Array 1 5347-7349 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADNFQ010000051.1 Dorea longicatena strain D53t1_180928_G6 NODE_51_length_18102_cov_28.688, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ =================================== ================== 5347 32 100.0 34 ................................ TCTAATCTGTGCTTTTCCAGGAATTCCAAGATAG 5413 32 100.0 33 ................................ ACGACACGGGTGGAGGTAAAAAATATTACATAA 5478 32 100.0 34 ................................ TCAAAGGCTCCGACTGTACTTGTATCTCTTTCCG 5544 32 100.0 33 ................................ AGCAATATCGCAAGAGGTAGCTCAGATTACCTC 5609 32 100.0 35 ................................ TACACCTCCCATAAACGTAATGATCCCGACGTTGC 5676 32 100.0 34 ................................ GATAATATTGCGGACATTGACGGTGGATGGTTTG 5742 32 100.0 33 ................................ GGATATGCAAATGATATCACCCTTTACGTATAC 5807 32 100.0 33 ................................ GTGAAAGATCATGCATCAGAGATTACAGAAACG 5872 32 100.0 34 ................................ ATTGTATGGAGTTGCAAGACATTACAGAACTACA 5938 32 100.0 34 ................................ GTTCTTGGTCCTCTTCTTTTCATGCTTGTCCACC 6004 32 100.0 35 ................................ AGCTTATGCCTTACTTTTCTTTCCCGGTTCCATTG 6071 32 100.0 32 ................................ CGTGGGAAACCAGAACTTGCGGAATGGGCGTT 6135 32 100.0 33 ................................ GGATGTGAGTGTGAATACTGTGATGATGAAAAT 6200 32 100.0 35 ................................ AATGGCTGGATGATTCCTGTTCCCTCTTTCCATCC 6267 32 100.0 34 ................................ ATTAACTGGTGTGCATTTCCAAGGGGAGGGGCAT 6333 32 100.0 34 ................................ ATTAACTGGTGTGCATTTCCAAGGGGAGGGGCAT 6399 32 100.0 34 ................................ ATTAACTGGTGTGCATTTCCAAGGGGAGGGGCAT 6465 32 100.0 35 ................................ AGAAATGTTTGAAAATATCGCATACATTATGGCAC 6532 32 100.0 33 ................................ ACATCCGGAATGAACCGGCGGTACAAGCTGATC 6597 32 100.0 33 ................................ CATGTTGTGGTTCTGTTGGTAACGCCATGAGTG 6662 32 100.0 34 ................................ TTGGCACACACGATGAACTTAATCTGTCCTTTAT 6728 32 100.0 34 ................................ ACTGACTTAATCTCTATAATGTAAGGTATCTTTT 6794 32 96.9 33 ..........A..................... GATGATGAACTAAATTTGAAAGCATTACTTGAC 6859 32 96.9 34 ..........A..................... GTCATACACCACTTGCTCTGCAGCCTTTACGATC 6925 32 96.9 33 ........T....................... AACTATATCGTCTATTTACAGACAAAAGGTTTC 6990 32 96.9 33 ..........A..................... ATTCTATCATGTAACCCTGTAGGAAAAGAAAAC 7055 32 96.9 33 ..........A..................... GTAATGAATCCATTTTCCAGAAGTCTATAGCCG 7120 32 96.9 34 ..........A..................... ACTTGCGAGTTCAATGATTCAATCTTGGCAGATG 7186 32 96.9 34 ..........A..................... ATATCAGGTGATGTTGGGAAACAATTGGAAAACC 7252 32 96.9 34 ..........A..................... GTGAATGAAGCATCCATCAGAAACGGTAAGCTGA 7318 32 93.8 0 .....T....A..................... | ========== ====== ====== ====== ================================ =================================== ================== 31 32 99.0 34 GTCATCCTCCTTGTGAGGATGTGAGTTGAAAA # Left flank : AGACGAATATCCACCGTTCTTCTGGAAGTAGGTGATGGAATGCTGGTTTTGATTACATATGATGTAAATACCCAGACATCTGCTGGGAAAAGGCGATTAAGAAAAGTAGCAAAAGAATGTACAAACTATGGAACTCGTGTGCAAAATTCTGTATTTGAATGTCAAATGGATGCAACAAAATGCAGGCAGGTAAAACATATCTTAGAGGATATTATAGATAAAGACGTTGATAGTTTGCGGTTTTATTATCTAGGTGATAAGTATAAAAATAAGGTAGAACATATTGGCGCAAAACCTGGATTTGATGTTACGGATACTTTGATATTTTAGTGCGAATAATAAGCGCACAGAAATCTTCTTGGAGATTCGCACCGGAAAATGGTGTGCTTTTCCAGAAGAAAAGTAAATAGGAATTAGAAAAAATATAAATTTTTAACGTATTATATTCAAAGGGTATAATACGTGCAGTTTTAGACAGAGTGTTTTTGTTTAAAATTGCT # Right flank : AGAGAATGATGTAAAAATGTATGGTACTCAAGTATAGCCCTTTTTATGAGAAAAATAGTTCCAAGTAACGATATGAATTCAATTTATGTTATGCGAAAAAGGGGAGAATTGAAAGAATATAAGTTACAGTTTCTTAGCATTAAAAAAGGACTGCATTATTAGGGAGGAGTGCAGCCCTGAGGAAAAAGTTATGAAAAAGATTTAAAGTGTTTGTTCTTTTGAACAATTCCTAGTATAGAAGCGAATTGTGATAAAAGTGTGATGGAATTAGGAAGAAATTGTTAACAAATTAAAAACATAAAATAGAATACGATTGGATGCATCATAAACGGTGCCAATGTTGAAATCCAAAAGTCCGGGTGTTAGAATTACAACAGATACTATACATAGAAGATATATATAAATATCAAAGAACACAAGAAACCACACAGAACATACGAACAAACACCAAGGAGGAATACACCATGCGGATCCTAATCTACGGCGCCGGAGTCATCGGA # Questionable array : NO Score: 3.21 # Score Detail : 1:0, 2:0, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCATCCTCCTTGTGAGGATGTGAGTTGAAAA # Alternate repeat : GTCATCCTCCATGTGAGGATGTGAGTTGAAAA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:56.25%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-4.00,-4.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [71.7-70.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA //