Array 1 246163-246610 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP021152.1 Photobacterium damselae subsp. damselae strain KC-Na-1 chromosome II, complete sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 246163 28 100.0 32 ............................ ATAATAGATTCATTGTTAAGAGAAAAATCTAA 246223 28 100.0 32 ............................ TAGTGCTAACTGCATCCCCTCACGCAAACCGA 246283 28 100.0 32 ............................ TTGTTTGCTGCTGCGTTTTTTCATAAGCGTCC 246343 28 100.0 32 ............................ TAATCCACAAAATACGGGGCAAAATACTTTTG 246403 28 100.0 32 ............................ GCTCCAGCTCCATTCAAACTCGTAGGATGGAA 246463 28 100.0 32 ............................ ACTCAGCATTGCTGGGCGGTTTGTGCCTCGGT 246523 28 100.0 32 ............................ TGTGACATCTCTAAGTTGATAAAAAGTGACAT 246583 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================ ================== 8 28 100.0 32 CTTCACTGCCGAGTAGGCAGCTTAGAAA # Left flank : GTGTAGATCTAAAAGTCTCAAAATGTCATCTAATAATCTTTATTTTGATTCTTTTTGTGATTACTTTAAGCTGGATTCAAAAGGGAACAAAAAGTAGACGGTTAAGTTCAAGGAGTGATCATGTCTTCAATACCAACAACAAAAGAGGAATTGGAAAAAGCAATTAATGATTCTTTTTCTAAATTACTCATATACTTAAAAGCAATACCTGAATCTGAATCGCGGACACATTCTCGTCATTATCTAATCATCAACTCTATCAAGAACCATGGTACGAAAAATGGACGTTAGGGCGAATGATTCAGTTTAATACCTCATCGCCAATGAAAAATGTAAGAACTAAGGTACGAAGATTTAAAAGAGGGATGTGACCCTATTTTTTGACTTATTTATAAGTTATTGATTTATAAATATGTAAAATAGGACGCAGAAAAAAGGGTATTTTAGAATAAAGTGGTCTAAGTTCTTTAAAAATAAACCGAAATCGAATAAAGTCTTCA # Right flank : ATAAGGTAGATATTTGTACGTTTTATATGCCATCTGTCAACGATCATTAAAATTTGATCCACTTTTTAACTGATTCCGATCAACCAAAAGTGATCCACATAATTACTCAGGTAATGTTCCTGAGCGACGTTTGTCTTTCAGGCGATAACTATCACCACTTAACTGAAGCACATGACTATGGTGAAGTAATCTATCTAACATTGCTGCTGTTAATGTCGCATCATCGGCAAAGGCCGTCGGCCATTGCCCGAATGATAAATTACTCGTTAATATAATACTTCCGTGTTCATACCGTTTAGCTATAACATTAAAAAACAGATTGGCTTCTTCTCGTCCAAAAGGCAAATATCCGATCTCATCAATAATTAATAATTTCGGTGCCATGATGGAGCGTGAAAGATATTGTTTTAATTTATTTTGACGTTTAGCTGTCGATAACTGCAACATCAAATCTGCGGCAGTGATAAAACGTGTTTTTTTCTTTGCTTGCACGGCTTTTA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTCACTGCCGAGTAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched CTTCACTGCCGAGTAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [75.0-70.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.24,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 257070-257278 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP021152.1 Photobacterium damselae subsp. damselae strain KC-Na-1 chromosome II, complete sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 257070 28 100.0 32 ............................ TAAGTACAGGTTTCCAGGATTTGACGGTAATG 257130 28 100.0 32 ............................ TCTACATCTGCGCACTCTGATGTTCCTTTCTC 257190 28 100.0 32 ............................ TATAAAGCATTTAAAACACAGCCGCCAAGTGC 257250 28 89.3 0 .....................C..CT.. | A [257272] ========== ====== ====== ====== ============================ ================================ ================== 4 28 97.3 32 CTTCACTGCCGAGTAGGCAGCTTAGAAA # Left flank : GATGAACTAATGGCTTTACCTTGGTTGAAAGGTTTGCGTGATTACACCAAAGTTAGTGCAATCTTACCAATACCTCGTGATATTGCAGGGCATCGCACTGTGCATCGCGTACAAAAAAAGAGTCCTCATAATTTGCGTAAGCGTGCGGTAGCAAAAGGCCGAATGACTGAACAAGAGGCTCTGACGAAAATCCCTGATGCGTTACAAGAAAGATTAGCTTTACCTTTTATCCAGATGCAGAGTTTGTCGAATAAGCAGGTAATGCGTATTTATGTTGCGCTAGGAGAGATTCAATCAGAACCTGTTTTGGGTGAGTTTTCTAGCTATGGTATGAGCCGCACGTCGACCATTCCTTGGTTTTAATCTGTAGACCCTTTTTTTAAGCTTATACTTAACTTATTGATTTATAAGTCATATTGTAATAGGTGAGAAAAAAGGGTTTTTTATTGAAAAATGACTTAAGCTCTTTAAAAATAAACCGAAATCGAATAAAGTCTTCA # Right flank : AGTAAACTTTGGAGCTAACCTTTGCTTTTGGTATCCTTGGTGCTTATCGCTAAGATCATTAGCAAAAGTATAAACATAGGTACTACATGCTCACAATCTCAAACAATGTGACGATTTCCGATTGGGAGATTGAACTTAACGCTATTCGCTCTGCGGGAAATGGTGGGCAAAACGTCAATAAAGTAGCCACAGCAATTCATCTTAGATTTGATATTAAGAAATCATCACTGCCAGCTATTTATAAAGAAAAATTACTTAAGCTATCAGACAGTCGAATTTCTTCTGATGGTGTGATCATCATTAAATCGCAGCAATATCGAACCCAACTGCAAAATAAAGAAGCTGCTCTTGAGCGATTAAAAGAATTGATTTTATCTGCGATGGTTGTACAAAAAGCCCGTCGTCCAACTAAGCCAACTAAAAGCTCCCAACGTCGTCGTTTAGAGTCAAAAACCAAAAGGGGATCGACTAAAACGATGAGAAAGAAGGTTGATTATTAA # Questionable array : NO Score: 5.72 # Score Detail : 1:0, 2:3, 3:0, 4:0.86, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTCACTGCCGAGTAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched CTTCACTGCCGAGTAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [76.7-61.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //