Array 1 5657-1005 **** Predicted by CRISPRDetect 2.4 *** >NZ_FMMN01000067.1 Tannerella forsythia strain UB4 isolate UB4, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================================== =============================== ================== 5656 47 100.0 30 ............................................... AGCTTGAAAAGACCCTAAGTGGGTTTTCTT 5579 47 100.0 30 ............................................... GCCGGCAACTTGCCGGCCTTTGGGGGCAGT 5502 47 100.0 31 ............................................... TTCTCGTGCGCGGAAGCTCTCGCGTACATTC 5424 47 100.0 30 ............................................... TTCCATCAGGCACCAAAACCATCTGCATGG 5347 47 100.0 29 ............................................... ACCTCCTTTTTCTTTTCATCTGTTTTATT 5271 47 100.0 30 ............................................... CTGATACGCAACCCGGCAAAATGGCTAAAA 5194 47 100.0 30 ............................................... CTGCATGGGCATATATCGAACACCGTCCTC 5117 47 100.0 30 ............................................... CTGCAGAAGAAGCCACACCCTGCGCTCCCT 5040 47 100.0 29 ............................................... TAATCAGAAGTAAAGTACATAACTTCATA 4964 47 100.0 29 ............................................... ATCCCTATGGCTCCTCCGCTCACTGAAAT 4888 47 100.0 30 ............................................... AAATTGCTGGTGGTTACGTGTGCTCATGAT 4811 47 100.0 30 ............................................... AACATGAAAGATTTTAAAGGAACGAAAGGA 4734 47 100.0 30 ............................................... TATGACAGAGGTCGGCGAATATGTGGAGCC 4657 47 100.0 30 ............................................... CCTAACAGAGGTTGGCGAGTATGTAGAGCC 4580 47 100.0 29 ............................................... AGCATCCCATATATCACGCCGTAAGGGTA 4504 47 100.0 29 ............................................... GCCTATTCCGTTATCACCTATATAAATAT 4428 47 100.0 30 ............................................... CAGAGCTCGCCGGATGTGATTTTGATATAA 4351 47 100.0 30 ............................................... GACGTGAAAGGAAAGTTGAATTTCTGGGAA 4274 47 100.0 30 ............................................... TGAGGAAGGGGTATAAAGGAATGAATCGAG 4197 47 100.0 30 ............................................... CAATTCTCCACTCTGCTCCAATCGCTCACG 4120 47 100.0 29 ............................................... TGTCTGCATGACCTTATCTCCGACCCGGA 4044 47 100.0 30 ............................................... AGGAGGTCGTTTTGGATACACAAGAAATTA 3967 47 100.0 30 ............................................... ATGTATGGTGAGGATCAAGAACTTTCTTGG 3890 47 100.0 30 ............................................... AGGATTGGGCATTAAACCTTTAGGCCCTAA 3813 47 100.0 29 ............................................... TGGTAGGTGTATCGGGCAATGCAGGACAA 3737 47 100.0 30 ............................................... AAAAGTCTTTGTCAATCATACTACTTTCTT 3660 47 100.0 30 ............................................... TATACTCTCCATATTCTGTCATATGGAAAG 3583 47 100.0 29 ............................................... TGTTTTTCATGCAACTTCTATTTTTTTAT 3507 47 100.0 30 ............................................... ATACACTACTCGAAATATTTATACCTCTCG 3430 47 100.0 30 ............................................... TGCACGGATATCGTGATTAAGATAGATGGA 3353 47 100.0 30 ............................................... CAGCTGAGAGCATAGACGCTGTTTTCAAGA 3276 47 100.0 30 ............................................... GAGCGAGACATATATATGCCTTCCCCCGTT 3199 47 100.0 30 ............................................... TTACATATGCAGAGTGATCTCTGCAATTAA 3122 47 100.0 30 ............................................... AGTTCTTCCTTTTAAGTTTGACAACTCAAT 3045 47 100.0 30 ............................................... AGTTTAAATGCTCTCCATACTCTGTTAGAT 2968 47 100.0 29 ............................................... AAGAACCACCCTCTCACGCAATTTTTATT 2892 47 100.0 30 ............................................... ACGATCTTGTTTCCTTTCATCGCTTTCTTT 2815 47 100.0 30 ............................................... CGGTGGGTGGTTCTCTCGACATTCGAGGCA 2738 47 100.0 30 ............................................... ATACAGTCCTCTGGTCTAAGATACTCTCCA 2661 47 100.0 30 ............................................... GGCATACCTTTACTTTGAATAGGTACGTGC 2584 47 100.0 30 ............................................... AAATGTCTTTTTTTTCTTCTTTATTCAATA 2507 47 100.0 29 ............................................... TGCATAGCGGTTCCTGCAGTTGCATTTTT 2431 47 100.0 30 ............................................... TAGTAGGATTGATCATATTGTTAGCTACTA 2354 47 100.0 30 ............................................... ACCGTCTCTTGGTAGATAACATACGGCAAG 2277 47 100.0 30 ............................................... GAGTAAAGACAAGCTCTCCTGAAGATTTTT 2200 47 100.0 30 ............................................... CAGATATAGGGTGCGTCCTTCCGAAAGGGC 2123 47 100.0 29 ............................................... AATAACGAATAGCTCTCTGCTACCGAAAG 2047 47 100.0 30 ............................................... AAGTACGGGAATGTAAAAAAAAGAAAGACA 1970 47 100.0 30 ............................................... AACCCGAACATTATCCAAAAAAGTTCGCCA 1893 47 100.0 30 ............................................... GTACATTACTTCATAATCATCATTCAGTTT 1816 47 100.0 30 ............................................... ATATTCGAGGCACCAAAATCACATCATTAC 1739 47 100.0 30 ............................................... CGCATCGCTATATGAAAGAGAAGCAAGTCT 1662 47 100.0 29 ............................................... CAAACTAATTTAAATTGATTCACTTTTCG 1586 47 100.0 29 ............................................... CAGGCTTCGGTAGCGTTCTATACGAAGCG 1510 47 100.0 30 ............................................... GGGAGCCAAATCTCTTTATTCAGCCCTGCC 1433 47 100.0 30 ............................................... ACACGGACGAAGAGTGTCGGAACCCCGAAA 1356 47 100.0 29 ............................................... TATTTCCATGCGATTGTTTTTTTATAGTT 1280 47 100.0 29 ............................................... GAGATGATTCATCTCTAAATTATTAAAGA 1204 47 100.0 29 ............................................... TTCTTTTTCAACCATTATATAATAATTAT 1128 47 100.0 30 ............................................... AGATACAATTTCTACTTTAATCTGATATTG 1051 47 97.9 0 ................................T.............. | ========== ====== ====== ====== =============================================== =============================== ================== 61 47 100.0 30 GCTGTTGTTGATACTACAAAGGTAGTAGTTTTCAAGCAAATCACAAC # Left flank : TTGTGGTTAATTTTATCAATTTTTTATTTGGATTTTCAAATTGAGCCTGTTATCTGTTGATAACATACTTCAAATCATCGATAGAAGCAAAATATCTGTTATGAGTAACATTACGTTTTGTCTTCTTTTACATCATTTCAATAGCCTTTAAATCTAGCGAATAGGGTGGTAGGAAAAATAATTCCAATATGTTTCTAATTTCTTCCGGCTAAGGTTTCAAGATTTTGGCATGATGATATTTGGCATTATCCAGAATCAATAATATTTTCCAGCGTCTGCTGCTACTGTTGTTTTTAATTTGAGTTACAAAGATGAGTTTTTGCAGGAATTTTTGAAATGCCCCAACACGCTTACTTTGTAGTGATCCATTAATTTGTGTGTTTATTATAGAAAACGAAAATCCCACCCTTGATGAGTGGGATTTTCGCTTTGTAGTATCATTTTTTATTTTTTATAATATCTATATATGGTTTTGATGTTCAATATTATATAGATATTAA # Right flank : TACAACATTGCTATCCGAATCTGTAACATGCTGTTGTTGATACTACAAATTTAGATAAAATCCTCGAGATTTTACACCGGGCAGATAAAAACACAAGGCCGACGCTCTGTTTTCTGTCCCCTCCTTTGCGTGTTCTTAGCCACAATTTTACTATCTTGGAGGGAAAAAAATTTAAAAAAATAATTATGAACAGAACTCGAACAGTTGCCGGCCTTGATGTGCACAAAGATAGCATTTATCTCTGTATTATGGGGTATGACCAGGCCATTATTTGGGAAAATACTTATGGAGTGCTTACTCCCGACTTGCGTCAGATGGATCATGACATGAGAGCCCATGGTGTCACCGAAGCAGCTATGGAGAGCACGGCCGTCTATTGGGTTCCGGTATGGAACGAACTCTGCGAATCGATGGAACTCAGATTGGTGAATCCCTATTTCATCAAGCAGCTTCCCGGCAGGAAAAGTGACGTGAAGGATGCCCGATGGATCGCGGAGTGT # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCTGTTGTTGATACTACAAAGGTAGTAGTTTTCAAGCAAATCACAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.83%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-6.30,-6.50] Score: 0/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [70.0-88.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.68 Confidence: HIGH] # Array family : NA // Array 1 36375-47549 **** Predicted by CRISPRDetect 2.4 *** >NZ_FMMN01000056.1 Tannerella forsythia strain UB4 isolate UB4, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================== ================== 36375 30 100.0 34 .............................. CCACGAAAGCGGTTTTATACTTCTCCATATCCGG 36439 30 100.0 38 .............................. TTTTTAAAAAAAACGTTTTACAATAAAGCAAATCTTTT 36507 30 100.0 35 .............................. ACACATACACGTTTACTGTGCCGTCCTCTCGAGGA 36572 30 100.0 38 .............................. GCTTGAATAGCACTTTCTTCAAGCAGTAGGGGCGTACG 36640 30 100.0 35 .............................. ACGCGGGGAGGAAGGCGGATGAGATTGCCGCATCT 36705 30 100.0 39 .............................. CGCGGGCTGCGATGCAGGAGAATCCTGCCCGGCGCGCTT 36774 30 100.0 39 .............................. CCCGTGTCGGGTCGATGATGGAGAGGCTTTTTTTGTGTA 36843 30 100.0 38 .............................. AAGTAAAGTGCATAACTTCGTACTCTCCGCTTCGTTTC 36911 30 100.0 34 .............................. ACCCCTCTGGCTTGGTCGTTTTTTCTGTATGGGG 36975 30 100.0 35 .............................. CATACGTCGCACGAACATCAGATTCAAAAGCGGCA 37040 30 100.0 37 .............................. TTCCTGCATACGTAGAAGAACGTATGCTTTTTTAGTT 37107 30 100.0 35 .............................. TTGTACACTTTGCGCAAGTGTATATTTTTTTGCGC 37172 30 100.0 38 .............................. TTTCATTAGTTCTTTGCGACATTCTAACGTCACATCTT 37240 30 100.0 38 .............................. GGATATTGATTTCGTACCTGTGCGAGTGCAAAATCATC 37308 30 100.0 35 .............................. AACGATAACGAACGAGGTTGGATGATTATACTTTT 37373 30 100.0 38 .............................. GTACGGGCGGTTTGGCGTGCGCAGCCTGCCGCGTGGGA 37441 30 100.0 38 .............................. GTCGTATCTGCTGCAATCTCATCCGCTTTTCTGCACGC 37509 30 100.0 36 .............................. AAACGGCTACAAAAAAGGGGGAACGCTTTCGCGAAT 37575 30 100.0 37 .............................. TCATCGACCCGACACGGGCAGATGTTAGAATAGACAG 37642 30 100.0 37 .............................. ATGTGCGTTCATGATCGGCACGCGCTTTGAGTTCATC 37709 30 100.0 36 .............................. GTAAAATTTTAATTCCATTGTTTTCATTTTTTTTTT 37775 30 100.0 36 .............................. TTTGAAAGAGCACGCAGTTGTCGTACTCAGAGAGAA 37841 30 100.0 38 .............................. ATTCGGACGTTTCAGATACGCGGGCAATGCCCGAACTT 37909 30 100.0 39 .............................. GCCGTATTCGAATCAAGATGATCAATGATATATTTCTTT 37978 30 100.0 35 .............................. AATTTCAAAGTGCGGGGGTCGGATAGTCGGATAGT 38043 30 100.0 37 .............................. CTGTTCTGTCCATATCCGCTACGAAAGCAGATTCATA 38110 30 100.0 35 .............................. GAAGTGAAGTGCATTATTTCATATTCGCCGCTTTG 38175 30 100.0 37 .............................. TTACTTGCCGGTGATTGTTTATTCTTCGACGACGGGA 38242 30 100.0 37 .............................. GGGAAAGTTGTCTTGGAGTCGGCTAGAATCGAGCCGC 38309 30 100.0 39 .............................. ATATACCATATTAAAAAAAAACATGCACGGGAAAATCCA 38378 30 100.0 36 .............................. AGAACCGATGGCGGAGTTGTCGTATTCCATGTTCTC 38444 30 100.0 37 .............................. CTTCAAAAGCGGCAGCGCGCTTTTTTAGGAGGCGCTG 38511 30 100.0 36 .............................. GTATAGGCAGGGGTATAAGACGCCGGCAAGCGTATT 38577 30 100.0 37 .............................. CTGTCATATAAAACGAGAAAACTCTACGATCAGAAGT 38644 30 100.0 34 .............................. TGCACGGGCGGTTTGGATCGCGCCGCCTGCCGCG 38708 30 100.0 35 .............................. TGCACGGGCGGTTTGGATCGCGCCGCCTGCCGCGT 38773 30 100.0 35 .............................. TCGATCTTTAACACTATATCCGTGCAGCATGTGCA 38838 30 100.0 36 .............................. GTACAGGCGTACACGGACGTGCTGTTCGCATACGCT 38904 30 100.0 37 .............................. CAACGGGTCATCACTATCATTTATTAAGTTGATCGCT 38971 30 100.0 37 .............................. CGCTTCGCAGCGCGTTCGAAGCGCGCGGCTTCATATT 39038 30 100.0 37 .............................. AATTTTAAACCTGACCCCCCACACGCTCGTTGTAGGG 39105 30 100.0 36 .............................. GCCTATACAGGATAGGATAGCACTGTTTACGTGTAT 39171 30 100.0 36 .............................. TGCTGCCCGCGTTTACGGTGCAAGTGTTAACGTACG 39237 30 100.0 39 .............................. AAAAGATTCGCAATGTTGTAAAATCAAAAAAAATAAAAG 39306 30 100.0 38 .............................. ATCTTCGCGAATATGAAGCCGCCCGTTTCGAACGTGCT 39374 30 100.0 34 .............................. TCTGGCTGAAACATTAATATGCAACGTCTGTCTG 39438 30 100.0 36 .............................. AAGCGCAACAGATGTTAAACCATATAAAAGACTCTT 39504 30 100.0 36 .............................. GCACTTTTGATTTCGTTGCCCCCTACAACGAGCGTG 39570 30 100.0 37 .............................. CTCTATCGACCCTCTTTACGGGCAGATATCGGAACAG 39637 30 100.0 36 .............................. AGAGCGGAGCGAAGGGGGGGATGTAATCCTTTCAAA 39703 30 100.0 39 .............................. TTGTGGGCAATGCTGATCTTTTGCCCTTTCACATCCATG 39772 30 100.0 37 .............................. CTTGTAAGCGTTTCTACGAGGCTTTTTTGTTGAACGG 39839 30 100.0 35 .............................. AAAGGCCTTCCGTTGTGGGGGATCAGCTTCATAGC 39904 30 100.0 35 .............................. GCCGTGCGCCCGTTCGGGCTAAAGCTACAGAGGTG 39969 30 100.0 38 .............................. TCGATCTTTACCCCAGCCACCACCGCCCCCGCACAGGC 40037 30 100.0 34 .............................. TAACAAATCGTAAGCAAAACGACGTTTTTACTTA 40101 30 100.0 35 .............................. TTAAAAAGTGAGCCTTGCGCACCTCCCCGAAAGGC 40166 30 100.0 35 .............................. AAAGGCCTTCCGTTGTGGGGGATCAGCTTCATAGC 40231 30 100.0 35 .............................. GCCGTGCGCCCGTTCGGGCTAAAGCTACAGAGGTG 40296 30 100.0 38 .............................. TCGATCTTTACCCCAGCCACCACCGCCCCCGCACAGGC 40364 30 100.0 34 .............................. TAACAAATCGTAAGCAAAACGACGTTTTTACTTA 40428 30 100.0 35 .............................. TTAAAAAGTGAGCCTTGCGCACCTCCCCGAAAGGC 40493 30 100.0 35 .............................. AAAGGCCTTCCGTTGTGGGGGATCAGCTTCATAGC 40558 30 100.0 35 .............................. GCCGTGCGCCCGTTCGGGCTAAAGCTACAGAGGTG 40623 30 100.0 38 .............................. TCGATCTTTACCCCAGCCACCACCGCCCCCGCACAGGC 40691 30 100.0 38 .............................. CAACGGGTCATCACTCTCATTTGTTAAGTTGATCGCTC 40759 30 100.0 36 .............................. CCCCGTAGAACTGATGCAAATAGTGTCGTTCGGGTC 40825 30 100.0 35 .............................. TCTAGTGGCGTTTGTCGCGTTGTAGAATACACTCG 40890 30 100.0 37 .............................. TGTCGGGTTGAGATCATCTACGTCAGAGCACAGCATA 40957 30 100.0 36 .............................. AAGAGTCTTGCATACCGTAAGACTCCTCTATCGCTA 41023 30 100.0 36 .............................. ATAGGTTTTACGGCACGTAATATAAAAAAAAATCCC 41089 30 100.0 36 .............................. AATCCGTTTCGTGCGCAACTTTTAAGCAAGAAGCTG 41155 30 100.0 36 .............................. TAATCCCGCGAAAGTGTTTGCGTTCGTTTCCGACGA 41221 30 100.0 37 .............................. AACCGCCCGTGCATGGTCGGTGGTGGCTGGGGTGATT 41288 30 100.0 38 .............................. GTCTTCGGAGGCTCTTAATTTTTAAAAAAAAAGCCCGA 41356 30 100.0 36 .............................. CTTCAAACGCGCTGCAAAGCGTGGAACGTTCGCAGA 41422 30 100.0 35 .............................. ATTTCAAAGTGCGGGGGATATTTTGTTTTTTAAAA 41487 30 100.0 36 .............................. AAGAGAAAGAGGATACCCTCCTTGTCGTGTCCGCCA 41553 30 100.0 34 .............................. TACGGGGAAGTAGACTATACGTGTGATTACACTA 41617 30 100.0 39 .............................. AAAGTATCCCGCGAGGACATGAACGCCGATTACGGCAAA 41686 30 100.0 34 .............................. TAGAGCACCTCCCATTTGCCGTAATCGGCGTTCA 41750 30 100.0 38 .............................. CTTTTCGCTTTGTAATACTCACCGTAGAGCACCTCCCA 41818 30 100.0 36 .............................. TCATGGTAGTTCCACGCAAGCACTTCGGGGATAAAC 41884 30 100.0 35 .............................. GAACGATAACGGACGAGGTTGGATGATTATACTTT 41949 30 100.0 37 .............................. CCGTAAAGGGGGCAGCGGATACACTCGCTGTCTTATA 42016 30 100.0 34 .............................. TAAAAAAAGGGGGAACGCTTTCGCGAACCCCCTA 42080 30 100.0 36 .............................. TTATACGCTTTGATAAAGCGCATATGTTTTTGCGCG 42146 30 100.0 39 .............................. CAGTCGGTCATATAGAATGTAAAAACTCTATAATCACTG 42215 30 100.0 36 .............................. AGAGCAAACTCGTGGCCACCGATTCAAAATTACCCT 42281 30 100.0 37 .............................. TCTTCATCAGCGTAGTCTCTTCGATCTCCGCCATGAA 42348 30 100.0 34 .............................. CGGTGTGAAAAAAGTCTCCAACGCCGTTTGCCGT 42412 30 100.0 37 .............................. TATTCAATATCTCGGCGGCGGATTGATAGTCCGCAAC 42479 30 100.0 36 .............................. TTTCAAATGCTTCGACAACATCGCTGCCACAGATAA 42545 30 100.0 37 .............................. TCCAAGGCGGTAAGTCTGATTGTTCTCACGTACTACA 42612 30 100.0 35 .............................. TTGGCGCGCTGATGGCCTACGCAGCCTCTCCCTCG 42677 30 100.0 34 .............................. TACGAAAAGTCGAGTATGTTCCGCTCTCGCTTTT 42741 30 100.0 36 .............................. GTAGCTCGCTTTCTCGTTCTCGATCATCTGTAATCG 42807 30 100.0 35 .............................. CACACTCGTTGTAGGGGGCAACGAGATCAAAAGTG 42872 30 100.0 38 .............................. CGTACATACGCTTTCTTGCGTAACGAGGAGAAGGGCTT 42940 30 100.0 35 .............................. TATGAGTCTTCCATTGTGAATTTTGCCCAGGCGCA 43005 30 100.0 36 .............................. TGTGTTGGTCGGTTGTACGTTCGACCTACCGACATA 43071 30 100.0 37 .............................. GCCTATACAGGATAGGATAGCACTGTTCACGTGTATG 43138 30 100.0 36 .............................. TTATCATAAGTGTTAATATATTACAAATTTAACTTT 43204 30 100.0 35 .............................. CGTAGCGCTGTTATACGCGGTATGGCGCGGTTCTG 43269 30 100.0 36 .............................. TGTACGCTGCGCGAATATCCGCTTCAAAAGCGGCAG 43335 30 100.0 34 .............................. GCTTAAACACTACTTTTTTTAGGCAGTAGGGGCG 43399 30 100.0 34 .............................. CCTTGTACGCCCACCCTTCAAGGGGCATAGAGGT 43463 30 100.0 38 .............................. TGCAGCAAGTACACGCTGCTGAGGATTCGTACACGATT 43531 30 100.0 37 .............................. CAAGTATGTCGCGCGTCAAAAGAAACTTGCCGTTGAA 43598 30 100.0 36 .............................. CGTGTACGGCGTGGATTTGGTTTTTCCCGTACATAT 43664 30 100.0 39 .............................. GGGCTAAGAGCCTTATGGAAGACTCATATGGAACAGAAG 43733 30 100.0 35 .............................. CTGGTCTAAGATACTCTCCATATTCTGTCATATGA 43798 30 100.0 38 .............................. CGTCCTATTCAGAACCTGTACGCCGCGCCCTTTTTTCA 43866 30 100.0 37 .............................. TAGTGTGTTACAATTACACAAGAAATGGAAGAATTTC 43933 30 100.0 37 .............................. TATCTATCGGTTTTTAAATTTAATCTTCACTTTCTTT 44000 30 100.0 34 .............................. GTGTCTGGGTCGGTGAATGACAATCCGTCACACG 44064 30 100.0 38 .............................. GCTTAAACACCACCTTTTTCAAGCAGTAGGGGCGCACG 44132 30 100.0 35 .............................. TATAAGTCTTCCATTTTGAACTTCGCCCAAGCGCA 44197 30 100.0 34 .............................. TATATAACAATACACGTAAAAAAATTCGTGTATA 44261 30 100.0 39 .............................. CCGCCCCTGCGTGGGCGGTTTGGTGTGCGCTGCCGCACG 44330 30 100.0 37 .............................. CAGTGTCTCTTCGATAAAACCAATCCACCGTGCGTTT 44397 30 100.0 35 .............................. GTTGTTTTCAAGAATCTTACATTTTTCATACGACT 44462 30 100.0 34 .............................. TGCGTTTGTTTAACGCACAGTATATGTTAAACCA 44526 30 100.0 36 .............................. ATCGAAGATGTGGTATAAGACGCCGGCAAGCGTATT 44592 30 100.0 36 .............................. TATGAATCTTCCATTATATTTTTCGCCCAGGCGAAA 44658 30 100.0 38 .............................. TGAAGGGGTAAGCGGCTACACTCGCAGTCTTATACCCA 44726 30 100.0 36 .............................. TTATAGAACTGAACACGATTCCTTCCGTGTCGACGC 44792 30 100.0 37 .............................. CGCGCGTCTATTGTGCGTCTACGAGAATCGAACTCGT 44859 30 100.0 38 .............................. CGATGTGGAGCGTACGTGTGACGGATTGTCATTCACCG 44927 30 100.0 37 .............................. CGAGTCCCTGTTAAACAACCTCGGCATCGTCGCCGAG 44994 30 100.0 36 .............................. TTAGATTCTGCGAGGCTGTGACGCCTCAAGGCGATA 45060 30 100.0 37 .............................. TTAAAAAGTGAGCCTTGCGCACCTCCCCGAAGGCGCG 45127 30 100.0 34 .............................. CCTGCCGCGTGGGATTGTTGTACGCGGTATGGCG 45191 30 100.0 35 .............................. TATTCTGTCATATGAAAAGTTATAATTTTATTTTC 45256 30 100.0 37 .............................. GTCCACACCCTCTACGGGGTTGTATCCCCGCACTGTC 45323 30 100.0 37 .............................. TAATATCAATCGCGGCGTATTCGAGATACGGAGCGAT 45390 30 100.0 34 .............................. ACTCCTTTCTAAATGCACTATACTCGTTCTGTGA 45454 30 100.0 35 .............................. TCACACCCTACGATCCGCCCTTCTGCGTCGCGAAT 45519 30 100.0 36 .............................. CGCGAAAGTATTTGCGTTCGTGTTAGACGATGCTAA 45585 30 100.0 39 .............................. AACGAAGATGCAATACGTGCAGACGCGCTAAATGTGCGA 45654 30 100.0 37 .............................. CGACGCGGAAGGCCGCGTCGTTGGGTGCGAGGGGCTT 45721 30 100.0 36 .............................. TTTTTTTATGGCCGTTTCGGCCCTCTCTGTATCTAC 45787 30 100.0 35 .............................. CGGCCTGCCCGCGCGTCGGATCGGAGGGCAACTCG 45852 30 100.0 35 .............................. AAATTTCAAATACCTCAATTAAACATAGTCCACCC 45917 30 100.0 35 .............................. TTTTTCGATGAATTTATTATACAATATTTCTTTCG 45982 30 100.0 39 .............................. ATATAATGGATTTGGTTCTAACCCGTTTTCGAGTATATA 46051 30 100.0 36 .............................. TATCATAGTCTACAACAAGCGCGCCTCTATGCTCGT 46117 30 100.0 38 .............................. CCGGCCCGGTCGTTTTTTCTGTATTGGGGGGGGCAACA 46185 30 100.0 36 .............................. AATGTAGATTTGAATATGGGGATATCCCCACATTCA 46251 30 100.0 39 .............................. TAGAGTGGAACGGCCGAGACAGCGATGAGCTGTGCGGCT 46320 30 100.0 36 .............................. GGAGGTGGAGATGTTAGGGGAGAATTGAATACACTG 46386 30 100.0 35 .............................. GGAATATTAGTCCGCGACGCGGAAGGCCGCGTCGT 46451 30 100.0 39 .............................. TAGAGTGGAACGGCCGAGACAGCGATGAGCTGTGCGGCT 46520 30 100.0 36 .............................. GGAGGTGGAGATGTTAGGGGAGAATTGAATACACTG 46586 30 100.0 38 .............................. GCGTTGCCCGCTTCCTCTTTCGGATGCGATGCAAATAT 46654 30 100.0 38 .............................. GGCGGTCTCTCCGTTATGGGAGGCGGATTGGATGGATT 46722 30 100.0 36 .............................. ATGATACAAATGTATAAATAATTTCTGAAATCTGTC 46788 30 100.0 36 .............................. GTCAGTTCCGGCTCTCCGACCGCGTCGCGCCACATG 46854 30 100.0 35 .............................. CGCACGGGTATAGCGCCGTCGCACTTAGGTGCGTT 46919 30 100.0 40 .............................. TGTGTTATGTGTGGTCTATCGGAACTTCATCAAATAGCTA 46989 30 100.0 37 .............................. CGATAATAAGCGACGTAGTCTATATTCTTTTTTGCGC 47056 30 100.0 39 .............................. CCAGACAGGCGGATACGGTTGTCCACCTGCAACAGTCCT 47125 30 100.0 35 .............................. CCTAACTATGCAGCCGTTGTCTCGCAAAAAGCAGC 47190 30 100.0 36 .............................. GCCGCACCCTCTGATTGATACATCGGTATATCCCGT 47256 30 100.0 37 .............................. AATTCACCCACAAACTCGGCTTTGTCAAGTCCGCATA 47323 30 100.0 35 .............................. TTTTATTTAAGTATTTAGTTAGACAATAAGTTATT 47388 30 100.0 36 .............................. GCCCCTTACAATTCCTTACCCATTCCATTTTTCACT 47454 30 93.3 36 ..........C......G............ ACGCAAACATAAGAGCTTCATATCGCTTTGCCCATC 47520 30 86.7 0 ..........C...G..G...........T | ========== ====== ====== ====== ============================== ======================================== ================== 169 30 99.9 36 CTTTTAATCGGACTATCATAGAATTGAAAC # Left flank : TAAACCGTTTAAAATGTACTGGTAATGTATGTGATTCTGGTCTATGACTGCGGCGAGAAACGGGTTGGGAAAATGCTCAAGCTCTGTCGGAAATATCTGAATTGGATACAAAATTCGGTTTTTGAAGGCGAAATTACAGAAGTTAAATTAAAAGAGTTAACTTTGAAGGCTGAGAAAATAATGAACAGCGATGAAGACTCTCTGATTGTTTTTTCAAGTCGACAAGAAAAATGGTTGGATAAGCAAATCTTTGGTAAAGAGCGGAGTAGTATCGATAACTTCTTGTAATAAGTTGTCGGTGAGTATGAATTTCCATAATAGAAATCGAGGCATCGCTATTATGCGTTCTTTGACACATTGAAAATCAAAAGATAAAATTAGTTGTCGAAGTGCGGGGTTTTTCTTACCTTTGTGCTTCGACAACTTTGTTTGTTAATTTGTTGATATAATTGAAGGATAGATTATTGAGAATCAGTAATGTTTTTTGTCGTTTCGAACGA # Right flank : TTGTCGTTTCAACTACTGAATGCAACTTTATGTTTCAAATTTAAGAAAAAGATTTCTTCTGGAGAATAGAAATTGAGTTTGTATTTTGGTCTTTCGTTGATTCTGTATTGCATCTGTTTGGTTATATTGTTACTAAATTCATTGCAATTTGATTTTATAGGGATGTACTGCCTGATCAGTTTGTTTGTATTCTCAATCAATCCTTTTTCCCATGAAGAATAGGGATGAGTGAAATATATCTGTGTATGTAGCTTCTTGGCTAATGATTAATGATCTGCAAACTCGCTACCATTATCTACGGTGATGGAGTGTATATGCTCTTTTTGTATGGCAGCAGTATATCGTAAACGATTTTTGAATGCTCTTTTGCATTTTTCCCTTTGGGCAGTTTTTGCATCATGCAAAAAAACATAGTTCTTTCCACTAAGGTCAGGATATCCCCTTTGCCGTTTTTTCCGACAATAGTGTCCATCTCCCAATTTCCAAAGCGTTGTTTGAGA # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTTTAATCGGACTATCATAGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [71.7-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0 Confidence: HIGH] # Array family : NA //