Array 1 77835-78290 **** Predicted by CRISPRDetect 2.4 *** >NZ_BBPL01000039.1 Streptacidiphilus albus strain NBRC 100918, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 77835 29 93.1 32 ..............T.....A........ TACATCAGCCTGCCAGCCGCGACGTCGCCGGT 77896 29 93.1 32 G................C........... CTGGGGACGGCCCGATGCTCTTCGCGGATCGT 77957 29 96.6 32 ........................A.... ACGAGGGTGAGCTGGGCGACCAGCATCGCCAA 78018 29 100.0 32 ............................. GTGCAGGACCTGATGGGCATCGACTGGCCCGT 78079 29 89.7 32 .....A.T......T.............. ATCGGGCCGTCTATGTCGTCCAGCAGCCACAT 78140 29 93.1 32 .................A.......C... AGGTACGGGATCAGCTCTACGTTCATGCCGAT 78201 29 93.1 32 .....T........A.............. GCGATGTCGCCACTGAACATGGACCCGTAGAA 78262 29 86.2 0 ..............T......G..A...G | ========== ====== ====== ====== ============================= ================================ ================== 8 29 93.1 32 CTGCTCCCCGCGCCCGCGGGGATGGTCCC # Left flank : CTCGATCCGGTTGCAGTTGGCGGAGCAGCTCGCCGGCGAGGCGGGGCTGCACGTGACGCGGGACAAGGGGGTGCTGCCGGAGCTGGACGGCTACACGCCTGAGCCGGACGTGCTGGTGGTGGACGCGGGAGTGCTCGGTCCGGGGGACGCTTTCGTCAAGCAGGAGCACGTGCACTTCGTTGCCGAGAGCGTGTCGCGTTCCACGGTCGGTCAGGACTATGGGCGCAAGCTCAACCAGTACGCGGCGCGTGGCATCGCGGTGTACCTCATCGTGGACGTGCTGACCGGGGAGTGCGTTCTGTATCGGGAGCCGAAGGGGGACGAGTACACCTCGGCGGTGCCTTACCGCTTCGGCGAGGAAGTCGGTTTCACCCTCGCCGGGGTCGCCGTGACGGTGCGTACCGACTTCAAGAAGATCCGCTGAGTTCCGCCGGTCCCTGAGCCGAGGCAGCGCGATTACGAGTTCCCATGAACTCCTTCCGAGACTGCGCCGAAGCCAG # Right flank : GCCGCAGTCCAGGAGATGCGGGCCGAGTAGACTCCGACGCTGGAGCGGGACGGCTATACCATCGCCGTCTACCTGCCACTCGGCGTCAGGGGAGACGTCCGGCAGTACCTGCACCGGGCAGTCAGCGACCTGGCCCACACGGCGGACTGGCACCAGGGCTGGGACGCGCAAGTCGTCGGGCAGGCTGGGGACCCGCTCGGGGCAGTCGACGGGAAGCGGCGATGACCCTGTACGAGCGCGTTGCTGCCACCCCGGCGGATCTCGCCGCCCTCGCCGAGGCCCGTCTCTGTCGAGAGGCCCTGCCTGGTCCAGGCCATGGCTGCTTCCGGCGTCGACCGCAAGCAGCTCGCCGCCCAACTCGGGGAACGGCCTGGCAGGGTCGCCCGGGTGCTCCACGGCGACGGAGACATCACCATGGGTGGCGTACGAGGCCGAGCTTCAGCTTGTGCCTGCCGGGGAGCTGCGACGGAAAGTGATCTCTGGCCGGACGCCGCCGATGT # Questionable array : NO Score: 3.70 # Score Detail : 1:0, 2:3, 3:0, 4:0.65, 5:-1.5, 6:0.25, 7:0.01, 8:1, 9:0.29, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCTCCCCGCGCCCGCGGGGATGGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [1,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched CTGCTCCCCGCGCCCGCGGGGATGGTCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-9.70,-9.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [4-11] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [36.7-33.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 1825-1369 **** Predicted by CRISPRDetect 2.4 *** >NZ_BBPL01000107.1 Streptacidiphilus albus strain NBRC 100918, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 1824 29 100.0 32 ............................. CCCCAGCCGCCGTCCGTGCTGGTGGCGGGGCT 1763 29 100.0 32 ............................. CAGATCGGGCCGTCGCCGTGCAGGGAGTGGGT 1702 29 100.0 32 ............................. GTAAAGGCGCTGCGCGGCCCCGACGGCTGTAC 1641 29 96.6 32 ............................T CATGGCGAATTGCCGGACCCCCTGGCCCGGAC 1580 29 100.0 32 ............................. CTTCCGTCGGGGTTGGCGGTGTACGAGCCGAA 1519 29 100.0 32 ............................. GCACTCAGCGCCGCGCCGATCGGGGGTTCGAT 1458 29 100.0 32 ............................. TCAGCCAGCAGGACCGAGCGGCCGTGCGGTTC 1397 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 8 29 99.6 32 GTGCTCTCCGCGCAGGCGGAGGTGAACCG # Left flank : CAGCCTGACATGGTGAGCGCTTCGAAGGTTCGCAGCACCTTGTGCTGGAAGGGAGGAGTGATCTTCCCAATGTCGTGCAACGCGGCCCAGTACATCAGCAGGCCCCGCAGGTACTTCAGCTCGACCCCGAGCGCATCCGCTAACGCGCACCGGCGCCGCTCGCTGACCATCCGGTCCACCAGAACCCCCATCACAGCAGCGGTGTCCAGCAGATGACAGATGATGGGATAGGGAGTGGGCAGCCCCCTCTCCTTGCCGACGAGGCCCGCGTCCACCTCAACCGTCCGACTCATCCGTACCTCCATGCCATGCTTACGACCTCCACCGCACTGGAGGCACCCATGAGTACGACACCACGCCCCACTGACAATCACGGTTGGCGAACGTTGCCTGGAGCCCCAAGGGGTCATTTTGTCCACTCCCCGCAGCCAATGGCGCTATGCTCCGTCAGCACTGGTTACGAATTGGCAAAGTGGCTAGTTAGCTGCAGGTCAGGAAGA # Right flank : TCCGTGTCAATCTCCGTTGGGTGCAGCTCTTCCTGAGTGAACGTGATGCCAGGCTGCGAGGTTGAGTCTGTCCTGGCAACAGGACTGGTGGACCAGTTGATGCTCCTGGGTGTACCAGCGCGATGCGCACGGACTTGGGCAGCTGTCGGCCGAGTACCAGCCCGACATGCCCTCCCCGACCCGGCTGCCGTGGACATCCGCGCCGGTCCGCGCGGGGGACGGTCGGCTCCGCCGTCCCGGGGCCCGTCAGGTGATCAGCACATGCGCCGCCGTCACGGGGAGGGAGACGCTTTTGCCGTGGTCGGCGTATCCCGCGATAAAAAACGCGACGATGGCAGCCAATACCAGGAACGTGGCAAGGACACTGCCGATCCTGAGCCGTGTCACCACCACTGGCTCGCCAACTGCCTCGGCGGCCGGCACCTCGTCGAGGGCCATGGCGGCCTCACGGCTCCGCTCCGGGCGTTCCCCCAGCGCACGAACATAGATGGAGATGCCCC # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCTCCGCGCAGGCGGAGGTGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [4,4] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGCTCTCCGCGGAGGCGGAGGTGAGCCG with 96% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-9.80,-11.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [41.7-48.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.41,4.87 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 12208-14371 **** Predicted by CRISPRDetect 2.4 *** >NZ_BBPL01000107.1 Streptacidiphilus albus strain NBRC 100918, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 12208 29 100.0 32 ............................. ACGGTCGACCAGAACATCGCCGCGGTGCTGTC 12269 29 100.0 32 ............................. CCGGTGGTGGCGCCGAGGCCGGCGCGGGTGGC 12330 29 100.0 32 ............................. TCCCTTCGTCGGCCGGCCTTCGCGGCTTACAG 12391 29 100.0 32 ............................. TCGGGCGGGTGAGCTGACCGGCATCGCGGACG 12452 29 100.0 32 ............................. AACTCGATGCGTCCGGCCATGAGGCTGGACTC 12513 29 100.0 32 ............................. GCATGGGCCGCGAGGGCACGGGCGGCAGAGTC 12574 29 100.0 32 ............................. CTGTTGGCTGCTGCTCTGGAGGAGGCGTTGCT 12635 29 96.6 32 ............................A GCAACCGGCCGCCCCGGGCCCCTGACCCGCAT 12696 29 96.6 32 ............................T TCGACGCGGGCCAGCGCGCGGGTTGCGCCCGG 12757 29 100.0 32 ............................. GGCGAGCACGCGATCGCCCACCGGCTGGGCGG 12818 29 100.0 32 ............................. GGGCTCGGGTGGCACATCGACACCCGGGCCGC 12879 29 100.0 32 ............................. GCCTCGTTGCTGGCGTAGGAGTGGCAGCCGGC 12940 29 100.0 32 ............................. GGTCGGGTGGCGGTGCGGATCAGGCCGCGCGG 13001 29 100.0 32 ............................. ATCATGTCCGTGGGCGAGCCGATCGTGTTCGC 13062 29 100.0 32 ............................. GTCTGGCAGTTGACGCCGATGTGCTCGCCGCG 13123 29 100.0 32 ............................. GACGGCATCGCCGTCCTGTCCGACACGCGCCA 13184 29 100.0 32 ............................. GCGTACTTCAGGTCCTGCTCGGGCTTCAGTCC 13245 29 100.0 32 ............................. ATGATTTGTCCCGTTCTGTACGGGAGTTGGTG 13306 29 100.0 32 ............................. GCGGTGGTGGACGTCTTCACCGGTGGCCGGTG 13367 29 100.0 32 ............................. CCGTGCAGGGCCCTGCGCTCCGCATCGGCGAT 13428 29 100.0 32 ............................. TCCGCTACGTCGTGGTCCTGACCTCCGGAGTT 13489 29 100.0 32 ............................. CCGAGCGAGCGGTAGAGGTGCGCTCCGGCGTC 13550 29 100.0 32 ............................. GCGTACACCGCGTCCTGGGCGGGGGACAACTT 13611 29 100.0 32 ............................. CCGACGGCCTCGCCGTCGTCGTAGGCCACGAC 13672 29 100.0 32 ............................. TACGGCTCCATGTCCACACTGACGCGGATCGC 13733 29 100.0 32 ............................. GCCGAGCGCCGCCGCGCGACGTCGTACGGCAT 13794 29 100.0 32 ............................. CGGCCCCGGAAGGGGTCGAGGCGGACGTCGAG 13855 29 100.0 32 ............................. TGGTGGACGTGGTCGCTCGCCGACCACCTCGC 13916 29 96.6 32 .....T....................... AGGACTGAGGACACCGAGGGCCGGTGGGGTCC 13977 29 100.0 32 ............................. CCCTCGCCCGGAACGTCGCCGAGTTGCCCGAC 14038 29 100.0 32 ............................. GTGCCGTCGTGCTGGTCGATGACGGTGCCCTC 14099 29 100.0 32 ............................. TTCAATATCGCGCGGAAACGAGCCGAAACGCT 14160 29 96.6 32 ..........................T.. GTCACGCGGTCGTGGTCCATGGCCCAGTGGTC 14221 29 100.0 32 ............................. TGAAGGTCAAGAGGGTTGATCGGGAGGCGGGT 14282 29 100.0 32 ............................. AACCAGCACCAGGACCGCCTGAGACAGGTGTG 14343 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 36 29 99.6 32 GTGCTCTCCGCGCAGGCGGAGGTGAACCG # Left flank : ACATCCAAAATCTCCTCGACCCCGACGGTGGCGCCGGGCGAAGCGGGGCCGCTGCAGGGACAGAGGCGATGGACGTGGAAGAAGTCGAACTGGTGAGCCTGTGGGACCCGGAGACCGGTCCCGTCAAGGGCGGCACCAACTACGGCGCGGAGGGCTGACGGCCCATGGCCAACCTCACCGTCATCTCCACCACTGCCGTCCCCGATCACGTCCGCGGCGCGCTCAGCCGGTGGATGCTGGAGCCCACTCCCGGTCTGTATGTGGGAACTCTCTCGGGCAAGGTCCGCGACGAACTGTGGGCAGTCGTTGCTGCCTCCGTCGGCACCGGGGCCGCTGTCGTCATCAGCCCGTCCGACAACGAACAGCGCTTCATCATCCGCACCGCCGGCGAACGTCGACGCACCGTGGAGGATTTCGACGGCCTGATGATGATTGTCCTTAACCCCTTGGAGGCGGATAACGAATCGGCAAAGGCTGTGTAGATCCCCAGGTCGGCAAGT # Right flank : CCTGGCGGGGGC # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCTCCGCGCAGGCGGAGGTGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [4,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGCTCTCCGCGGAGGCGGAGGTGAGCCG with 96% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-11.80,-9.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [2-2] Score: 0/0.41 # AT richness analysis in flanks prediction: F [43.3-1.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.14,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //