Array 1 564721-568858 **** Predicted by CRISPRDetect 2.4 *** >NC_008346.1 Syntrophomonas wolfei subsp. wolfei str. Goettingen G311, complete sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================== ======================================== ================== 564721 31 100.0 36 ............................... GTGCCTAGTAGGTGAAGTGGTGTTTGTTATGGTGCG 564788 31 100.0 37 ............................... ATCATAATAAGAAGCTTCATGGTCGTGACAATTGCAG 564856 31 100.0 36 ............................... TATTAAAGCGACCGGAAATTTGTAAACCGGGGGTGG 564923 31 100.0 38 ............................... TATTAAAGCGACCGGAAATTTGTAAACCGGGGGTGGTG 564992 31 100.0 37 ............................... TATTAAAGCGACCGGAAATTTGTAAACCGGGGGTGGG 565060 31 100.0 37 ............................... CGGCAAAAAAATTGCATGGTACTACCATGCAGGGCAG 565128 31 100.0 39 ............................... GATATATTGATGGTAAAATTTGTAAACTATGCCCCGTCG 565198 31 100.0 39 ............................... CACCCAGACCATGGTGGAACCAATGAACAAATGACCATG 565268 31 100.0 37 ............................... TATAATAATAGTAATATAAAAATATTAAGGAGTTGAG 565336 31 100.0 35 ............................... CAGCATAAAGGGAATATTTTTTGTTATTATACTTG 565402 31 100.0 38 ............................... GGAAATCATAACAGGCTGGCAGTTGGTGAAGACATTTG 565471 31 100.0 37 ............................... ATATCTTTCAATTTATCACTACTATACTTGTGCCGGG 565539 31 100.0 36 ............................... TATCAGATAATAGCCTAACAGATGCCCAAAAAATTG 565606 31 100.0 36 ............................... TAAGCTTATAGCATCTTGATTTGCTATTTTTTTAAG 565673 31 100.0 35 ............................... CTACTCAAACGAACTTGAAAAAAGCATTGAAGCAG 565739 31 100.0 35 ............................... TCAGCATGATATACTTAACTCAAGAGATAAGGAAG 565805 31 100.0 38 ............................... CTGGTTTTCGTTTTGTAGTTGGTGGATGTAATTCATTG 565874 31 100.0 39 ............................... TAAACCTGTTACCCGGATCACTTAAATCAAACAGGACTG 565944 31 100.0 35 ............................... TTTGTCATAATCATCCATCAGGTGATACAATGCCG 566010 31 100.0 36 ............................... AAGCTATCCCAACATTAAAAGAAAAAACTAACAAAG 566077 31 100.0 35 ............................... ACAATTGCCGATAAAACCTATTCAATCCGCTTAAG 566143 31 100.0 36 ............................... TTAGAGTGCTAACTAAAAACCTAAAATAAATATAAG 566210 31 100.0 35 ............................... TTCATAAATCTTTAAAAAATTTTTTAAAATCTAAG 566276 31 100.0 35 ............................... CTTCAAACATTGTTATACCTCCTTGTTAATATCCG 566342 31 100.0 36 ............................... TGCGAGAAATGAAAAAATATTGCATTAAATTACCTG 566409 31 100.0 37 ............................... AATCGAACAAATTAAAACCCGCTACCGGGAACTAGCG 566477 31 100.0 37 ............................... TTTAATACCCTCTATAAGATATATAAGCAACTGTTAG 566545 31 100.0 36 ............................... TCTAAGGTCTGTTATGGGTATTTGTTGTAATTGTCG 566612 31 100.0 35 ............................... TTTGAAAAATACATAGCATCCAACCTAGTAGGCGG 566678 31 100.0 36 ............................... GATAAAAGCGACCGGAAATTTGTAAACCGGGGGCGG 566745 31 100.0 36 ............................... AAAAAATGGTAGACCTAACAGCCAGCAAATTCTCAG 566812 31 100.0 36 ............................... AATGGTGCGGAAAAGTTTTTGTAGACCGGATAAGTG 566879 31 100.0 37 ............................... CGGTCAACATAAAGCAATGTGGTATTTTTTCGGTTAG 566947 31 100.0 36 ............................... CTTTTGCCAATTCAATTTTAAGCTGGCCGGACATAG 567014 31 100.0 38 ............................... ATGTTCTACTCTATATTTTTCAGCTTCTTCCTTTGTGG 567083 31 100.0 35 ............................... AAGGAGGTAAATAAATAAATGATAAATAACAGTAG 567149 31 100.0 35 ............................... AATGGTGCGGAAAAGTTTTTGTAGACCGGATAAGG 567215 31 100.0 38 ............................... TAGTAGTGTTGAGTGCTATAAGGTAAAAGGATTAATTG 567284 31 100.0 37 ............................... CATAATAGCTCATAAACAAGCAAAGCATGGCCTATCG 567352 31 100.0 35 ............................... GTATTACCTCCCCATTAATTATATTATCATTGTAG 567418 31 100.0 38 ............................... TTAACATAATATCACCTGCATATTTACCGATAATTTCG 567487 31 100.0 36 ............................... ATCATGGACAAGGAGCATAATTTTAGCATTGTTTGG 567554 31 100.0 36 ............................... GCCAACCTGACAACCTTTGATGTATTCCATTAATTG 567621 31 100.0 34 ............................... AGATATATATTGTAAAAATATTTTATATTGCTCG 567686 31 100.0 36 ............................... TTAGGCAATTACAAGTAAAATATAAATATTTAGCTG 567753 31 100.0 35 ............................... ACCGCAACAAACCATGAAACCCATAAACAATACGG 567819 31 100.0 35 ............................... AGTGGTCAGATATGTAAATACAATTGGAATAAGGG 567885 31 100.0 38 ............................... AGTGGTCAGATATGTAAATACAATTGGAATAAGGGATG 567954 31 100.0 36 ............................... ATGTCGTTTTTAGTGCTTACAAATCCCTATTTCTAG 568021 31 100.0 36 ............................... AATTGGAATAAGGGATTGCACATAGTTGAATTTATG 568088 31 100.0 36 ............................... GGGAAGTCATTTTACTTTAGTGTACTATTACACTAG 568155 31 100.0 35 ............................... GGGTAAATTAGTAAGAAAATAATTGCCATTTATGG 568221 31 100.0 37 ............................... ATAGAACAATTTGAGTATATCACAGCTAAAAAATTAG 568289 31 100.0 35 ............................... AGAATTGCAATTGTAAAGCCGATCATAAAATAACG 568355 31 100.0 37 ............................... AGCTATTCAAATGACCTTGAACTATCCATAGAAGCGG 568423 31 100.0 35 ............................... ATATATAAGAGTTTATCGTGGTTTTGATTATGGAG 568489 31 100.0 40 ............................... AAAGCATCATATCTCTATCGCTTGTCTCCCCGGTCTTAAG 568560 31 100.0 36 ............................... AAAGAGGCGAGAATCCTTGTGATGGGTGCAATATGG 568627 31 100.0 35 ............................... TGCTGTATTGCCAGAAGATGTTAGCCAAAATGAAG 568693 31 96.8 36 ...........A................... TTGGGTGGGGAAATTCTGACTGTTTACCAGGCTATG 568760 31 100.0 37 ............................... TCACAAGTGAGCCGGGTCTTGTCGCCCCGGGTCTCGG 568828 31 96.8 0 ............A.................. | ========== ====== ====== ====== =============================== ======================================== ================== 62 31 99.9 36 TCGCACCCCATGCGGGTGCGTGGATTGAAAC # Left flank : GGATGCTTATCCGGCATTCATTTGGAAATAGGGGTGAATAATCATGATGGTGTTGATTACTTATGATGTTAATACTACTGACAAAGATGGGCAGAAACGTTTGAGAAAAGTGGCTAAAAAGTGCGTTGACTACGGTCAACGGGTTCAAAATTCAGTTTTTGAATGTTTATTGGAACCAGCACAGTTTGTCATGTTAAAGAATGAATTAGAGGCAATAATAGATGCAAATAAAGATAGTTTAAGATATTATATGCTTGGGTCTAACTGGAAAAGAAGAGTTGAACATGTGGGAGCAAAAGAAACCTATGATCCAGAAGGTGTCATGGTACTTTAGCGCGAACCTGAAGTAGTTGGACAAACTGTGGGCGGTTCGCGATAGCTAGTTATAGGGTATTAGGATGGTTTTCTATTCTATTAATGGAGCCAATTTTATAAACCCCTTTGTTTTCGCGGATACAATGCTTGGGAATCCCAATGTATAGCAATTAGTAAAGTAACAG # Right flank : CCGTCAGTGATAGTACCTCTCAAAATATCCCTAAACAGTTGCGGTGGAGCAACTTGCAGCTCTGTTTATGATGATCGTGGGCTCCTCGTTTTATAAAATTTACCTCCAGGGTTAATTTGATTCTTGACTCTGTCATTTGTCCATGCTATAGTAAATTTACCTCAAAGGTAAATTACAAAACGAGGTGATGGGTTGCAGATAGAGTATAAGAGCCGTGGAATCGAAAAGGTGTGTACAAACGCTCACGAGGCTGAAAAGAAACACGGAAAAAATATGGCGGCGAAGATACACCAGCGAATAGATGAAATAACTGCTGCGGATTCTGTCGAAATGCTGATTCAATATAAAATCGGCGGCTGCCACATACTCAAGGGAGATAGAAAGAAACAATATGCCATGGTTTTAATTCAGCCCTACCGCCTTGTATTCGAGATGAAAGGTTCTGAGATTCAAATTGTCCGTGTCATAGAAATCATTGACTATCATTAAATCTGTTGCAT # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TCGCACCCCATGCGGGTGCGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [6,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched TCGCACCCCATGCGGGTGCGTGGATTGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-9.00,-5.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [63.3-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [10.05,0 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 2 2000384-1999255 **** Predicted by CRISPRDetect 2.4 *** >NC_008346.1 Syntrophomonas wolfei subsp. wolfei str. Goettingen G311, complete sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ======================================= ================== 2000383 36 100.0 35 .................................... CTTTATTAATTCTTTATTAGATAATATTTGATGAA 2000312 36 100.0 37 .................................... CATATAGTTTTTTATAGCTATCGTCGACATGGTAATC 2000239 36 100.0 36 .................................... TTTATTAGCTTTATCTATGACTATTTTTACAAAAAC 2000167 36 100.0 38 .................................... ATTTATAACAGGAGGTCATCTGCTATACAAGTTATTAA 2000093 36 100.0 35 .................................... CTTAATTTACTTCCACAATCAGGACAATGAGTAGG 2000022 36 100.0 38 .................................... TAACGCCTCTTGGGTTTTTTCGAAACTGGTTATTCTAC 1999948 36 100.0 35 .................................... TCCCTTTCTCCTTCGTTTCCCTCTCGCCCTTCTGG 1999877 36 100.0 34 .................................... TCCGCTGGAGGGGATGATTCAAGGACAAAGTTCC 1999807 36 100.0 37 .................................... AAGATATGAAGGTCAAATATGTTATCAGGTACATGGA 1999734 36 100.0 38 .................................... TGCATTCCGCTGGAGTGGATGATCCAAAGACAAACTAC 1999660 36 100.0 39 .................................... GCGCAATTCTTTGTAGTACATTCGAATTCCTTGTAATAC 1999585 36 100.0 37 .................................... CAGCGGCAGTGATTGACTATCTGCTGTACTATCTGGT 1999512 36 97.2 38 ............................G....... CCTCTGGATTCTGCCTTCAGAGCTTTAAACCTTTCAAC 1999438 36 100.0 39 .................................... ACTATGTTGCATACGGCATATGCTTCTTTCAAGGCATTG 1999363 36 100.0 37 .................................... CAACGATTGCTGGGCTATTGAATTGTTTCATTAGCGG 1999290 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ======================================= ================== 16 36 99.8 37 ATTAAAAACGAAGGACCCCTTTAAGGGGACGGAAAC # Left flank : TTCGGGTCTTTACGATCGTTCTTGGTAGGGCTATTGTCATCCAGTTCCTTCGTTCGTTTGACGTGGAACGGATTGACTATGGCCAGTTTATGGCCTTGGCGTTTGAGATGATCCCCTAGCGTAAACCAATAATGTCCTGTGGGTTCGAAGCCGACGATGATACCCGTCTTTTCTTGCTGCTTGCATATATCACGCATCCACTGACCCAATCGCTCAAATCCTTGGTCTGTGTTGCTAAATTTCAGCAGCCTGGCTAGCTCCATCCCTCTGTAATCAAAGGCTCTTGCGTAGTGGGTCTCTTTGCCAATGTCAATTCCAACGACCAGAGTCTCAAATTTGATTTGCGAAATCTTTTGATTTTGTGTATTTTTCATATAGGGACGCCTCCTCAATCTTTTGTTTTGTGCCTTTCTGTGGGGATCAGCACAATTCAATTGTATTGATGGGCGTCTCTTTTTTCAAAGACCGTTCTTAAGCATTACAGGAATGCTCCTTATTAA # Right flank : TCAAGTTTATTTTGGGAGGTGATGATATTGAGTTTTCTATATGTTTATGAGCGGTCTGCAAAAATTGGAGTACAGGAAAATTGTGTTGTGGTGGAAAGCAAAAAGGAAAATCTGAAACGTATCTTGCCAATTGAGGGAGTGGAGAATGTAATAATCTTCGGTGATGCTTCACTTAGTTCCAATTGTGTAAAGCAATTTATGGAAAGAGACATCAATCTAACCTGGCTTTCGAGCCGAGGAAAATTTTATGGACGTCTGGAATCCACGCGAAATGTTAATATTTATCGGCAAAGAAAGCAATTTGCTTGTGGCGAGGATGATGAATTTTGCCTGGCTTTGGCCAAAAGGATAATTCTGGCCAAAGTGAAAAACCAGATTACCATTTTGCGCCGTTATCGAAGAAACCGGCCTGAAAAATCAGTGCAGAAAATTATTGATGCTATGGCCAAGCTATTACCTATAATGGAGCGAGTTCACAATAAGGACGAATTGATGGGACA # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTAAAAACGAAGGACCCCTTTAAGGGGACGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.56%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-6.80,-7.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [65.0-61.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.78 Confidence: HIGH] # Array family : NA // Array 3 2002515-2002263 **** Predicted by CRISPRDetect 2.4 *** >NC_008346.1 Syntrophomonas wolfei subsp. wolfei str. Goettingen G311, complete sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ======================================== ================== 2002514 36 100.0 34 .................................... ATCTTTTGCTGCAGTTCATCATCAAACACCCTGA 2002444 36 100.0 40 .................................... GGTATACTCTGCTGTAACCGTAGTGGTTGACTATCTGCCC 2002368 36 100.0 34 .................................... CTGCAACGCCACATTAATAGGGTCGTTCATTTGG 2002298 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ======================================== ================== 4 36 100.0 36 ATTAAAAACGAAGGACCCCTTTAAGGGGACGGAAAC # Left flank : ATTGTAAAAAGCCTTAATAATCGTTATTGCGCTTTTATGCAGGATGTATCTTTGGATGCTCCCGAAGCCATGGAGCAAATAGCCAAACATATTCACATTGTTCGTTATTCTTTGCATTCGGCTGTTTTTTACCTGGAAAGAACTAAAATTACTGGGTATATGGGCAGAATAACAGTGGTCATTAGTGGTACCGAACAACTGGCTCGATTGGCAGGTGCTTTGCTTTCATTCGCTGAGTATAGCGGATTGGGAATAAAAACTGCCCTGGGTATGGGTGGTGTAAAAATTAGGGCATTAGCGTAGATTTGCTGTTTTGCATCGCTAATAAACTATATCTTATGCGCCGCAAGCAGGAATTGGAAGAGAATCGAAGCAATGTAACGAAAGAGCCTAACTGGCTATTAGGGGTTGGATGATATATGGGATTAAATGGCACAATCAGTTTTAGCTCCGCAAACTGTCTTTTTAAAGCAGTCATAATGAGGTATAGCCACGACAGG # Right flank : TTTAACCAATCCATCAATAGTATCCCTCCCTTAATAAACTAAGCCTTACTTCAAATATCGCTCGTTTTCTCACAATTTCATTTTCATTACGGACAGCCCATCTCTTGTTTGTTACATCTTTGTGTAATTATGGATGATGGTGAGTACGCTCCGTTAAGCCGCTTAGTTTCTTGTATTGTGGCCAGTGGGGATTCCACACCATCTCCTGGCAGCAACCCTCCCATGTCTTCCTGGGTCTAAAGCCCTTAATTCCTTCGTTCTGCCTATCCAAGAGGTGGAACGTCAGTCATGCTCCTAAACGGGGTCATTGCCCTCATGGTAAAATTCAACCTGACTGTCCCGGCTCCCGTTTTTATCGTGATTTTGATTCTTGAAGCTTTGTTCATCACTGCTTACTGAGTGGCTGTGAGTAGCCATTCTTACGCTGGCAATGAATGTTATAAACAATCGTTATGGTAAAGTCTCTATTGCCATTCTAGGCGGCTACTCTAATTGATTGT # Questionable array : NO Score: 5.86 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTAAAAACGAAGGACCCCTTTAAGGGGACGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.56%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-6.80,-7.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [66.7-58.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.37 Confidence: MEDIUM] # Array family : NA // Array 4 2058260-2055857 **** Predicted by CRISPRDetect 2.4 *** >NC_008346.1 Syntrophomonas wolfei subsp. wolfei str. Goettingen G311, complete sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 2058259 30 100.0 36 .............................. ACGTCTTGCCAACGTAAGCCCAATATCTCACCTTGC 2058193 30 100.0 36 .............................. CGGGTAATCAAGCCGAAATATCCGAACACAACACCA 2058127 30 100.0 37 .............................. ATGCGATTATTTTGTTTTGCAGGGGCTATTCACTCCC 2058060 30 100.0 37 .............................. TTGGCAATCAAGAACTTTTCTACTATTTCCCGCCACT 2057993 30 100.0 36 .............................. TGCAAAATCAAGAATGCGGCCCGGGATTTCTTAATA 2057927 30 100.0 37 .............................. TTGCTTCCCAAACCCCGCCGAAAATGCTTTTAACGCC 2057860 30 100.0 35 .............................. ACATCAATCAGGGCTTTCCCTTCAAAAATACTATT 2057795 30 100.0 35 .............................. TTGTTCAGCATTATTCACACCCCTTTCAAGCCTGG 2057730 30 100.0 35 .............................. AACTTTCTTATTCCCTCCCAGTAATCGCCTGTTAT 2057665 30 100.0 35 .............................. CTTTTGAAAACTCTTTTTTCCGCCGTGTGTTCTGT 2057600 30 100.0 35 .............................. GTATCTACTCTTTGTTTATCTGGAGGCGGGTATAA 2057535 30 100.0 37 .............................. CGAATGCCTTGCAGGGCTGTTTTAATATTGCCGTCCG 2057468 30 100.0 36 .............................. ATGCCAAAGAAGCGGACCTTTACGCTGAGGGCAAAA 2057402 30 100.0 36 .............................. ACCGCCAAAGCCATTGCAGTTGCGGAGATCATGGAC 2057336 30 100.0 36 .............................. AAATCTACAATTTCTCCATCCCTTTTTTTAATCTTA 2057270 30 100.0 37 .............................. TGATGCTACCGAAAAAGAACTGAGGACGATGTAACAG 2057203 30 100.0 36 .............................. ACCTTACTGCCTGCTCTATTTGCCAGCAATTCGGCC 2057137 30 100.0 35 .............................. CAAGATTTCCTGGCCAGACACTTTATTACTCAGCC 2057072 30 100.0 36 .............................. TGTACCTTGCCGAAGGAATGTTCGTTGACCTGTATG 2057006 30 100.0 35 .............................. TTGTAGAATATGTCCAGTTGGTTATTAACATATTC 2056941 30 100.0 36 .............................. TCTATTGATTCCCTCCTCTCGCTGTTTTCGGATTCT 2056875 30 100.0 38 .............................. TTAGCAAACCATTAGCAAGATTTAATCAGCTACCCGGC 2056807 30 100.0 36 .............................. ATGAAGAAGATACAGAAATGCTCAGGGAAGGTTGCA 2056741 30 100.0 36 .............................. CTGCCGGAACTGGTTGGCAGTGAAAAGCAAGTCAAG 2056675 30 100.0 37 .............................. TAGTCCGTCCAAGAGCGGCGGACAAACTATACTTATT 2056608 30 100.0 36 .............................. AAAGCCCTGGGGTTGTCTATTCCGCGAGTCACATAC 2056542 30 100.0 36 .............................. ATGCTTGTCGCGTCAATATAGCTTTTTAATGACTCG 2056476 30 93.3 37 .........AT................... AGGGAATCGGCATCCAGGAGTGGAGCCTGGCAGTTAA 2056409 30 96.7 35 .A............................ ACCAGTCGCCCCAACCCGGTAACGGCCTCAGCATC 2056344 30 100.0 36 .............................. AATTCGTGCATGGTCCATTGTTTTTTCTTCCGCTCC 2056278 30 100.0 36 .............................. AGGTTTAGGGTTATTTCATCGTTGAAACTGATTCTG 2056212 30 100.0 35 .............................. ACCAGTCGCCCCAACCCGGTAACGGCCTCAGCATC 2056147 30 100.0 37 .............................. TCGGGATTATGGCCGTAGTTAGGATCGATCAGCCCAA 2056080 30 100.0 36 .............................. GGGTCTACTGACTCCAGAAACTCATATTTGATTTGC 2056014 30 100.0 35 .............................. TCATGCCCTACTGAGATATTCATGACGTTTTTAGT 2055949 30 100.0 33 .............................. CCTCATGGCTGGGAACCTGGAACCCGTGGGCAG 2055886 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ====================================== ================== 37 30 99.7 36 GCGGAACCGGCACATTTGATGTATTGAAAT # Left flank : GAAATTTGTCCCATTTTGCATGGAGGATAAGAAATGAAAAACAAACTAAATTACAATTATGTCATCGTTTTCTATGATGTTGGCAAAAAACGGGTAGCTAAAGTTTTCAAGATTTGCAAACAATACCTGAAACATTTTCAAAAGTCTGTTTTCAGAGGTCATATTACACCTGCAAACTATCTGGAACTTAAGGGAAAGCTTTTAAAAGTGATTGACATTGACTATGATTTTGTAACATTTATCCAAACGATAAGTGATGCCTCCTTTAATGAGGAGAGTATTGGAAATACGGGGATTAACCCGGAGTCGATTATTCTATGATTTTTTCCAACCCCGATTGCATATTAACCGGTCATAAAACGGCTAAAATGCCGGGGCGAAGGTAGAAGTACTATTATTCTCTTAGGAATTAATTGCCGCTTGGAAAAAATGAAGGGAAAGTCTGATATAATGTTAATTAGCAGATTAGTTTAACTTCAAAAAAGTCTGATTTTATCCTG # Right flank : TGTTATCTATGGCAGGCATAAGTTCGGGTATAAGCCTCTCCAGCAAGCCCAGTTCCAGAAGCTTGCGTATACCCTGGAAAGGTAGCTCAATTGACTTATCCTTCTGGATAGACAAAATATCGAGAAATCAGATAAAGCTTAGCATTTTGTTTTAAGCATCGGAAGAAACTGCGGAGCAGTTTCAAAACACCGCTGCAACAAGGTGGGGGATTAGAACCCGCCGCCTGTTTTTGTTAATAGGAACCCGGACGCTAATAGAAGCGGGGGACATATTTCACCTCGTTTTATATTCCTTTTTGCTCATAACTGCATTATGATATACAAAAAAATCCTGAGGTGAATAATGGAGAAAATTATCTGCTTGTTCTTTATTTATGCTTTTCTGGGATGGTGTACGGAGGTTATATATGCAGGGGTCAACCGGGGAGTTTTTGTAAACCGGGGCTTTTTAAACGGACCTATTTGCCCGATTTATGGGTTTGGCGTACTTACAGTATTAA # Questionable array : NO Score: 9.25 # Score Detail : 1:0, 2:3, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCGGAACCGGCACATTTGATGTATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:56.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.60,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [51.7-73.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.18 Confidence: HIGH] # Array family : NA // Array 5 2868371-2856131 **** Predicted by CRISPRDetect 2.4 *** >NC_008346.1 Syntrophomonas wolfei subsp. wolfei str. Goettingen G311, complete sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================= ================== 2868370 30 100.0 37 .............................. TCCTTGCATTACCTGTTGTAACATCGCCATCGCCTGC 2868303 30 100.0 37 .............................. TTTAATTGTCATAAATCCCAATATTACGGCATTTTAC 2868236 30 100.0 36 .............................. TACCGTCAAAAGTGCAAGAAAATACCTTCCTGATGC 2868170 30 100.0 36 .............................. GTAAATCCTCACATGCGTCTGTGTCTCCATTAATAC 2868104 30 100.0 37 .............................. ATATTGTTGTTCCAGTGTACTTTTCTGAATGTACCAC 2868037 30 100.0 38 .............................. TCGATAAAATCCTTAGTTTCCTCTAAGCGGTCATTTAC 2867969 30 100.0 36 .............................. TTTTCTCGCCATTGTTTACCACTCCTTAATTATTTT 2867903 30 100.0 35 .............................. TCCCAAACAAAACCACGTTGCACCGCATTGTCAAA 2867838 30 100.0 37 .............................. TTATATTGTTTATCTGTCATTGTTTGGCCTCCTATCT 2867771 30 100.0 35 .............................. AATTCTCCGGCAAAAAATGCGCATGGTACTATCAT 2867706 30 100.0 36 .............................. CTGATAGAATAACAGCGCAAGATAAAAGGAATTACA 2867640 30 100.0 36 .............................. CCCGGATTAAGGCCGCAGGTTACACTATAGACTATA 2867574 30 100.0 36 .............................. AAATGTGAAATGAACACAAAGGAAGTAGAAAGGGAA 2867508 30 100.0 36 .............................. TATGCAATTTAAAAACAGTCAAGCAAGGTAAAAAAA 2867442 30 100.0 35 .............................. TTTATCCAGGGAACTATAACAGAATCACAGTTAAG 2867377 30 100.0 36 .............................. TAATGCCTCTTGGATTGATTGAAATAGTTCCCCTTT 2867311 30 100.0 36 .............................. ATGTGAGAGATCGACAAGAATTAAAAGAAAAAATTA 2867245 30 100.0 35 .............................. CGTTCCAATATTGCGTGATATCCTCTTTCTTCCTG 2867180 30 100.0 35 .............................. AAATACCTTCCAGGTAACAAAATAACAGAACTATA 2867115 30 100.0 36 .............................. CCGGGAACTAGCCCAGCAACATCACCCCGACCATGC 2867049 30 100.0 36 .............................. ATAAAATATGTTCTCGTGACTTTGGAACTGATGATT 2866983 30 100.0 39 .............................. TAGGATAAATATTTAAAATAGAAACCAAATAACCGTTTC 2866914 30 100.0 38 .............................. ATATAAAAATGAAAGAAGGTAATAAAATGCCAATCAAA 2866846 30 100.0 36 .............................. TGGGTAAGAGTACCCGAATATATTGCCTGTAGAAAT 2866780 30 100.0 37 .............................. TAATCGTCATTGATTGTAGCTGATTTTGTCCCGGCAA 2866713 30 100.0 35 .............................. CGTTGTTTTCCATCAAGCATGCTATACCCGTTTTC 2866648 30 100.0 35 .............................. TCAAGTAGCCAAAAGGCAGTTGTGGCAGTTGATGT 2866583 30 100.0 35 .............................. CTGTGGCACGAATGGTCCCAGTGGAGTGGCTCGGA 2866518 30 100.0 35 .............................. AGGGGCTTAAGGTCGGGGACGAGGTTGTTTTGACC 2866453 30 100.0 35 .............................. ACATACTCCCACGCCTAAAGACGTGGGCTTTCTGT 2866388 30 100.0 37 .............................. TAGGCGATGATAGCTTCTGCAGCTTGAAGGCACGGGG 2866321 30 100.0 35 .............................. TCCGAGGGAGTTTCAGAAGGAGCCGCCGGAACAGG 2866256 30 100.0 37 .............................. CTGGCCTGCGTGCATAGCCTTTTCCGGGATATGTTTA 2866189 30 100.0 36 .............................. TCGTAATGGTCAACCCAATATTTGAAGATATGCTGC 2866123 30 100.0 34 .............................. TATGACGACCTGGACAATTTAGACAGCGAAAACA 2866059 30 100.0 35 .............................. AGTAGTTGAAGCCGGGGAATTGCCCCCGGCTTTTT 2865994 30 100.0 37 .............................. CCACCTGGTTTCCGGTAACATTGTTTAATACTTGCCC 2865927 30 100.0 37 .............................. AGAGGAAGTGCATGGTCACGTTGCAAGGTTTCCCCTT 2865860 30 100.0 35 .............................. CCCCTATCACTGCCCCGGTATTATCGCCCGGAGCA 2865795 30 100.0 36 .............................. ATAGTAGCCAGGCCTGGTCTTTTTACTGCATTATTT 2865729 30 100.0 37 .............................. TGCCTGCCGCCGACATACTGGCAAACAAAGACTTTGC 2865662 30 100.0 36 .............................. TCTGCTGGCGAAGTTTCCCGGTAAATGACTTTAGGA 2865596 30 100.0 34 .............................. ATGACGGGGGCGAAGGTTTCTGTCGCCGATGCGC 2865532 30 100.0 37 .............................. TGTCATTGGAATATAGCGGGTCGGCGGTAAAAGTACG 2865465 30 100.0 36 .............................. TATCCCAGCGCGTAGGAATATAGAATTCAACTTCGG 2865399 30 100.0 35 .............................. CATAGTTTGGCATTATGTCACCCCTTTCTGTTTTT 2865334 30 100.0 38 .............................. TATAATTCACACGGTAGAAGTCGTGGGTTCGAAACCCT 2865266 30 100.0 35 .............................. GAGGTTACCGGTCAGAGTATGGAGCCCACTATACA 2865201 30 100.0 35 .............................. AGGAAATCGTAAATATGAGTGGGCTTAACCTTATC 2865136 30 100.0 36 .............................. CCTAAAACCGTACCATGGAAAAACCTTTCCTCTCTC 2865070 30 100.0 37 .............................. ATGTACTGGGCCAGCACGGCCGCGGACGGTGAATTTA 2865003 30 100.0 37 .............................. TTGGACCCCAGGGGATAGGCAAAAGCACACTGTTTCA 2864936 30 100.0 38 .............................. TCAAAATTGAGCAGTCCGACTGGCAGAAAAATTTCATT 2864868 30 100.0 36 .............................. CAGAGCATAAGCTTTATGTTTTGGCTATTTGCTTTT 2864802 30 100.0 36 .............................. ATCTCATCCGGCCAGGTCTTTTGCGCTACTCGCAAG 2864736 30 100.0 35 .............................. CAACGAGTTGACATTGGCCTGCTTGTAGCAGTGCC 2864671 30 100.0 35 .............................. AAAGTATTAGACGGGTTATTAAGTGAGGTGATAAA 2864606 30 100.0 35 .............................. CATTGAAAAGGTATATAACATTTATTCCCCTACTA 2864541 30 100.0 36 .............................. TGCAGGGGGAGGTTGGTATTATTGGAGCGGGAACAA 2864475 30 100.0 37 .............................. TATAAAAGTTGATGCCGATAAGTAAAAAAGTCGGTAT 2864408 30 100.0 36 .............................. TATCAGCTGACTTATAGATCGACCCGCCTCCACCGG 2864342 30 100.0 35 .............................. CGCAATGGAACGGTAAGCCCATGCACCCTAATAGC 2864277 30 100.0 36 .............................. TTTTCATCCCCGTTTGGCTGGAAATTTCTCAGCCAA 2864211 30 100.0 37 .............................. ATAGTTGCGTCCCCTACCACCCAAACGACCACGCCGC 2864144 30 100.0 36 .............................. TATTGTCTATCGGCGCATAGTACACCAATTCTGGGC 2864078 30 100.0 36 .............................. TCGTCAGCAAAACAACCGCATTCAACTTCTTCTCCG 2864012 30 100.0 36 .............................. TGAGTATAGGGGCAATACCCAACCCCTTCTTTCTCC 2863946 30 100.0 35 .............................. TAATCCCAGACCAGCATATCCGTCACTGGTCCGTA 2863881 30 100.0 35 .............................. ATTTCGAATTCGCGACCACCTAATGTGGCCGACTA 2863816 30 100.0 35 .............................. TAAATTGTAAAACCGCGATATATCGGACATTAAAG 2863751 30 100.0 37 .............................. AATCTCCACGATAACCTGACCCGCCAGCAGATGTGCG 2863684 30 100.0 36 .............................. CCCGCAGACCATTATATTCACGGATCATCACCTGCG 2863618 30 100.0 35 .............................. CCCTGTGCTGCGCTATTTGCCGCACTAAAATCGTG 2863553 30 100.0 37 .............................. GCCGAAGTGCTGGGGCGGGTAGTAGAGGGGGACCTGG 2863486 30 100.0 35 .............................. ATGGGAGGATGAAACATGAAGGAAAAAGCAATAAC 2863421 30 100.0 35 .............................. CCCTTTGTGTCCTTTGCGTTTGCCCACTGTTTAGC 2863356 30 100.0 35 .............................. TCACAACCTCACCAACAACAGGCGATTCGCACATG 2863291 30 100.0 35 .............................. ACCGGTATTTGGGTGTCGAAGTATGCGGCGCACAA 2863226 30 100.0 36 .............................. TGAGCACTGGGGGTCCGCCCTGGACCGGCATCTAGG 2863160 30 100.0 37 .............................. AACAAAAACGAGGATAAGACCGAGGAGCTTGATACTG 2863093 30 100.0 35 .............................. AGGTATCATTTACATACACCTCTACCTGTTCAACT 2863028 30 100.0 35 .............................. ACGCACCGATGCTGCCTTCCGGCTGGACACCGGTA 2862963 30 100.0 36 .............................. CTATTCCGGCACTCATTATGTCGGTAGGTTTTTGCC 2862897 30 100.0 35 .............................. CCAAGCGATTGGGAATATAGGGCGGCTATTTTATT 2862832 30 100.0 37 .............................. CGACAATGGCAATGCCAACGGTAGCTACGGTTTTCGC 2862765 30 100.0 37 .............................. CATCCTCGGCTACTCCCGGCCCTCCCAGCCGGTTACG 2862698 30 100.0 36 .............................. CCCGGCTGTGGTAGGGCGGGGCAAAACCGTAGGGGG 2862632 30 100.0 36 .............................. TTCTCCCTGTCGGCTAAACCAAAAAGGTAAGTGGTA 2862566 30 100.0 36 .............................. AAAGAACTGGGTCGGGTTGCGGGAGTTACCGCTCTG 2862500 30 100.0 37 .............................. CCCGAGCACGGTGGCCCGGTCTCCCCGGGAGGTATCG 2862433 30 100.0 35 .............................. CATGAAGTATATATCTCCTGCTATACTAAACTTGC 2862368 30 100.0 36 .............................. TCGAAAATGTAGAAAAAGGATAGTAAATAGGCACAG 2862302 30 100.0 36 .............................. TACTAAACTTGCAAAGGAGTGATAAACATGGCCAAT 2862236 30 100.0 38 .............................. TCTCCCGGAACATCGGGAAACATGATAAAACGAAACTC 2862168 30 100.0 36 .............................. CTCATTTTAAATTCCTCCTTTCCGGGTCTAGCCCGG 2862102 30 100.0 37 .............................. TCCTCCTGTCATCCGGGTATCTTGTTTCAATCGATTT 2862035 30 100.0 36 .............................. CTCTTACCCTGCTCCGGGCTGGAACCGGGGCAGTGA 2861969 30 100.0 36 .............................. TGCAAAAATGTTCCCGGTCTGCACCATCAAGGTAAG 2861903 30 100.0 36 .............................. AAAGAAATCGTTTAGAGGCCTAGCGGCCTCGCATCC 2861837 30 100.0 35 .............................. AGCGAGGTCCTCAGCCTCGCACTCAAGGGAACAGG 2861772 30 100.0 37 .............................. AAAAAGTACACAATTTTCGAGGACCTCAGATCCTCGA 2861705 30 100.0 36 .............................. CTACTCCAATGAATTTAGCGGGGTCAAAGTGCTGTA 2861639 30 100.0 37 .............................. CCTGGTGTCCGACACCAGGCCCTGCTGGTGGGCGCTG 2861572 30 100.0 36 .............................. GCGTACCTGCAAGGGCCCTTATAAGCAGGAATTTAA 2861506 30 100.0 34 .............................. GGATTCAACGTAATCCATATCGGTTCATCATCAA 2861442 30 100.0 35 .............................. AAAAACTGCATACCCGTAAACCGTAAGTATCGGGC 2861377 30 100.0 36 .............................. ACGGTATAACCGTGGCAGGCATCATCCAAGAATCGG 2861311 30 100.0 37 .............................. TGGCTTTAGCCTAGTGGTAGTTCAAACCAGTTTTTCC 2861244 30 100.0 36 .............................. CTTTTCCACCACCCGCTCAAGAAATTCAGTGGCAAA 2861178 30 100.0 36 .............................. AGATTTCCAAGGTTTCAATCCAGCGATTCCCGCAAT 2861112 30 100.0 36 .............................. CTGTCTCCTGCCGTCTCAATCCGGTATGTTCTCCCT 2861046 30 100.0 35 .............................. CATTGTTGTTTATATTAAGAGTTTCGATAATTACT 2860981 30 100.0 36 .............................. CTGTCATATCTGAACCGTGGGACTTATGCGGCAGTG 2860915 30 100.0 35 .............................. TGGCAATTCGCTTCACAACGAAGAGAGGTATAAGC 2860850 30 100.0 37 .............................. CCAACATCCTTGCTGCCTTGGCGGTTGATTGAGATCC 2860783 30 100.0 35 .............................. TTCTGTAGGCTTTTTATCACTTCGTAACGGTCAAG 2860718 30 100.0 35 .............................. ATGTACAGGCAAGGCTGATTAGATTGAACTGAGGT 2860653 30 100.0 36 .............................. AAGGAGCGGCAGAGGCAAAGCGCGGAGCACACGCGC 2860587 30 100.0 36 .............................. AAGTCAATCGGGAAGAATTTAGAAAAATCATCCCTA 2860521 30 100.0 35 .............................. CCAAAAAGGCAAGTGGTAGCTGGCTCTGTCGTGGC 2860456 30 100.0 37 .............................. ATCTATCTTGTACTCATGCCCACATTTCAGGCATTTC 2860389 30 100.0 35 .............................. GCGAATGCCTCTTTGAGCCCTGTAATCTGTTTAAG 2860324 30 100.0 36 .............................. TTTCCTTAAGTGTGGGGCTGGAAACTCACAATTAAG 2860258 30 100.0 37 .............................. ATAAAGGCATTAAGCTTTACCCCTTTCTCTAATTTTT 2860191 30 100.0 37 .............................. TCAATGCCAGTCCTGCACCTTCCGGTGCCCATATCCA 2860124 30 100.0 37 .............................. ACCATTTGTATACTTCTTTCATTCCTTCTTCATCTAT 2860057 30 100.0 35 .............................. AATGCTGGTTCGATGAAACCGAAGCCCAGGTTTTG 2859992 30 100.0 36 .............................. ATGGTAGATACCGGGTATGAGGGGCTATACCCCACA 2859926 30 100.0 37 .............................. TATCCCCAAGGGTATGAAGCTACCCGAATTTAGTGAT 2859859 30 100.0 38 .............................. TTCTGTACGTTACTATGGCCCGCTGGACCATCATTTCA 2859791 30 100.0 36 .............................. TTGGAAAAAACTTGCGTTGCTGTTTAAATAATGATA 2859725 30 100.0 35 .............................. GTTTTTATCAAGTCTATAGGACTGTAGGTTTTTAT 2859660 30 100.0 37 .............................. TCATCAAAACCCATGCGGATACCCTCTTGCAACCTCA 2859593 30 100.0 38 .............................. TCTAGGCACACCAGTAAGTATAAACCGCTATCATCAAA 2859525 30 100.0 37 .............................. TGTTAAATCCCATATGGATGAAAAACAGGCTAACAAC 2859458 30 100.0 35 .............................. TCACTTAATTTAATAGTATTTTTATCTTCTTCTTT 2859393 30 100.0 37 .............................. ATGAATCAAAATGTATGGTTTGACCATCTTTATTTTC 2859326 30 100.0 37 .............................. TCTCATCTAAGGGAGGTGGTAGCATGAAAATTAGATT 2859259 30 100.0 35 .............................. ACAGGGTAAAAGTGATAACACGGGGATACAATGGG 2859194 30 100.0 36 .............................. TTCGTCCAACCTGCGAAGGCCTTAAAATCCCGCCAT 2859128 30 100.0 35 .............................. TGGATTAGGAGCAAACTTTGGAGTATCGTCCCAAG 2859063 30 100.0 35 .............................. AAAACATTCTGAACAATTGCCATTGCAATTATTCA 2858998 30 100.0 36 .............................. TTGTCGAAGGATGTCAAAAAATGGGGATGTATGGGA 2858932 30 100.0 34 .............................. ATAGTCAATAGGGCAAACATTCTCCTTCTCCTGT 2858868 30 100.0 36 .............................. TGGGCTACACCACCATTATTTATGGCGATGTAAAAA 2858802 30 100.0 37 .............................. CGGGATACCGCTTTCCTGCGCCCCCCGGTGACTGAGG 2858735 30 100.0 37 .............................. GTCCAAGAGGGGGGCCGCCGAAGGGCCGCCGATAGGG 2858668 30 100.0 36 .............................. CCTTTTCTTTCATCTCTATCCCCCCCTAAAATTCTT 2858602 30 100.0 36 .............................. CCATCGACTCCTTTCGCCTCGACACCTTTTTGTGTC 2858536 30 100.0 37 .............................. CCAGAATTTTTTGGGACTTCGGGGGCTTGTCTGACCG 2858469 30 100.0 34 .............................. CCTTCTTTTTTATAAAATTTATTTTTTTATTTTA 2858405 30 100.0 36 .............................. TTCGTAAGCAATTTCCATTGCACGCTGAACCGTGCT 2858339 30 100.0 36 .............................. TCCGAATCAATGTAGCACCCACAATCATCGCAGGTG 2858273 30 100.0 35 .............................. CAATCATTGCAAATCCAATTGCCGCACCAGTCACA 2858208 30 100.0 36 .............................. TACTATGTAATATATTATTACATAATATATTCGACA 2858142 30 100.0 35 .............................. AGGTATCCGGCAGGAGTGGTGACGATAGCCGCATA 2858077 30 100.0 37 .............................. TTAGTGCGGTTATAATTTCCCGGTATCCATCAAAAGG 2858010 30 100.0 37 .............................. CCGAGCACGGTGGCCCGGTCTCCCCGGGAGGTATCGG 2857943 30 100.0 35 .............................. AAAGAATATTTAATAATTATAGTAATAAGATTACA 2857878 30 100.0 36 .............................. TATGATATATCAAACGATAGTATATACTTATATTGA 2857812 30 100.0 36 .............................. ATAACCTGGGGTTCAATCTCAAAATACTCAAAAAAC 2857746 30 100.0 36 .............................. TTTTTTCCATGAAATTAATAATCTCTTTATTACTTG 2857680 30 100.0 35 .............................. TATCGTATTGTTTTAATGCTTGCTATTGCCTATAT 2857615 30 100.0 36 .............................. AAAACTACAATTATTCATATTTCTTCTCATACTAGA 2857549 30 100.0 36 .............................. TAAAGGAATTTGAGTGTAGAAATGGTGATTAGGTGG 2857483 30 100.0 35 .............................. ACGAGCTGTAGACAGCGAAACCGGGGAAACCCGGT 2857418 30 100.0 36 .............................. ATCTCTCTGATGCTTAGGATTTTCCACCCCTCCTTT 2857352 30 100.0 36 .............................. TCTCTAGTGCTTGTTCTAGTGTCACGCTTACCCCTC 2857286 30 100.0 38 .............................. GTCATCTCCCCTCCAATACTGACAAGGCCCTTTATCCA 2857218 30 100.0 36 .............................. TATAAACGGGTTGGAAATTGTAAACTAGGGGCGGTA 2857152 30 100.0 37 .............................. CCATTTGTTTCGTCTGTTATAGTTTTAACTAACATTT 2857085 30 100.0 35 .............................. GGCGAAAAAGAGGAACAAGCAATCGCACAGTTTGC 2857020 30 100.0 36 .............................. GATAGATGGGGAAGATACCATAAAAATAGTGTTGTA 2856954 30 100.0 36 .............................. CTGGCTAGACTGTTGTTTTGGCTTGGGCTTCCTTCC 2856888 30 100.0 37 .............................. TTGGATTTGATGCAGTTAAGATAAGCATTAAAACTTT 2856821 30 100.0 35 .............................. CGATAAATCCGTATGTTTACGGGTTTACGGGTATC 2856756 30 100.0 37 .............................. TACAAAAAACAACGTTGTGGTGGATACAAGGAAACCC 2856689 30 100.0 38 .............................. AGCTCTATGTGATATCCCCAGCCGTTCACCCATTTGGC 2856621 30 100.0 36 .............................. CTGCATCGTGGCTAGGGGTGCCGCTAATTACTATGG 2856555 30 100.0 36 .............................. TTGCTTGTCTTGTCTGTTCTGGCATTAGTTAATCAC 2856489 30 100.0 35 .............................. GCCAAAGCTTCAATCAACACCGATAGCCTTTTGGG 2856424 30 100.0 37 .............................. TAAATTCCGCAAGGTACTCTTTGCCAACCTCAACATA 2856357 30 100.0 36 .............................. GTAATTGACGATGCTCACCGCTGGAAGCTTATACTC 2856291 30 100.0 36 .............................. CCGGTTTGCTCAGCAGTGGGAAGCTCAGCCTCAAAG 2856225 30 100.0 35 .............................. CCAGATCAAGCAGGACGGTAGCAAAATTATGCCGC 2856160 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ======================================= ================== 186 30 100.0 36 GTTTGTGACCCGCGTATAGGGGATTGAAAC # Left flank : AAAGAATGATGATAGTGAAATAATCAATTCGGCTGCTACCATTCCCAGTGGAACGCTGAACTTGCACTGGCAGGAAATGGAGCGTTATTCAAGAAGGCAGGATCAGCGTATGATGCTGGGAGGGATGATGGGCATAATGGAATGTTCTGGAGAACTGAACCCATTTTTACCGTGGTTATTATTAGGGGAAGATATACACATAGGTAAAAATGCCAGTTTTGGACTGGGAAAATACAAATTAACCCTGATGTAAGGGGTATTACTTGGTGGAAGATAGCGCAAAACAATTTGTGTAAATTGATAATGAGAATAAAAAGGGATGAAAAATTGCATTACCATAAAACTTGTCGTCGACCGCTGATAGTGTCAAAAATCCTGCCCGGCGACGACAGGTAAAAATTCCGACAAAAGCCAATCTATTGCAATTTCACAAATAAGGGGTATAATAACTTCAAGACCAGACCAGTTAAAGAAAGCCCAGTATTTCTTTGTCGGCACGG # Right flank : CGGGGCAGAAGGTTATGGCTGGTGGCTATTTAGCCCCCCAATGGATTTGGAAGAACTCCTTGTAGCATGATAACATAAAAATAACAGGGGGTTGAAATTATGAAAAAGGCAAACAAGTATTCGGATGAACTTAAAGAAAAGATCATTCGCGAGTGTCAGGAAATAGATAATGTAGCGGTAGTAGCCCGCCGTTACGAGATATCACCCAACACCATACACACATGGGTTAAGAAATACCGAGAACGTGGTACTGCAAAAACCCTTAAAAAGAATGGATTTAAAGATATTAATACCATGGCAGAACAGCTAAAAAAAGTCAGTACCGAGAATGACCAGTTAAAACGATTAGTTGCCGAAAAAGAACTTGAATTATCAATCCTGCGGGAATTACGGGATAAAACAAACCCCAGGTAGCCGACAGAGCAGCCATCGCTGATAAGTGGATCCAGGAAGGCTATCCTAAAACTACCATCCTGCGCTTTGTCGGGTTAAATGTATCT # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTGTGACCCGCGTATAGGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [8,7] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-3.00,-4.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [46.7-58.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.14 Confidence: HIGH] # Array family : NA //