Array 1 285028-283317 **** Predicted by CRISPRDetect 2.4 *** >NZ_SMCQ01000001.1 Longibaculum muris strain DSM 29487 Ga0244711_101, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================== ====================================== ================== 285027 31 100.0 35 ............................... TTCTTTTGAAACTCCGGCAAGATAAGATACTTAAT 284961 31 100.0 37 ............................... AAAGAAAACATTTAGATCAACACTCCTTTCTTTATAA 284893 31 100.0 35 ............................... AATTGAAATCAGTACAAGTAATACTAATGCACTAA 284827 31 100.0 36 ............................... AGCGAAATGAACACCACTCCAAAAAACAACAGAACC 284760 31 100.0 36 ............................... AAAAGATGGTTCTATTGAATTGAAAATTTATGATAG 284693 31 100.0 37 ............................... TTGGATGGTTCTAATTTTTCTTTTATTACATCCTACA 284625 31 100.0 38 ............................... TTTTCTTTACAAGTAGAAATAACATAATTAGCAGTATC 284556 31 100.0 36 ............................... TTACCATGCCTATTTAATGTAAGAGCCTGTCTAACA 284489 31 100.0 36 ............................... GAAAAAGGCTCTTTTATATCAGGAATATGAATAACA 284422 31 100.0 37 ............................... CAGGGTAGCGGAAAGACTTTATCTGCTGTTAATTATG 284354 31 100.0 36 ............................... TTGAGAGAGCAGTTTTCTGTTGTTTGCAAGTGTAAT 284287 31 100.0 35 ............................... ATAGAAACCGCCAGCATTAGAAGAACTATTCCAGC 284221 31 100.0 36 ............................... TGGTTTTGTTTTATATGTTTTTATTGCAAGAAAATG 284154 31 100.0 35 ............................... CCATTACTTTCAATTGGACTAGTTCCACGCAAAAG 284088 31 100.0 36 ............................... TTGATTAGGAGTCATCGCTCCTCTATCAACCATTGC 284021 31 100.0 36 ............................... TGCAAATTAAGAAACAAGAAATTGCGAATTGATGGT 283954 31 100.0 35 ............................... ATGTTTGACATGTATGATACGGATATATTTTATGA 283888 31 96.8 37 .......................T....... GTAATTGCATTGTATGTGTCCATGTAATTCATTTTCT 283820 31 100.0 37 ............................... TGCAAAAGAACCAATTAAACCAGGCATTTCATCAGAA 283752 31 100.0 36 ............................... TACGATAAAGTTGTGTGCGACATAAATGGCATGTTC 283685 31 100.0 36 ............................... TCATGATGAAATCTAGACTTCCACGCTAATTCTTTA 283618 31 100.0 37 ............................... TTATCACAAAGAACTCTAAACCAATCATAACGGTTTT 283550 31 100.0 36 ............................... GCTAATAATAGCAAGTACTAATTTTAATTACAAGTA 283483 31 100.0 38 ............................... GGTTCAGGGACATCGTTTAGTGCTAAAGCAGAAGCAAC 283414 31 93.5 36 ...............G..........C.... TAATCATACTGAATAATCCCTTAACAACTCCACCAA 283347 31 93.5 0 .............T............C.... | ========== ====== ====== ====== =============================== ====================================== ================== 26 31 99.4 36 ATTCATAATCTAACCATATTGGAATGTAAAT # Left flank : AAATGTATATTTTTAGTTAAAATCACATGTTCTACATCTAATACAAAAGAAATTCCATCAATAAAATCTAATGTTCTTATTAAGTGTTTTTCTTCTATATTACATATTACGATATCGTTTTGTTTAATATCTTCGCCTACCTTTTCTAAAATATTATAATCATTGATTTCGTATTTTTTTACAGTAACTAAATATTTTTCATCTTCATCAAATTCTTCATTATCAAGTAACCATTTTTTTAATTTATCCATTTTTATTCTTCCTTTCAATAATACATTATACTTGTTAAAAGAAAAAAATGTTCTCTTCTAAAGCGAATTAAAACGTATATCTATAAACATATCTGTCGATTTCAATTATGTAAAAATCATCAGAGATTGACACAACTCATTTACAAAATTTATAAAATTAATTTTATATAAATACAAAAGGCGTAGATTATACAACTATCTTATGCTATAATTTAATTGTTATTAAGAGCAATTACTTTGATTTCACGG # Right flank : AACCATATACCATCCTTATTAGATTCTCCAGCAATCGATATGTAGTCTAAGCTAATTTAAAAAAAGAAAAAAGATATAACTATACTTTACCTCTAAAGTAATTATATCTTTTAATTTTGAAATTTAATTATCCATTAATTTGAGCACTTTGAATAACCAATTGACTTGCTTTTACACGATTATAATCATGTCTTAATGCTTCTTTATTAATTTGTTCTAAAACTTGCTCAACTGTCATTTGATTTTGATTAGCAATAGCTTCAATTTGTTGATCAAGTTCTTCATCAGATGTTGTTAAGTTTTCAACTTTCACAATTTCATCAATAATAGCTTCAAATTTTGCTTGTTGTTTTGCAGCAGGTTCTAATTGTTGACGTAACATATCTTCATTAGCACCTGTCATTTGTAAATATTGTTCCAAAGTCATACCTTGTCTAGCTAATTCATTACGAAGATGATTCATATGTTCATTCATTGCTTTTTCTACATCTTCATCACCA # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTCATAATCTAACCATATTGGAATGTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:77.42%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-0.20,-1.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [68.3-75.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.78 Confidence: HIGH] # Array family : NA // Array 2 296706-300893 **** Predicted by CRISPRDetect 2.4 *** >NZ_SMCQ01000001.1 Longibaculum muris strain DSM 29487 Ga0244711_101, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================== ======================================== ================== 296706 31 100.0 38 ............................... CATAATAGAACCAACAATAATCGTTCCAATAAACAAAA 296775 31 100.0 37 ............................... CTACAATTCGAGGAATTAAACTAACACCAATCATAAA 296843 31 100.0 39 ............................... CTATTTCTTACGAAACTCAGTAGCAAGCCAAGTCATGGA 296913 31 100.0 39 ............................... CTTTAATGCGAGTATAGCGACTAGCAAGAGTCTTAACAA 296983 31 100.0 38 ............................... CGCTCATAACTCTTTACACCATCAAAGTTAAACAAAAA 297052 31 100.0 39 ............................... CATTTAATGTAAGAGCCTGCCTAACAGCCTTAGGAAAGA 297122 31 100.0 38 ............................... CTCATTAAAACCACCACCACTATGCTCAACAAGTTCAA 297191 31 100.0 38 ............................... CAAAAGACGCGTAACATTCTTATAGTTATACCAACATA 297260 31 100.0 37 ............................... CCCAAATGTAATATTTTTATTCCTAATTGACCTAAAA 297328 31 100.0 38 ............................... CTTTAAGACGCGTCAAACGACCACCAAGAGTCTTTACA 297397 31 100.0 37 ............................... CGTATCGTTTATAAGTTATTATAATTTCGAGGTTAGA 297465 31 100.0 39 ............................... GAATAAATAAAAGAATGACACACAAAAGAAAATCGCAAA 297535 31 100.0 37 ............................... GAATCGTTCTAATACGGTGCGCAATCTGATTAATGCA 297603 31 100.0 38 ............................... TCACAGAGATACCAGGAACGTCAGATATACTAAGACAA 297672 31 100.0 38 ............................... TAGTTTTGTCTATAAAGATAATAATATAGAACTTGTTA 297741 31 100.0 39 ............................... TTGTCCGCAAATAACAAATAATTTAGCCATAATATAAAA 297811 31 100.0 39 ............................... TTACTGCATTACCTTCTTGAATATCTATCTTACCATCAA 297881 31 100.0 38 ............................... TTCTTCAGCCTTATCAGAAGTCGAAGGAACAATTTCAA 297950 31 100.0 39 ............................... TTATGAATACTTGCTATTTAACTGTTAATAATGTTTAAA 298020 31 100.0 39 ............................... TTACAAATAGTAGAGCACTAGCGCAGAAAAGGGGTGCGA 298090 31 100.0 40 ............................... TATAGAAAGTAATGGGGGAGGTAATAAAAATTGATTATAA 298161 31 100.0 39 ............................... TTCTCACGATAGTTATTAGATTTAAGTCTCTTATTCTCA 298231 31 100.0 39 ............................... TGAAAGCAAGACATGTATTCCCATACTCGTATTTTTCGA 298301 31 100.0 37 ............................... TACTCCTCCCCGAGCGCTTAAAAGACAGACGCTTCGA 298369 31 100.0 37 ............................... TTATGAACTAATTGATGATTATATTCATAGTACAAAA 298437 31 100.0 38 ............................... TGCTAACAACAGCAATAATATTTCTCTTTTAATCTTCA 298506 31 100.0 38 ............................... TTATTCAGAATTATTAAATTTAGAAAAATCATCATTAA 298575 31 100.0 38 ............................... TTCTTGATTGACAATAGAAACAGTAAAATACAATGAGA 298644 31 100.0 38 ............................... TGATAGTATTCTTTTGACATTAACGAAAGGAATTGAAA 298713 31 100.0 39 ............................... TGTATTCTTTTTCTGAACCTTCACCATTAAATGTTTTCA 298783 31 100.0 38 ............................... TGAATTCCAAGTGCTTCTATTGTCTAAAACACCTTGCA 298852 31 100.0 38 ............................... TGAAGATGACCTCGTTAATGATCCGATGGGTGATGAGA 298921 31 100.0 38 ............................... TAATGTTGGCACAACTCTATAGCCATTTTCATTTTCGA 298990 31 100.0 40 ............................... TCAGGAATTTCCTCAAAATACAAAGAAACACCATCCAAAA 299061 31 100.0 38 ............................... TCTCTTAAAATCACTATTCATCAGCATGTTATCTCTTA 299130 31 100.0 39 ............................... TAAAGTTGTTAATTGGAGACAGAAGCATAGACTCATTTA 299200 31 100.0 38 ............................... TACGAGATTAAATCTAAAATAAACATTGAACATCTAGA 299269 31 100.0 38 ............................... TTTGTCTTAATTGCTCTTACTCCTGCGGCTTTACACCA 299338 31 100.0 39 ............................... TACAACATGGCTAAATGGTGAGCGTTGGAATGATGAAAA 299408 31 100.0 38 ............................... TAGATGGAAATTGATGTTCTCATTCAAACATTTAAAAA 299477 31 100.0 38 ............................... TTTATTCCAGTTGTTACTGTTATAGCATCACTCATTAA 299546 31 100.0 38 ............................... TGTGTGTGATTCGAGTTGGGAGGCTGTAAACGATTTAA 299615 31 96.8 37 .............T................. TTTCTTTTAAATCGGTGAGCAATCAACTATAAAACGA 299683 31 100.0 39 ............................... TATATTAGCGTAAATGAATATATTAATTCAAAAATGCCG 299753 31 100.0 38 ............................... TCATAATCTTGAGCAAAAGATGAGACAAAATGACCAGG 299822 31 100.0 38 ............................... TATGGTATAGGCGTGATCCTCTACCCTGGAGGATTTGG 299891 31 100.0 39 ............................... TGTAGAAAGTTTTTCAAAAACAAAGGCACAACTTGTATG 299961 31 100.0 38 ............................... TTTTGCACATAGAGAAAGGAATTATCACGTCTAAATGG 300030 31 100.0 39 ............................... TTCAAGAAAAGTAACAGAATAATCATAATCAGGAACAGG 300100 31 100.0 40 ............................... TGATGGTAAAACATTAAAACAAATAGCAAATTATTTCCAG 300171 31 100.0 38 ............................... TCCAAAAGATACTGATTTAATGATATCTAATCCACCAG 300240 31 100.0 38 ............................... TTATCATCAATTTGGCTATTACTCAAATGTTCAATAGG 300309 31 100.0 38 ............................... TTTGATGGATATGGTAAACAGTTTACAAATGCTAATAG 300378 31 100.0 38 ............................... TCCAACCGTTATCGCAACTCATCAATGGTCGTATGATG 300447 31 96.8 37 ...............A............... TTCTAACATTCAAGATATTAAACTGAATGAAAATGAG 300515 31 100.0 39 ............................... TCTTTCAAAAACTGTAATATTACAGCATAAAGAAAAAGG 300585 31 100.0 38 ............................... TTTCGTTATCATGCGGAACGTCAAGGACGCTGAAAGCG 300654 31 100.0 38 ............................... TTTTTCAAGGGTTTATGTTACTAACGTGTTTCTATCAG 300723 31 96.8 38 .......C....................... TTGAATATATTACAAATTCATATCATGTTAATGTAAGG 300792 31 96.8 40 ........T...................... TTAGTATCATATGGGATTAAATCGAAATATACATCTTGCG 300863 31 83.9 0 .............T.......AA....AG.. | ========== ====== ====== ====== =============================== ======================================== ================== 61 31 99.5 38 TATATAATCTAACCAGAAATTGGAATGTAAA # Left flank : TAAACATATAATAAATGAAAAAAATTATGAAGGATTTAAAATATGGTGGTAATATGTATCTAATAGTAGTATATGATATTAAGCAAGAGGGTAATTATTCTAAAAGGCAGAGATTTGTATTTAAAACGTGTAAAAAATACTTAAGACATATACAAAATTCAGTATTTGAGGGTGAATTGGATAGAGCACAATATGCTGCATTAACTTTTGAATTAAAAAAATATTTAGAAAAAGATGTTGATTCATGTTTAGTATTTTCCGGAAGAAGCAATGTATGGATGAAAAAGGAGTTTATAACTAGAAAGCAAGACGAAGATGATCAGTTTTTGTAAGAAATTAAAAATAGTCGAACTCCATTATGTAAAAAATATTGGAGTTCGACAGGATATATTTCTATAAATAAAAAATATATTTTGTTTTTATCATTAAAATATGGATACTGTTGGAATAGAATGTTATAATGTAATTGTTTCTTATCAATAATTTTGATATTTAACGGA # Right flank : ATTTGTTTAACTGTCTTTTGAAATTGTAAACACGATGTAACTCAGTTACTTATTTAAGTAACTGGGTTTTCTTTTATAGATTAATCCATTATATATGTTTATAATGCAAGTAGGGAGTGAGATAAAAGATGAGAATAAAAGATAATGAAGATCTGTTAATTTTACAAATAGAATTTGAAACATATGAAGAAAAAGAAAAAGTCTTAACATTAATCAATACAATGAATACAAAAATTATTGGCTATAAAAGAGATAAAAAATATTTTATACAAATAGAATCTATCTATTATATAGAATTAATCGATAAAAAAACATTCATCTATACAAAAGAAGAATGCTATGAATCACCATTATGGCTCTATCAAATAGAAGAACAATTAGATCAACAATTTATCCGTGTCAATAAATCAACGATATTAAACATGAAATATATCAAAAGTTTAAAAGCAGATATTGGCTCAAGAATTATCGTCTATTTAGACAATCAAGATCAAGTTCTT # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TATATAATCTAACCAGAAATTGGAATGTAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:77.42%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.30,-0.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [78.3-75.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA //