGCGGGGATGAGCCCAGTTTCACCGTCGGTGGCCTGCTGTACAGCGCATCTGCCCCGCACCTGCGGGGATGAGCCCAGGAATTGGTGCCGTGGATGCGGGTGGCAGGGATCTGCCCCGCACCTGCGGGGATGAGCCCGTTCGTAGGGGCCTTGGCCTTTAATTTACGAAATCTGCCCCGCAACTGCGGGGATGAGCCACCATCACCCGCATCTTCCCCTCTGTGCTCCTTATCTGCCCCGCACCTGCGGGGATGAGCCCGGCGAGAGCACCCGACCATCGGCCAGGTGCTCATTTGCCCCGC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATCTGCCCCGCACCTGCGGGGATGAGCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [4,4] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCTGCCCCGCGCGAGCGGGGATGAGCC with 89% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [35.0-51.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //