Array 1 1928916-1925778 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP027806.1 Candidatus Cyclonatronum proteinivorum strain Omega chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 1928915 36 100.0 30 .................................... GGTAAAATCAAACCCCATTTTATGCGCTGC 1928849 36 100.0 30 .................................... ATTGTATTGTGTGGTGAACATTTTTAACCG 1928783 36 100.0 30 .................................... TTTTTTCAGCTTTGATTCATCAATCAATTT 1928717 36 100.0 30 .................................... GCCCTCCCCAGCATGTGCGGGGATGTCGAA 1928651 36 100.0 30 .................................... GTCCAAACCTGTGAATCCCGATTCCAGTAT 1928585 36 100.0 30 .................................... ATAGCCCAATTCCTGCTGTTCGCCAAAAAT 1928519 36 100.0 30 .................................... GCATCTTCGACCTGATCGAATATGCGGTTG 1928453 36 100.0 30 .................................... TTTGCGCGGGCTTGCTCCTCGCTGATAATT 1928387 36 100.0 30 .................................... TCAGCCCGGGGACTGGTGCCCTCAGCCCAT 1928321 36 100.0 30 .................................... GAGGATGTCTGCGTCCACAACACCACCTTC 1928255 36 100.0 30 .................................... TAAAACATCTGCGGGCTTTATCAATCCCTT 1928189 36 100.0 30 .................................... TAGTGCAGCCTGTTCATTAGCGCATTGTTG 1928123 36 100.0 30 .................................... GCTGAATCGAATTGCTTACTTTGACCGTAA 1928057 36 100.0 30 .................................... GACCAATGCCATGTCAACGCCGTTCATGCT 1927991 36 100.0 30 .................................... GTGGCCCGAACGCTTCAACGCTGAGTGGTA 1927925 36 100.0 30 .................................... TATTTGAAGCGCGTTAAGGCTTAATAGTTA 1927859 36 100.0 30 .................................... CGAAAGAAAGCGCGCCCGTCCTCGAGAATA 1927793 36 100.0 30 .................................... AAAGAGCCATCGTTGCACCGGCTGACGTTG 1927727 36 100.0 30 .................................... TTACAAGATTTCCCTGCTTCTCCCATGCTC 1927661 36 100.0 30 .................................... TGCGCATAACCTACACGACGGTCATACGTT 1927595 36 100.0 29 .................................... CTAACAGTGATATACATATACTAAGAAGT 1927530 36 100.0 30 .................................... CTGAAGTATGAGCAGGAAGACAAGCCGCTT 1927464 36 100.0 30 .................................... AAATAATCCCCTTACCCTTCTCGACCAAAT 1927398 36 100.0 30 .................................... AGTCCTGCGCTTATTAGCCTTTCCCGGTGC 1927332 36 100.0 30 .................................... TGGCGGCAATAGGCATCTACCAGATAGAAA 1927266 36 100.0 30 .................................... GTCCATCAGTCGTGAACGCATATTCATCGG 1927200 36 100.0 30 .................................... AGGTCATCAATTTGCTTCTCAATCTTAGAA 1927134 36 100.0 30 .................................... CGCTATTCCTGCACATGCCGGGGAGGGCGA 1927068 36 100.0 30 .................................... CATATCACGATATTAAATAACGGGCAGGGT 1927002 36 100.0 30 .................................... GCCTGGCGTGATTACAAGATTTCCCTGCTT 1926936 36 100.0 30 .................................... TTTCGTTATTTTCGTGTTATAAACGTGTTA 1926870 36 100.0 30 .................................... CAAGCCCACCATTTTGCGTCTGAGTTTGTG 1926804 36 100.0 30 .................................... AACGTCACAAATATGAGTGATATGTTCGCT 1926738 36 100.0 30 .................................... CGAGAGCCAAATAACCAAAGCAGGCCAAAC 1926672 36 100.0 30 .................................... GTTAAAGTATTTGCGCAATGCCATGTCAAC 1926606 36 100.0 30 .................................... AGGTCATCAATTTGCTTCTCAATCTTAGAA 1926540 36 100.0 30 .................................... CGCTATTCCTGCACATGCCGGGGAGGGCGA 1926474 36 100.0 30 .................................... TAGGAGTGACCGCGATAAATTGCTTTATGC 1926408 36 100.0 30 .................................... GCCGTAACGCTAACAGTCACATCAGCCCGC 1926342 36 100.0 30 .................................... ACGTACTCAATCGCTTCAGAAGCCGACCCG 1926276 36 100.0 30 .................................... TAAAATCTACCGAAACCTTCCCCGGCTCGA 1926210 36 100.0 30 .................................... CGAAAGAAAGCGCGCCCGTCCTCGAGAATA 1926144 36 100.0 30 .................................... TTTCCGAAGGGCTTGTTATGTACGACATCC 1926078 36 100.0 30 .................................... CTGTTACACTTGAGGGATATTTTTAAGCCG 1926012 36 100.0 30 .................................... ACACAAGAAGATAGATTGAAACAATCCGAA 1925946 36 100.0 30 .................................... TGTGGTTTTGTTCTCGCTCATTTTGATATG 1925880 36 97.2 30 ..........T......................... TCTGTGCAATCGTGGTCAGGCGGGCAGCCA 1925814 36 94.4 0 ..........T.......................T. | C [1925781] ========== ====== ====== ====== ==================================== ============================== ================== 48 36 99.8 30 AATATCTGAAATCCCAATCTCAGTTCAAATCACAGC # Left flank : GAAGACACCCGTCTGAGCTATCCCGAGCTTTAACGTAAATCCCAAAAACCCTAATTCACCCATGAGTTATTCACGATTAAACGCTTATGAAACCATGTGGCTCTTTGTAACCTTTGACCTTCCCGTAACAACCGATAAGTACATGAAAGCCGCGAACAAATTCCGGCAGAACCTGAAACACGATGGCTTTCAGCGCTTTCAGCTCTCGGTCTATGCCCGGCACTGCGGCAGCCGCGAAAGCGCAGAATCCCATATTGAAACCGTAAAAGACCTGGTGCCAAAAGAAGGCTTTGTGAGCATCATTACCCTTACCGATAAGCAATACGGACAGATTGTCAACATTTGGGGTGCAAAGGAAGAGCGCCTTCCGCCCCCCCCGCAGCAGCTCGAATTTTTCTAAAAAAGAAGACGCACATGCACATTCAGGAAAGATGATAGCTATTTTTTTAAACCAAAAAACGCCCCAACGCAATGGTACATAAGCCATTACGAAGGGGCGT # Right flank : CCCCCCCCCCTTTCACCTCACCGGTGGCGATACTGCGTAGCGGGTGCCGGTTGTGAGATCGATAGCATGCCGGCGGTCGCGGGTGATGATGATTTCGGTGATGCGGTCACTGCGGAAGTTTAAGTCGGCATCAGCGTTTGTTATGCGGCGCACGGTGCCGTCGGCGAGGTGCAGGCGGCGGGTTTCGGGGTCGGCGTAGAGGAGCATGGTGCGGAAGCCTTCTGCAAAAACGGGCTCGCCGCTCAGGCGCGTTACCGGAATTTCCGTACCGAGGGCATACACAAGGGCAGATTGCGATCCCCGGCTGCCGAGTAGTACGACGGGAATTTCGCTGCCGGCTTCGAGGCTGCCAAGTGCTTCTGCAGTCTGCATCATCCGCCACTGACTCCCGTCTTCGAGGGTGAGGATGGCGTTGTCAACGCGGGTTTCCTCCGAAAAAATAAAGCTGATGCGGTCCTGTGAAGTTGCCGTTTGCAGCGGGGATGTCAGCAACAAGAGGG # Questionable array : NO Score: 3.25 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : AATATCTGAAATCCCAATCTCAGTTCAAATCACAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.89%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-5.30,-1.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [33.3-58.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.68 Confidence: LOW] # Array family : NA // Array 2 4135781-4138069 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP027806.1 Candidatus Cyclonatronum proteinivorum strain Omega chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 4135781 30 100.0 37 .............................. CAGTCTATATCAAATACAGGAAAACAAGTGCGTGCTA 4135848 30 100.0 37 .............................. CTGAAGCTTGCCCTCACTCTGATCGAAGCTGACAATC 4135915 30 100.0 36 .............................. CCCTCCAGGTAAACCGTTCGTCGGTATAGTTGTCCT 4135981 30 100.0 38 .............................. GATCTCTGAGCGTTTCCACGGCGACCGCCATCAGGCCT 4136049 30 100.0 37 .............................. CGACCGCCATCAGGCGGTCAATGTCATACGAGCTCAA 4136116 30 100.0 36 .............................. CCGCGGCGCGAAGCTTCTTAGTTCCAGCTTAGGCGC 4136182 30 100.0 37 .............................. CGCTTGTATCTCTCTGCTTATCTCTGTAAGCATAGTA 4136249 30 100.0 36 .............................. TCTTAAGTCAGCATGAATTTCTCTCTCATTCTCAAC 4136315 30 100.0 37 .............................. TTTCTCAGCTGATTTGGTCGTGATGTCTTTGGCTACA 4136382 30 100.0 36 .............................. GTTACAAATTACGACTTACATAGTCGTAGTTGCTTA 4136448 30 100.0 36 .............................. TCAGGGCAGCCGTAGCTTTGAACAAGCGTTTGAATG 4136514 30 100.0 38 .............................. TGCTTCGGGTGGATACATGACATGGCTATCGTCAACCA 4136582 30 100.0 36 .............................. TGGATTTCACCCCATATAACATAGGGTATGCCTGCC 4136648 30 100.0 37 .............................. TTTGAGCTTTTTTCATGTGTATAGTACCTTATGTTAA 4136715 30 100.0 36 .............................. CGCTTCTAATCGGTCTCTTAACTCTGCAACCTTATA 4136781 30 100.0 36 .............................. ATTTGTTTTTTAACGGTGTTGATTGAGTCTTTTAGT 4136847 30 100.0 36 .............................. ACTTTTTCATAGTATAGTACTTTGAATGTTAGTAAT 4136913 30 100.0 36 .............................. TTGGGTTAATTTCGCCCCTAACAAACTGAATACTTT 4136979 30 100.0 36 .............................. TTGAAAAGAATAAACTTCTTTTATTCTATCGGTTGT 4137045 30 100.0 38 .............................. TCCCTTGCTGTTGTACCACTCAGTAAGTAAAAGAACTA 4137113 30 100.0 36 .............................. ATTCCGGTTGTTGGTTCTGGTTTTGGTTTGGGTGAA 4137179 30 100.0 36 .............................. GTTCATTGTCTTATCCTGTTTTGTTGTGAGTCAGGC 4137245 30 100.0 37 .............................. CCGCCTGCTTCTATTTCGGATTTTGCGCATTCGTGTG 4137312 30 100.0 36 .............................. GTCTCAACCCACTTCCAATAGGTTTCCCACGGGCTG 4137378 30 100.0 36 .............................. TCAGATATGACACTATACTTTGTGGGATTCACAAAA 4137444 30 100.0 36 .............................. ATTGTTTCTTCGTGTACTTCTTCATCTATTATTCCT 4137510 30 100.0 36 .............................. GAATAATGAGAGCGTTTTCAAAGTGATTTCTGTCAT 4137576 30 100.0 36 .............................. AGACTACAAAAGCTTTCATCCTACCGCTCCTTCTGC 4137642 30 96.7 38 .............................T GTAGCGTTAGTCAACTAGAAGCTTGCTTTCATTTATAC 4137710 30 96.7 37 .............................T GTCTTCAACCGCAAAACTTTATTACCCTTTCGGTTTA 4137777 30 100.0 36 .............................. ACAGATGTAAGAAATGCCGATGCACGTTTTTCGCCG 4137843 30 96.7 36 .............................T CCGCTTGTCTTGCGGATATGGCCGGTAACGTGTTCA 4137909 30 96.7 36 ............................T. CCGCCATGTGTGCGCCCGAGCGCACACTTTGTAAAG 4137975 30 90.0 35 .......C..................G.G. CAATAAGTGTCTGACTGTACCCAAACTTTGCGGTC 4138040 30 80.0 0 ......G.G......GC.......G...G. | ========== ====== ====== ====== ============================== ====================================== ================== 35 30 98.8 36 CTCTCAATCGTACCTATGTGGCATTGTGAC # Left flank : CATGCGATGTGCACCTACGCGAAAAGGGTTCGAAGATTTGGTTTCGGCGAAACGCTTGTTTTGGTTTCCGAAACCCGTAGCACGTCACGTAAGGACGCAATGCTTGCCCCCCAAAAGCCAACCGCCAACCGCCAACCGTCCAAATCCCGAATCCACAAATTTATTCCTTTTCCTAACACCTACCCGAAACCCTGTTTAAATGCTGCAAAGAAGGGGGGATCTGTCAGCCGGCAGTGTTTTGCGGCTGTTCGGGTGAAATCCTGTAAACGCCCCCTCGCCTGATGAAGGAGATGTGTCTGATTTTGTTAAGGATAGGATGATCTGTCAGCCGTTGTTTGGGATGGCTGCCTGTAAGCTTTGGAAATGCAGGCACTTGGTCTTGTTTTTGAGGATGAAGGGGAAGCGGCACCGGTGTCTGACAGATTTTACCCCCCGAGCGACCGGCCTTCATGCTTTGAATGCGGGCCGTAATGCGCTATATTGATATTGCGGAAGCACCC # Right flank : CCCGCCCCCGGTCGCCTGTATGTTTCTTGTAATTCTGCCCGCTCCATCGTAGCTGCGGGGCATTTGGTTCGCTTGTGCGGAGGTTGTTTTTCCGGAAAACGGGAAGCACGGTAACGGCAGACGTTTCCATGCGCCTGGGCTCCGTAGCCGGGGGCAACCATCATGGAAACCGAAACGGGGGTCAGTTTGACCGGTTCAGGCAAAGGGTCGGTTGCTTCTAAAGTGGAGCGCTGCTAAAGCAGCCTGCGGCAACAGTAGCGCCCGTGACCATTTTTGCCTGTCGTTAGGAAAATGGACCGTCTTAACGCCTGTTTAAACGCCCGTTAACGCCTCATTAACGGCCTGTTAAAAAAGGCATCCGTACCTTGTTCCTGCTATGGGTGCTACGTGCCCGTGCTGTCGCAAGTCAGTGGTACGCCTTTGCACGAACAGCCCGGCAATGCTTTCAAGTCCGAACGGCCCTCCGGGCACCGCATAGCGTGCTTGCTTTCCGGAGCTAT # Questionable array : NO Score: 3.20 # Score Detail : 1:0, 2:0, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTCTCAATCGTACCTATGTGGCATTGTGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-0.80,-2.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-11] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [46.7-36.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.68,0.37 Confidence: LOW] # Array family : NA //