Array 1 34438-34110 **** Predicted by CRISPRDetect 2.4 *** >NZ_QMCQ01000053.1 Enterobacter hormaechei strain 153C2 153C2_S87_R1__paired__contig_53, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 34437 28 100.0 32 ............................ GGTCGGGAGGTTATTTTGTGTTATTGATACTG 34377 28 100.0 32 ............................ AGTTTGCATAGGAAGATGTGTAATATTGTCAT 34317 28 100.0 32 ............................ GTCTGCGGCTACACGATATGCCGCTGGGTGAT 34257 28 100.0 32 ............................ GTGTTAACGGCCAGCACGGTGCTACGCTTCGT 34197 28 100.0 32 ............................ TCTGTGGCTTGCTGCCGTTTATTCCAATGCCT 34137 28 92.9 0 ..........C...........A..... | ========== ====== ====== ====== ============================ ================================ ================== 6 28 98.8 32 GTGCACTGCCGTACAGGCAGCTTAGAAA # Left flank : C # Right flank : AATCGTTCAAATAATCGACCGTCCTGACAAAAAAATAAGGCCGGGAATATCCCGGCCTTATTTAATATTCATCTGCCATTACAGGCGAAAACAATTAGCGACTACGGAAGACAATGCGGCCTTTGCTCAGGTCGTACGGGGTCAGTTCAACAGTCACTTTGTCGCCCGTCAAAATGCGGATATAGTTTTTGCGCATTTTACCGGAGATGTGCGCAGTTACCACGTGACCGTTTTCCAGTTCTACGCGAAACATGGTATTAGGCAACGTATCAAGTACGGTACCCTGCATTTCAATATTGTCTTCTTTGGCCATCTAATCCTCTGGGGTATCACTACCAAGTTTTGAACCGGCAAGATAATGCCGAAATTCATCAATTAAGTAAAGAATTGCGCGTTTAAAACGCAGCAAAACAATTTCAGCGTATTGCCCAAGCGTCACGGTACAACCGAACGGAAAGCGCATTCGTAAAGGGGAGACGACAGGATAAACGTCAGGACGT # Questionable array : NO Score: 6.20 # Score Detail : 1:0, 2:3, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [56.7-0.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,5.65 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 652-384 **** Predicted by CRISPRDetect 2.4 *** >NZ_QMCQ01000022.1 Enterobacter hormaechei strain 153C2 153C2_S87_R1__paired__contig_22, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 651 28 92.9 32 ..G........T................ GATATAATCAACTTCTTTTCCTGACTCATTAC 591 28 96.4 32 ...........T................ ATTTGATAAAGCGCGTTAAATTTAGCCTGTTC 531 28 100.0 32 ............................ GCCTCGCTCGTTCCCGTGAATGGGCTGTCCGT 471 28 100.0 32 ............................ TTTTTCATCCCACACAGAATTCATTTCCAGAG 411 28 71.4 0 ....................NNNNNNNN | ========== ====== ====== ====== ============================ ================================ ================== 5 28 92.1 32 GTTCACTGCCGCACAGGCAGCTTAGAAA # Left flank : GCGTGCCACACGCTCGCTCTCGTCTGGCGTCAGCGTCCGGCCTGCGCTTTTGCGGCGGGCAACGTTACGCTCGTTGATTCCCGTGACGCGTAAAATCTCCGCTTTCGACATGTCCGTCCACTCGTGAATATTGTCGAGGACACTGACGGGTAATCCTTGATTGAGATACTCAATCAGCCGCATACCTCTGTTTGCCGGTAAACCAGCGTAGCGCCACAGCGTGTTATCAGCAGGCTTTTGCGCGGGGACCCATGTTCTCATGATACCTCCCGAGTAATGTCATTTGTCATATATAAGTATAGTCATTTGTCAGGCGTCAGGGAATGGGTATTTTTTGTGCTGAGTGGGTTATGAAAGAATGGGCTTTTTACCCTAATTTTTGATAAGAATTTAATGTATTGATTTTAATATGCATTTTTAATTGGCGAGAAAAAAGGGTTAGAGGAGGGCGTTTAGCTTTTTTTGTATGAAAATCATGATGGTGTGGAGCTATTATTCCA # Right flank : NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCGCACAGGCAGCTTAGAAAGGCTAAAAAGGCGCCGCCGGTCACGGTTTCACGTTCACTGCCGCACAGGCAGCTTAGAAAACGAAAGGGAAAGCAATGCATTCACTTGCGTAGTTCACTGCCGTACAGGCAGCTTAGAAAAGCGCACATCTGCAACCCAACCAGCAGATCCTGTTCACTGCCGCACAGGCAGCTTAGAAATTATTAATAACACACAGAATTAATTTCAAGAGGTTCACTGCCGCACAGGCAGCTTAGAAATGCTAAAAAGGCGCCGCCCGTCAACGAATCAAGTTAAAAACATCACAGGCAGCTTAGAAAA # Questionable array : NO Score: 5.66 # Score Detail : 1:0, 2:3, 3:0, 4:0.60, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGCACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [8-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [0.0-61.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 11101-10953 **** Predicted by CRISPRDetect 2.4 *** >NZ_QMCQ01000022.1 Enterobacter hormaechei strain 153C2 153C2_S87_R1__paired__contig_22, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 11100 28 60.7 32 NNNNNNNNNNN................. TTCGCGCTTGAACACGCGAACCTCTTGCGGCA 11040 28 100.0 32 ............................ GTCAATCATGGGGGCGGCAATGCGACCACAGC 10980 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================ ================== 3 28 86.9 32 GTTCACTGCCGTACAGGCAGCTTAGAAA # Left flank : CAATAAGATGGCGTGGTTTTCTTTCAGTTCACTGCCGTACAGGCAGCTTAGAAAATACTCCACCATCTATGCAGTCAACGGCGCAAGTTCACTGCCGTACAGGCAGCTTAGAAATGCGCATTGAGACGGCCTGACGCCAGGGCGCGGTTCACTGCCGTACAGGCAGCTTAGAAAAGAATTTCCTAACCCATCAGCTACATTAAATCGTTCACTGCCGTACAGGCAGCTTAGAAAAGCCGCTGGCGATAGCATCAGAGGCGTTTTCATGTTCACTGCCGTACAGGCAGCTTAGAAAGCTTCGTCGTCGCGGTAAACGTCACGATTATTGTTCACTGCCGTACAGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN # Right flank : ATGGTGAATGTGTACCAGATGACCGGATTGGTGTTCACTGCCGTACAGGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTTCACTGCCGTACAGGCAGCTTAGAAATGCATATTCGCAATAGCGCTGGCCGCAGAAACGTTCACTGCCGTACAGGCAGCTTAGAAAGTTTAAGCTCACCGCTTGCTTTGAGAAAAGCTGTTCACTGCCGTACAGACAGCTTAGAAAAGGTAACTTTTCCTTTCGTCCGTTCAGCGCGTGTTCACTGCCGTACAGGCAGCTTAGAAAAGTAGGGAAGCAGCACGGTAATCCGATAGGTGGTTCACTGCCGTACAGGCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN # Questionable array : NO Score: 5.02 # Score Detail : 1:0, 2:3, 3:0, 4:0.35, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-11] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [40.0-0.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.68,5.24 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 3 11575-11306 **** Predicted by CRISPRDetect 2.4 *** >NZ_QMCQ01000022.1 Enterobacter hormaechei strain 153C2 153C2_S87_R1__paired__contig_22, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 11574 28 100.0 32 ............................ ATACTCCACCATCTATGCAGTCAACGGCGCAA 11514 28 100.0 32 ............................ TGCGCATTGAGACGGCCTGACGCCAGGGCGCG 11454 28 100.0 32 ............................ AGAATTTCCTAACCCATCAGCTACATTAAATC 11394 28 100.0 33 ............................ AGCCGCTGGCGATAGCATCAGAGGCGTTTTCAT 11333 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 5 28 100.0 32 GTTCACTGCCGTACAGGCAGCTTAGAAA # Left flank : CTCCCACAAACGCAGGCTGTTTGCCGCTGTCTCGGAGCTTATCTGGAAGAGGTAAAATCCGGCCTCACAGAATCCATGCGTGATTTTCAGGTGGTGGAACTTGAGGACGAAGCGGAACAACCGCGACAAAAAGAGTGGCTACTGGAAGATACCGAAACGAAGTGCGACTACTGCCGGGCGTTAAACCACGTGCTGCTGGTGTCGCATTTTGACCGCGATATGTTGCCGCACCTGACGGGACTGCTGCATGACATTACTCATTCTATGGCCGCTGATGTCGTTGCACCTCCACGTGCAGAATCGGTAATTCACATTATTTCCTGAGTTGAATCCGAGGCGTCGGGGGCAGACCTCTAACGCCGCTGGCTTGACCCTTTTTTTTGATGTTTACGTAACGTATTGATTTATATGATGCGAACTTACGTGCCAGAAAAAAGGGTTTTATGCGCGAAAGTTGATTATTTTGTTTTCTAACAATAAGATGGCGTGGTTTTCTTTCA # Right flank : GCTTCGTCGTCGCGGTAAACGTCACGATTATTGTTCACTGCCGTACAGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTACAGGCAGCTTAGAAATTCGCGCTTGAACACGCGAACCTCTTGCGGCAGTTCACTGCCGTACAGGCAGCTTAGAAAGTCAATCATGGGGGCGGCAATGCGACCACAGCGTTCACTGCCGTACAGGCAGCTTAGAAAATGGTGAATGTGTACCAGATGACCGGATTGGTGTTCACTGCCGTACAGGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTTCACTGCCGTACAGG # Questionable array : NO Score: 6.06 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [38.3-68.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.51 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //