Array 1 771336-771498 **** Predicted by CRISPRDetect 2.4 *** >NZ_LT727813.1 Oceanobacillus sojae strain SK-2, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ================================== ================== 771336 32 100.0 33 ................................ ATGGATAAAATAGCACGTCAAGCACTTGGAAGG 771401 32 100.0 34 ................................ ATCAGCTGGCACATTCGGTGCTGTCAGCGTTAAA 771467 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ ================================== ================== 3 32 100.0 34 TTCGCATCCTATATGGGTGCGTGGATTGAAAT # Left flank : AATAATATCACGGTCACTTGTCGCCAAAGGATTAATAATGACATTGATAGAAACAACACCATCTATCTTATCTTTTAAGCTTTCTAATTCATTTTTGATTTTCTCTGCATTTACTTTTTTCTCTGCTTCACTGAAATTTTCACGATGATTCCATTGTACGATATGTTTTATCATGGCTTACAACTCCCCGTTTATTTTATAGTTAAAGTTTATCATAGACTTACTTCCCTTTACATAGATAACGTATTTATATATTTCTCTAATTTTCAGAATCATTTGATATGTTTTTTTAGAATGATAAAATATAAGTAAGGAATTTAAAATTAACATGGAGTGCTAACCTTAAGCGAACATAGATTACTATGAAGGTTAGCACTCCTTTTATAGCAAGGATTATGAAGAAATATTCCAATAATGAAAGGAAATAATTTCAAATTTTGATTAGGTTAGCACTTTTCTGGTCTTTAGGCCTTGCTGTATTAAGGTGTTTTATGTGTGCT # Right flank : TACTTCAACATCATCAATTGAGATTCGTTTTCGCTGTTCGCATCCTATAAAGGGGTTCGAAACCCAGCGCCTCCAATACAAAAAGACGAGGTGCCAAGTGTGGTATCTCGTCTTTTCGTGTTTGCGTTCCTGTTATTACTTTCTCCGCACAGCCATCCAAATCTCACTATACACATTATCAAGATTGCTATAATCCTCTACAAAAGAAATTTCAGGTGCTTTCACTAACTCATAATCCGAGGAAGGAAACCATTCAGCTGCTATTTTTGCCCATGTTTCCTGCATTGTTTCAGGGAATGGCCCTTGTGATGAAAAAATAACCCAGGTATAAGCAGGTACCTCCAGCACATCCAGCCCTCTAAAAGGACCCTCTTCATCTGTCAACACGCCAATCATATGGTTTAAATATCCTTCTTCTTGCGTTCTTCCTTCATCAAAATTATAAGAAGCATTAATCACCTGTCCAGGCTCTAAGTTAGCATGTTGACGCATTTTTGCTT # Questionable array : NO Score: 8.67 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TTCGCATCCTATATGGGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:58.82%AT] # Reference repeat match prediction: F [matched TTCGCATCTTATATGGATGCGTGGATTGAAAT with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-2.90,-1.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [61.7-60.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.78,0 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 2 781100-782186 **** Predicted by CRISPRDetect 2.4 *** >NZ_LT727813.1 Oceanobacillus sojae strain SK-2, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ =================================== ================== 781100 32 100.0 34 ................................ CCAATGGCTTTACCGTCCATTTCACTAGTAACGT 781166 32 100.0 34 ................................ CTTAAAATTGGTGGCGGACTTGCCGGGATGATAG 781232 32 100.0 34 ................................ TGTATCTCCATAGTAATTATAAGTATATCTTACA 781298 32 100.0 33 ................................ TGGAAGACAACTTTAAGGATTTATTTACACCAG 781363 32 100.0 33 ................................ TTTAGTTAACTCTAATACTCCTACACTTGCTAA 781428 32 100.0 33 ................................ TTTGATAATAGATTAGGCGGCAGCGGGAGTGAT 781493 32 100.0 34 ................................ GACAAATTCAATATTGAAAGAAAAACAATTCATA 781559 32 100.0 34 ................................ TCTAATACAAGAGCCAGCTTAGGATAATGTTCTA 781625 32 100.0 35 ................................ ATGAACGAACCAGTCAATATATGAATGATCATGAA 781692 32 100.0 33 ................................ TTTGTTGTAATAATCATCCATATTAGGAACATC 781757 32 100.0 35 ................................ TGTAGGTTCAGGTTCAGGGTCGGGGTCTGGCTTGT 781824 32 100.0 34 ................................ ATCAGACTATCCTGTTGCTATACAAGCAAATATT 781890 32 100.0 34 ................................ ATCAGACTATCCTGTTGCTATACAAGCAAATATT 781956 32 100.0 34 ................................ TGTGAATCGCACAAGAGATGATAACGGCGTACGG 782022 32 100.0 35 ................................ ATTTAAGATGCGTTTTAGATGGTCAATTAGCTTGT 782089 32 100.0 34 ................................ CGTATGACGCAGGATTATGGGATTGGCTTAGATA 782155 32 96.9 0 ........C....................... | ========== ====== ====== ====== ================================ =================================== ================== 17 32 99.8 34 TTCGCATCTTATATGGGTGCGTGGATTGAAAT # Left flank : TATTTTTAAACAAAATTTAAATAACACACTTAGCTTGCTTTGATTTAATTCTTCTATCCCTGCGCTGCGAAGAACTGCCTTACTTTAAATAGTAAGTAAATATATAGTGATATCTTATTTTCCAAGCATTAAATATGCTTTCTTATGCTATACAGATGTGTTAATGGAAATATAATTGGTTAGGTCGTTCAAGGTATGTAAGAGAGGTAATTGTTTATGATTATCATTTGTATTTATGGTAAAGTAGAACTATCCTCTATTGTTATGTAAAACTTATCATAATAAAGACGAATTTCTTATGAATAAATATTTCAAGCTAATTATTTTTTACAGGTGCTAACCTAAAGCGAACATGAATTACTAGGGAGGTTAGCACCTGCTAGTTTATAAGGGATTTATGAGGTTTCAAATAAAAATGAATCAAAATGCGGGAGGTTAGATTCAGGTTAGCACTTTATTGTTTATAAAAGCTTGCTGTATATAGTCTTATTATGTACGCT # Right flank : TACATCCTATATAACAACCACCAAAGCTCCCGGCCCAAGATAATATAATTCCATTAAAAATCCATCCTCATACAATAAACTATTAATGAGGATGGATTTAAAATTTTTATTCCTTCTCCCTAACCATAACGCAAAATCCGCTCTGCAGCCTTTCTCGCTCCAGCAATATTTCTCGAAACCGGTCCAATTTCCAGCTCAGCTAATGCACCAGCTACAAAAAGACCACTTTTCCATTCAAGAGATTTAGAAACAATAGGAAAACCACAAGGCGCACAAGGCAATTTCATTTGCTTTATTACTGGATCTAACCATTCCTTGCCTGGCATTGCAATTGCTGGCCCCGTTGCCAGCATAATAGAGCTCCCTTCCAGCTTTTCATCATTTTCCATAAAAAGCTGCATTGCTCCATCAGCCGCTGCTTTTATTTCCTGGATACAGCCTGTATGAATATCCAGCCTGCCCGTTCTTTCTTGCTTCAACAGCTTTAAATATAAATCTCT # Questionable array : NO Score: 9.25 # Score Detail : 1:0, 2:3, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TTCGCATCTTATATGGGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:59.38%AT] # Reference repeat match prediction: F [matched TTCGCATCTTATATGGATGCGTGGATTGAAAT with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-0.80,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [70.0-65.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.41,0 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 3 1002563-1002863 **** Predicted by CRISPRDetect 2.4 *** >NZ_LT727813.1 Oceanobacillus sojae strain SK-2, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 1002563 32 100.0 35 ................................ ATCCTCATCACCTATATCATCCACGAATGTTACAG 1002630 32 100.0 36 ................................ ACATATACAGCCTCATAGTACGTTTCTTCAATCGTC 1002698 32 100.0 35 ................................ CATTAATTGTTTATGATGAATTTTTGGCTATAGAA 1002765 32 100.0 35 ................................ CAGTCAGACATTTACCGTTGACAAAGCGTTATTTG 1002832 32 71.9 0 ..............A.ACAG.CA....A...A | ========== ====== ====== ====== ================================ ==================================== ================== 5 32 94.4 36 TTCGCATCCTATATGGGTGCGTGGATTGAAAT # Left flank : AGTAGTCCTGGCGCTTGTTATTATAGATTCCGTTTTGTATTCCTCCTGCTCCTCTCCATTTTTATTTGCTCTTGTCAAACGGACTTTTACATTTGGAAAACAAGAACTTTCTATATTCTATCGGAAAGTCATATTCTAGGTCAACCTTTTTCTTGCTTTCCGATTAGAATATTTTATGAAACTCCATCAGAAATGTTGCAGAAAATACACAAATGACTTTGCCGACGCAGGTTAGTATGACTAGAAGAATATTTGAAGAGGATTAGAACAGAGTGGTATAATTAAAAATATTAAGAAGGATTCAGGAAAATTTTTAGTTGGATGGATAAATTAGTGCTAACCTTAAGCGAACATAAATTACTAAGGAGGTTAGCACCTCAGTAAATACAAGGATTTAAAGAGTGCAGTTACAAAAAAACACCAAATTTTAAAATATGAAAAAAAGGTTAGCACTTTTTAGTAGTCAACACCTTAATGTATAAGGCCTTTCACTATGCACT # Right flank : ATTAGTAAAACACAAACAAAAGGGGGTGAAGAAGAGAAAAGTTTACTTTTCCCCTTCAATCTCCTGTATATCGTCCATACAAACTAAAATACATAACCACAACTCATTACCATTATAACCCACACCAAAAAGGAGCTTCCCCATGACAAAAATAATCTGGTTAAACGGAGCTTTTGGAGCAGGGAAAACACAAACAGCCTATGAACTCCATAGACGATTAGAAAATTCCTTCGTATATGATCCAGAAAATATCGGTTTCTTTTTAAATCAAAATTTACCCGGCGAAGTAAGGAAAAGAGACTTTCAAGATTATGACATGTGGAGAGAATTTAACCACAAAACAATAAAATATACTGCTGAAAACTATGAAGGAACAATTATTATTCCTATGACGATTACGGAGACATCTTATTTTGAAGAAATTACCGGAAGACTGGAATCTGAAGAAATCGAATTACATAAGTTTGTCTTATCTGCTTCCAAGGAAGTCATTAAACAAA # Questionable array : NO Score: 8.78 # Score Detail : 1:0, 2:3, 3:3, 4:0.72, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TTCGCATCCTATATGGGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:56.25%AT] # Reference repeat match prediction: F [matched TTCGCATCTTATATGGATGCGTGGATTGAAAT with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-2.90,-1.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [65.0-65.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.78,0 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //