Array 1 946580-942410 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP043638.1 Streptomyces sp. INR7 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ==================================================================================================================================================================================== ================== 946579 37 89.2 35 A.......T.T...........G.............. GGCCTGACCTACGGGGCCGCGAACCTGTACGGCTG 946507 37 83.8 35 .......CT.T.....G.....G.......A...... GTCTTACCGACGGCGGTTTGAAGCTCAGCGGCGAG 946435 37 75.7 180 .CA...A.......C.G..GTA.T............. GGCGCTACGCCAGAGGACAGGGCCCGCCTGCAGCTCGTCGCGGCCTCTTTCCGCGGGAACCGAGGTCGCAACGACCTGCCGGGCTGCGATGCTGACCACAATCTCACGTGTCGATCGTCTTTCGGGGACGGTCGAGGATCCAACATGACACGGACGGTGTCCTCAGCAGCCAGGTAATAG 946218 37 86.5 37 ..........T.T.C.T.....G.............. TTCGTCTACCCTGACGGCGGCGATCTCGTTACTCGCA 946144 37 83.8 36 ....T.....T...CTT.......T............ CACTACGCGGACGGCCTGATCAGCCCTGCTGGGCTG 946071 36 86.5 35 .............-..GT....G........T..... GCTGGCTCGCTCCGCGCAGCTCAGGGCAAGCGATC 946000 37 86.5 36 ............G...GC........T........C. TGCGCGTCAAGAACACCAACGGCTCGTCGATGACGG 945927 37 86.5 38 ....T..C..T.....G.....C.............. TACGCCGATGTGGTGCTTTGGGAGTCCTACATCTCCGA 945852 37 78.4 36 .........A....CGG..GAA.............G. AACAAGCTGAGCCACGATCTAGGCGGATTTCGGGAA G [945837] 945778 37 86.5 37 ...A..........CTG.....G.............. GGTCGGTGAGGACCGGCTTGCCGAGGATGGTGTCTGG 945703 36 83.8 37 A..A............G.A......-....C...... AACCCCTGGCCCTGGCACCGGACAAAGCCCGGGTCGG 945630 37 86.5 88 ..A.......T.....G.....G......G....... AGCGTCAAGGTGGGTAACGTCATCTACACCGTGGTTTAACAGTCGCCCTTCGGGCAGGCGTCCACGCCCGGTACGTGCTCGTTGTCCT 945505 37 83.8 22 .G........G.....G.....G........T.T... GCCGGCTCGCTCCGCGCAGCCC Deletion [945447] 945446 37 67.6 31 AG...AAGT.AT....GA.C........T........ GTCCTGCACGACTGGCTCGGTGCACGCGAGC 945378 37 64.9 35 .C.C.CAGT.G.GG..GC...A..............T TCCAGGACGTGGCTGCCACGAAGATCGACAGCGTG 945305 37 78.4 38 .......GT.T...G.G.A...G.....A........ CTGTACTCGTACTCGACCGGCGCCTGCCAGGACTGGGC 945230 37 83.8 37 .....A.....T..G.G.......T...........T GTCAGCGCCTTGAGCGCCAGGCGACGGCACGAGTCGT 945156 37 83.8 34 .........AT...C.G...T.G.............. ATCGCCGATCGGGCGGGCATCGGCCACGGCGGTA 945085 37 78.4 35 ....T.....T.T..AGT....G......G....... CTCCGGGTGTCGGGTCGTGCGGCGGGGCTGTGCGG 945013 37 89.2 36 ..........T.....G.....G..........A... CACAGCTCAACGAAGGCGGCGCGGACGGTCGCCACG 944940 33 64.9 24 AG..A...T.TA....G..G----..........G.. GTCGTCAGGTTCGACCGCGGCGCC Deletion [944884] 944883 37 89.2 35 .........AT.....G.....G.............. TTCGCGAGCGCGGCGGCCTGCCGCGCGGCCGGGAT 944811 37 89.2 31 ....T.....T....GG.................... ATTGAGTCGGTCATCTGGGCCAACGGCTCCG 944743 37 94.6 35 .C..............G.................... GCGATCAGGGTGGACGAGCACCACCGGACCTCGGC 944671 37 83.8 36 C.........T...GTG.....G.............. TACACACCCACGGTCACACTCGACGAGGGCAAAGGG 944598 37 86.5 38 T.....C.........G..G...G............. ATAGGGTGGCTCCGCCTTCTTGGCGCGGTGCGGCTCTG 944523 37 86.5 37 ........T.T.....G...G.....C.......... GCCGCGAAGCGGGCGACTGAGGTCGCCGCGCGGGCCG 944449 37 89.2 37 ..........T.T...G...............A.... GACTGCTCCGGCTTCGTCCAATACGTCATGCCGCGGG 944375 34 83.8 37 ........T.-T....G.....--............. ACCCCCGGGGAGTGGCAGGAATGGGCCGAACTCAGAG 944304 37 91.9 35 ........G.......G.....G.............. ATCGAGGGCAACGGCGTCGGCCAGCCCACCGGCTT G [944288] 944231 35 94.6 36 ...............--.................... CGCACTCCGACCTGGCCCGAGCGGACCTGCCGCGAC 944160 37 86.5 36 ....T.....T.....G........AG.......... GAGTACGGCGAGTGCGGGTGTGAGGACCCGGACGAG 944087 37 89.2 35 ........A.T.....G..G................. CAGACCGCGCGGGACGTGTTCCGTGCGCTGGAGCG 944015 37 89.2 35 ..........T.....G.....G.........A.... ACCAGAACCCTCGAGCCGCTCCGTTAGCGCGAGGA 943943 37 89.2 35 ...........T.C....A....T............. CTGCTGACGAGGCCCGCCTAGGGTGCGTACGCCGA 943871 37 86.5 37 ........T......TG..G..G.............. ACCCTGCTGCGCCTGGCTGAAGGCGGGGGAGTCGGAG 943797 37 83.8 34 ................G..G...T.........T.CG GTCAGGGCGACGCCGGACGTTCCGGCGCCGCCGA 943726 37 86.5 53 ....T.....T.T...G.....G.............. CTCATGGGGCCGTTGTAGGAGGAGTACACAACCGTGGCGGCGAGCAGGGCGGC 943636 36 86.5 37 .............-..G...T.G.............T GTTGGTGTAGGAGGCGCCAAGCTCCTGTACCTTGCGC 943563 37 100.0 35 ..................................... ATGGTTGGCATCACGAATGCTGGCGTCGGCCATAC 943491 37 86.5 35 .C..........T...GT..............C.... GACCTCGACTCCAAGCGTGGCGACACTGGCCCCGA 943419 35 86.5 35 ............T.C--..G................. GACGACACTCGCACCGTCGCCGACGTGGTCACCGT 943349 37 78.4 37 ........T.TTT...G....AG..........T... TTCGTTCACTATGACGGCGGCGATCCCATCACGTGCA TCA,G [943328,943338] 943271 37 75.7 29 ..........T...ATG...G...G.G....T...G. GGCGGAGCGTTCGCGGATCGGCATGAAGA 943205 37 81.1 36 ......T...T...C.C.....G.G.......A.... CTCCAGGAGGTGGCCGACACGAGGATCGACAGCATC 943132 37 89.2 37 ......T...T.....C..G................. CTCTACGTCAAGAACACGAACGGCAGCTCGATGACCC 943058 37 86.5 31 ...........T....GA..........TG....... GTCCTGCACGACTGGCTCGGTGCACGTGAGC 942990 37 67.6 34 .C.C.CAGT.A.GG..G....A...........G... ATCTACAAGGGGTTCATCCCCGTACTGGCCCTGC C [942973] 942917 37 81.1 37 .........A..T...GAAG................T GTCAAGGACGACTGGGGCGGGATAATGACCATGGTGA 942843 37 83.8 35 .......C..T...CTG.....G.............. AGCGTCTATGCGGCGGCCGTCGCCCGGGCGATAGT G [942814] 942770 36 86.5 64 .......C..T.....G.......-...........T TGCGCGAGGGGACGCCCCTTGAGCTCGGTCGCGTGTGGCGGGCGCCGTTCGGGACCGGAGAACC 942670 36 78.4 35 ..............GTGA......-......T...CA AGCCGCTCGCGCCCGCGGCGGCGACCTGCCAGGCC 942599 37 86.5 40 A........A......G.A.................A CGGACGCCGGCGGGCGTTCAGCACGTGGCGTCGCAGGGTG 942522 36 86.5 40 ........T.T.....G...-........G....... CGAATCCGCTCGGCGTAGTCGGCGGCGATGCCCGCGGTGG 942446 37 54.1 0 CGATT.TC.TT.GGGGG..T..G..........T... | ========== ====== ====== ====== ===================================== ==================================================================================================================================================================================== ================== 55 37 83.7 40 GTGGCGGTCGCCCTTCAGGACGACCGAGGATCGCAAC # Left flank : CCCCAGCACCTGCGCCGCCAACAGCGCACCCGCACCCTTGTGCGGAACACCGACCCTGCCCCCGAGACGTTCAGCCCGCTCGAGTAGCGCCACCTGCCACGCGCAGCTCCCCTTCCCCACGTCGTGCACGAGGGCGAGATACTCCGCAGAAGGCCCCATCCCGAATGCGTCTCCAAAGACACACGCGAGCGAAGCCGATCCCCGTAAGTGGTCCTGCAAGGTGTGCCGTAGGCCGGTCACCGTACTACGACTGTGAGCCCACAGTTCCTCTCTGTGACGGTCGCTATCGTCGCGGGGCTCAACCAGTGATCTCGACATGGTTCGACAGCCTACGAGGGGCCACTGACAATCCTGTTCATGCACATGAGGCTGGTGCTTCGGAACCTCAAGCACGCGCGAAACGCGCGACGTACTGCCAAGAACACGTAATTCGGAACTATTTGCGGTGCGGGGTCGCCCCCCTTGCTCGGTGCAGCGAGGCTGAATCCCACACGTCAGCT # Right flank : TCCGATGCAGACCTCACCCGCATGGGAGAGGCATTCCTGTGCGTGCCGGGAGGTCAGCCGCCCCGCACGTTGCTGCCAAAATCCGATGAGACCGATCTGGTGCCGTCAGTTGCGAGCACGATTCAAAGCGCTTTGGGTATGTCGAGTTCGCCTCGTCTCTTGAGACGCTGCCACTGATTCTGGAGGAGAGACGGCTGGAAGGGACGGCCGGAGTCCTGGGGATGGCGCAGTAGGTAGCCGTCGGTGGTGCCGTACTTTTCGGCGTACCACTCGATGGAGTTCTTGGTCCGTTGGGGCAGCGGGACGTCGCGGTACTCACCGAGCTTGCGGTGCTTTAGACGTCATCTCATTTGGTGAGCCTGCGGTAGCAGATGAGGGTGCAGGCGGTGCTGGTGAAGGCGAGGAAGTGGTCGGCTTTGCGTTCGTAGCGCCGGTGGAGGCGGCGGCAGCCGGCGAGCCAGGACATGGTGCGTTCGATGGTCCAGCGGTAGCGGCCCAGC # Questionable array : NO Score: 2.61 # Score Detail : 1:0, 2:3, 3:0, 4:0.19, 5:-1.5, 6:0.25, 7:-0.37, 8:1, 9:0.04, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGGCGGTCGCCCTTCAGGACGACCGAGGATCGCAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,6] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGGCGGTCGCCCTTCGGGACGACCGAGGATCGCAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.60,-9.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [106-110] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [33.3-31.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.41,5.24 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //