Array 1 126038-124728 **** Predicted by CRISPRDetect 2.4 *** >NZ_NRTQ01000076.1 Escherichia coli strain A72 NODE_13_length_163781_cov_59.9758, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 126037 29 100.0 32 ............................. GTGACCATAAGGGCATTTCATACTGCCTTGCT 125976 29 100.0 32 ............................. GTGAACGTGACAACGCCCGCGACAGAAACGTC 125915 29 100.0 32 ............................. GGAAGAAGCGGTAAAGCGGGTTCCAGTTCAGC 125854 29 100.0 32 ............................. AAATTAATTTCGAAACGGGCGTTGATGGTGAA 125793 29 100.0 32 ............................. GCTGGCGCACCTTACGCAAAAATAGACGTAAA 125732 29 100.0 32 ............................. CCAGGGAGCGAAGCTGTGGCCATGCTGAAAGG 125671 29 100.0 32 ............................. GGGTTCTATTTCCTCGGGATTTGCCGACACGC 125610 29 100.0 32 ............................. GTCAACGCTGGTCAGGCGTGGTACTTCCTCCG 125549 29 100.0 32 ............................. GCTGCCGCGCTTTCGGTGTGGGAGCAGTATGA 125488 29 100.0 32 ............................. AAACTCCGTGGTGTAGTGCGTTTGTTGGTGCG 125427 29 100.0 32 ............................. TTGGTATTAACGGGAATGTAGTCACTCCAGGA 125366 29 100.0 32 ............................. GCGATCGTATTTTCCGCTACGTCGCTCAAATG 125305 29 100.0 32 ............................. TCGTTGATGGTGTGATGAGTGTACAAAAAAAA 125244 29 100.0 32 ............................. ACGACTGAATCCGGCGAGGCTATCAACTGGCC 125183 29 100.0 32 ............................. CCGCACACGTCGAGCTGGTGGGGATTAATGCT 125122 29 100.0 32 ............................. CAGTAAACGTTCGCGCGTTCTCGCGCTCACGA 125061 29 96.6 32 ............................C TCTGTGTATTCGCTACCAGCCAGCACCGGTAC 125000 29 100.0 32 ............................. CAGGGTAACTGGCTGCTCCTCAACCATTCCGC 124939 29 96.6 32 ........C.................... GGGTTTTAGCGACCGGACCAGAGTACGCAACA 124878 29 96.6 32 ........C.................... TTGCGCCTTAAGTTCCTTAACTTCCTCTGTAT 124817 29 96.6 32 ........C.................... GGAGTGATGAATTGGAAGTAACGGATAACCGC 124756 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 22 29 99.4 32 GTGTTCCCTGCGCCAGCGGGGATAAACCG # Left flank : GTCCTTGCCGCCGGTGAAATTGAACCACCACAACCTGCGCCGGATATGTTACCACCAGCTATCCCGGAACCTGAATTGCTAGGTGATAGTGGTCACCGGGGGCGCAGCGGATGAGCATGGTCGTGGTTGTTACAGAAAATGTCCCTCCGCGCTTACGTGGACGGCTTGCAATCTGGCTCCTGGAAGTACGTGCCGGTGTTTATGTTGGTGATACATCAAAACGTATTCGGGAGATGATCTGGCAGCAAATCTCCCAACTGGCAGGTTGCGGAAATGTGGTCATGGCCTGGGCGACCAATACCGAGTCGGGTTTTGAATTTCAGACCTGGGGTGAAAACAGACGTATTCCGGTGGATTTGGATGGGTTACGGTTGGTTTCGTTTCTTCCTGTTGAGAATCAATAAGTTACCCGTTCTTTAAAAATAAGGAAAAGTTTGAATTTAGTTGGTAGATTGTTGTTGTGGAATAAAATTGTTTAAAAACAGATACGTATGCTTAGT # Right flank : GACGCACTGGATGCGATGATGGATATCACTTAGAGTTCCCCCCGCCCCTGCGGTAGAACTCCCAGCTCCCATTTTCAAACCCATCAAGACGCCTTCGCCAGCTCTTTCACCAGAGGTAGCATTATCCGCATAACGTCACGGCAGCGACGTTCTATTCTTCCAGGAAGTGCCTTATCAATATGTTGTTGATTATCCAGTCTTACGTCATGCCAGCTATTTCCCGCAGGGAATGCAGCTGTTTTTGCGCGTTGCTGATAACCATCCTTATTTCCAAGATTCCAGTTGGTCGCCTCCACCGAAAGTACCGCAATACCGGCTTTGTCGAAAACTTCGGCGTCATTACAACAGCCAGTACCCTTCGGATAATTTTTATTCAAACCCGGATTGGTCGTTGCGGCAATTCCATGACTACGCGCAATTGCCAGCGCCCTGTCGCGCGTTAATTTCCTTACTGCTTCAGGGGTTTTTACACCGCTGTTGAAATACAATTTATCGCCAAC # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCTGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [5,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCTGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-5.80,-11.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [43.3-71.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //