Array 1 552-31 **** Predicted by CRISPRDetect 2.4 *** >NZ_BONQ01000129.1 Dactylosporangium siamense strain NBRC 106093 sequence129, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 551 29 72.4 32 ACCA........TGC.............A TAGAAGTCCGTCGCGTTGAAGTACCACAGGAT 490 29 100.0 32 ............................. GTCCCGGCCAGCGACGCCCGCGGCATGTAGGC 429 29 100.0 32 ............................. GCCCTGATGTACCCGACGACCCTGGACGAGTA 368 29 96.6 32 ........................A.... CGGGTAGACGGGTGTCTCACGTGCGAGCGCGC 307 29 100.0 32 ............................. GCGACAGCAGCGTCGTTGGCCGCCAGTAGCCG 246 29 100.0 32 ............................. AGGTCAGCCGTGCGGGCAGTGCAGCGGGTGCC 185 29 96.6 32 ............................T TAGCTGGGATTGGGCCTAACTGAATAGGACGT TGGG [161] 120 29 96.6 32 ...............A............. ACGCTGTTGCCGCCGGTGCCGCCCTGCGAGTA 59 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 9 29 95.8 32 GTGCTCCCCGCGCATGCGGGGGTGGTCCC # Left flank : CAACCCATTTGTCGATGCACAGCAAGTCTCGGTGTGGACATCAATGTCTTGGCATGGATCAGTCGTCCAGCGACGACATCGACGAGGCGAGACCATCCCCGCGCGCGTGGGGAGCACGGCGACGTCGCACCCACCATGAACTGCCACGCGGGACCATCCCCGCGTGCGCGGGCAGCACGGCACCCGCCGCCACCTGGGGCCGGAAGAGATCGGACCATCCCGCGTACGCGGGGAGCTCCCCCACCTCCAGGGACGGGACATCCCCGCGTGCGCGGGGAGCGCTGGACGTGCCCGCCACTGGTCGGCGTGCCCGCCGGACCATCCCCGCGTGCGCGGGGAGCACTTGGTCTTGGCGATCGCGTGGGTCAGCTGGTTGGGACCATCCGCGCGTGCGCGGGGAGCACGTGTGGCGGATCACCGGGACGGTCGCTGTCGGGGGACCATCCCCGCGTGCGCGGGGAGCACGGCCCGGAGCGCTTTCAGGTCGTTGTGGATGGTGG # Right flank : CCCCGGAGACGTGGTCACGGTCTACGTGCTC # Questionable array : NO Score: 6.05 # Score Detail : 1:0, 2:3, 3:0, 4:0.79, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCCCCGCGCATGCGGGGGTGGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,1] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGCTCCCCGCGCATGCGGGGGTGGTCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.30,-13.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [5-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [16.7-28.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.78,5.14 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 1-946 **** Predicted by CRISPRDetect 2.4 *** >NZ_BONQ01000205.1 Dactylosporangium siamense strain NBRC 106093 sequence205, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 1 29 100.0 32 ............................. ACGCGGTCGCCCGCATCGAGCAGTGCGTCAAC G [18] 63 29 93.1 33 ..............G.............C CCCGATGAGGCCGGCGACGCGCAGCTTCTCGAC 125 29 93.1 31 .....T......................C CCGCCGGGGGAACCTCGTGCATCGCAATGGC 185 29 100.0 32 ............................. CACTCCTACACCCGCAAGGTCGCGGACCGCAT 246 29 93.1 32 .C..........................C TTGCCCACCGACGCGATCGGGGTCGTGACGTC 307 29 96.6 32 ............................C GTAGCGCAACCTGCGCTCCTGAACCGTAGGCG 368 29 93.1 32 ...........A................C CACACCACGCACACGAGCTCCGACCGCGGGCA 429 28 93.1 33 ..T..............-........... ATGACCGGCTACTCCGGCTTCGTCTCGCAGGGC 490 29 96.6 32 ............................C CAGCGAGCCGTGTACGACCTGCGGCCGCTGTT 551 29 100.0 32 ............................. ACGACGGTCCATGTGACGGTGGCGACGTTGCT 612 29 89.7 32 .........A......T...........C GCAACGCGCAGGAAGCCCTGCGAGCCAGCCTC 673 29 100.0 33 ............................. GCGGGGTTGCCCAGTTCGAGCCCCGGGGACAGC 735 29 93.1 32 .........A.A................. GTCCGGCGCTGGCGGACGACCCGCGAAGTCGA 796 28 89.7 33 .................T.......-..C TCAGGTCCGTTCGGGTCGCATCGCCGCGAGGAC 857 29 93.1 32 C...C........................ GAGGAACCATCATCATGTCAACCGGTCCCGCC 918 29 72.4 0 ..................T...CCCCATT | ========== ====== ====== ====== ============================= ================================= ================== 16 29 93.5 32 GTGCTCCCCGCGCATGCGGGGGTGGTCCG # Left flank : | # Right flank : TCTCGGTGACCGGTTGGCGGCCGCGGCGTCACGCACGACGTTGCTGCAGCTGATCGGTACGCTGCCAGTGCCGGAACCTGGGCGAGTGGTGACGGTCGGGGTGGACGACTTCGCGTTCCGCGAGGGCCGCCATTACGGCTCGATCGTGGTGGACATGGACACACCGGCCGTCTGGTGGATCTCTTGCCCGACCGGCGGGCCGCCAGCTTCACCGCCTGGCTGCGGGCCCAGCCTGGCGCTGAGGTCATCTGCCGGGACTGGGCCGGCGGCTATGCCGAGGGCGCCCGGCTCGGCGCCCCGACCGCGATCCAGGTCGCCGACCGGTTCCACCTGCCCTACAACCCCACCCGGGCGGTTGACCGGGTGGTCCGCGCACACCGAAAGTCCTTACGCGAACGACCTGAGCATGCAGACGTTGCCCAACCCGCACCGCAGTCCGCGTCTGACTACGACCGCCGAGCGCAGCTGACCCGGCAACGCCATGCCGAGATCCACGCACT # Questionable array : NO Score: 5.31 # Score Detail : 1:0, 2:3, 3:0, 4:0.68, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.37, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCCCCGCGCATGCGGGGGTGGTCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [1,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGCTCCCCGCGCATGCGGGGGTGGTCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.00,-12.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [4-15] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [0.0-0.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //