Array 1 35477-34411 **** Predicted by CRISPRDetect 2.4 *** >NZ_AZGF01000008.1 Paucilactobacillus suebicus DSM 5007 = KCTC 3549 strain DSM 5007 Scaffold8, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ====================================================================================================================================================================================================== ================== 35476 32 100.0 36 ................................ TGAAACAGGTAGTATGCGTAGATTACGAAATGAAAC 35408 32 100.0 34 ................................ ATCATCTGTAAGGCCAGCTAGTTATGGTGGTACT 35342 32 100.0 34 ................................ ATGATCGAACAAAACGCTCTTTCACCGATCTTAA 35276 32 100.0 34 ................................ ACAACAGGATAAATATAAAAAATGTTGTTCTTTA 35210 32 100.0 37 ................................ TTAATCACGGGTACTAGTGCCGACGCCATACGATCGT 35141 32 100.0 35 ................................ AACGCTACCATGTTGATGAATTTGAATTAGATGAA 35074 32 100.0 35 ................................ AAAACGAATTTCCAGAAGAAATGGCAAAACGTACC 35007 32 100.0 34 ................................ CATCTTGCCAGCCTTTTGTAGTGCTTTAATCAGA 34941 32 100.0 34 ................................ GGAACTGCCCAAATGAATTAAGTGAAGTCATGCC 34875 32 100.0 35 ................................ ATGTTTGGTGATGATTTGGCTAATGGGTCGAGTAA 34808 32 100.0 36 ................................ AAGGAAAAGCTAGAAGAGGCCACTAGGGCTAAGCAC 34740 32 100.0 36 ................................ CAAGAGGCATTTAGGCTTAAAAATGGTTTAGTTGGT 34672 32 75.0 198 ...A........A.........T..GATCT.. TATCTGAAAAAATAATGCCTGTAATTACCATTTTTTATCAATTGTAGTTTTTGCCGTCACCTTGAAACGATATATAAATTATCTCTACTAATGTGTAGACACGTTTTTATACTACAAGACAAGTAGAATAAATCTCGCTATCGTCTGTTTACTACGCAAAACGAAAATCTATTTTTATAAAATGTTATAATGATTGAA 34442 32 81.2 0 ......T....TTAA.A............... | ========== ====== ====== ====== ================================ ====================================================================================================================================================================================================== ================== 14 32 96.9 48 GTCGCACTCTTCGTGAGTGCGTGAATTGAAAT # Left flank : TGTGTATAAGTTTAGTGGTAGTATTAGGCCAAATTTAGCTGAAAAAACTCAATTTAGTTTGGAGGATTCGGAGCTTTTGAAACAGGCGTTATTACATATGTTTGACAATGACGCATCAGCTTCAAGACCTGCAGGATCTATGCAGTTATTAAAAGTAGTATGGTCTGTGCACGATAATAAATTAGGCCAGTATCCGCAGTGGAAAGTAGAACAACAGGTTTCTGTTGAATATAATGATACGGCTTCTGATTTTGAAAATGTTAAAATTAAGTTTAACGCATTACCAAATCTTAAAAATGAAGAATTTTAAAAAGTTTAGTAGCAATAATTTTCATCAGTGCGAAAGTGTTGTGCACATGAAATTGCACGTTAATTCGCACTTGATGGAATTAACATATTACTGCATATAGTATTATTGTATTAGCTTTCTTTACACGAATTATGTATATTTTGAATCTTAAAAACGGATTATATTACCTGAATTTGGGTATTTATCCGCA # Right flank : TATAAGATCAAGGGTCCTATTTGAGCCTTTTACTCACATACTTATTTTATGAAAGCATGTGAGAATACATACTTTTCAAAAATGAATTGTTGGCAGTGTAACATAACGTATGCTTAACGGGGTGACTAGATTTGGAATATTTGGCACATAAGAATGATGATGGAAGTATACAAACACTTAGAGAACATTTACAACAGACAGCTAACTTGGCTTATAAACTAGCACCTGGCAATCTTAAAAATATCGCCTATTTGCTAGGACTGCTACATGATATTGGTAAGTATCAACCAGAATTTCAGTCTCACATTCAAAAACAGGATCATAACAAAGTTGACCACTCTTCTATGGCAAATGCGATTTTAATAAATTACTTTGAACAGGTAAATGATGATATGTCACGACTATGCATTGAAGCATTTGGTGGTATCATTATGGCTCATCATGTGGGATATTTACCAAACTTTGGTAACGAATTGCTTCAAGAAACAGATTATGAAAAA # Questionable array : NO Score: 7.86 # Score Detail : 1:0, 2:3, 3:3, 4:0.85, 5:0, 6:0.25, 7:-1.24, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCTTCGTGAGTGCGTGAATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.12%AT] # Reference repeat match prediction: R [matched GTCGCACTCTTCGTGAGTGCGTGGGTTGAAAT with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-2.60,-3.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [14-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [68.3-73.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,9.78 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //