Array 1 51935-52570 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_NRDA01000006.1 Aggregatibacter aphrophilus strain PN_444 NODE_6_length_160879_cov_76.4107, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence                  	Spacer_Sequence                    	Insertion/Deletion
==========	======	======	======	=================================	===================================	==================
     51935	    33	 100.0	    34	.................................	ACCCCTGACGCCCAGTCTTTGTTGACTACCGCAT 	
     52002	    33	  97.0	    34	................................C	TGTGAAGCAAATATTGTTTCCACTGTGGAAAGCA 	
     52069	    33	  97.0	    35	................................C	ATTGTTAAATCTGTCATGGTTTATCCTTAGTAGGC	
     52137	    33	 100.0	    34	.................................	ACCCCTGACGCCCAGTCTTTGTTGACTACCGCAT 	
     52204	    33	 100.0	    34	.................................	GACAAGCGACTAAATCCGCATAGCACTTCTGCAC 	
     52271	    33	 100.0	    34	.................................	CCGTCGGATATGAAAAATTTACTTGATATGATGA 	
     52338	    33	 100.0	    33	.................................	CCTATTAAAAATTTGAATGACTTAGAAAAGTCT  	
     52404	    33	  97.0	    34	................................C	AGGTGATGGCATATCCCTTGGCTTTGAGATAATC 	
     52471	    33	  97.0	    34	................................G	CTTTCAGGTGGTCAACGGTTTCTTGCGATAGTCC 	
     52538	    33	  93.9	     0	...............C................A	|                                  	
==========	======	======	======	=================================	===================================	==================
        10	    33	  98.2	    34	GCAGCCACCTTCGGGTGGCTGTGTGTTGAAACT	                                   	       

# Left flank :   ACATGAGAATACAAAATGCTGATGCTGATTACTTACGATATTTCGCTGGAAGACGCGGAAGGACAGGCAAGGCTGCGGCGCGTGGCGAAATTGTGTCTGGACTACGGCGTGCGTGTGCAGTATTCGGTGTTCGAATGCGACATCGCGCCCGACCAGTGGGTTGTTTTAAAAGACAAACTTTTGAAAACCTACAACCCCGAAACCGACAGCCTGCGCTTTTACCATCTGGGCAGCAAATGGCGGCGCAAAGTGGAACACCACGGCGCAAAACCGGCAGTGGATGTATTTAAAGACGTGCTTGTGATTTAGTTCGCTAACCTGTTGTTCTCATTAAAACCCTAATGGGATAGCGATCCTTATTTTCTTTAACAATTTGGATGAATTAATCTATTTGTATAACGACAATGTGGCCGTTATACTTACCAAACTCCTTATCATAAAATCAGTTAGCGAAATACAGTGTTTAATCGGCTGATTTTTCTTGCTTTTTTAGGTAGGGA
# Right flank :  ACTCATTTTTATTTTTAAACCTACCAAAAAGGCGGCAGCCGCCTTCGGGTGAGTATATATTTTGTCTTTACGAAAAATAAGTGGTGTATAAGTTTCAAGCCTTTCTGCAAAAACGTCTGGAAAATCCACCGCACTTTTCTTTCATAAAAATAAAAAGCTGAACCTCTTTTGAGATTCAGCTTTTCTTTTTGGGTTAGATCATTTTAACCGCTCTTTTTGTTGACCTATGCTGAAATATTGTTACATTTTCGGAATTTCAACGCCTGAAGAGAGTAGGTCTTGAATATCCGATTTCAATACATCAGCTTTTGGCCCGTAAATGGCTTGAATGCCTGTGCCTTTAACAATGAAACCCATTGCGCCTGCTTGTTTCCAAGCCGCTGCATCACCCACCAGCTCAGGGTTGTGAACGGTGATACGTAAACGGGTCATACAAGCATCCACCTCGGCAATATTGTTGCGTCCGCCGAGAAGATTGATGATTTGCACCACTTGCGCAC

# Questionable array : NO	 Score: 6.09
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.92,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GCAGCCACCTTCGGGTGGCTGTGTGTTGAAACT
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     R [5,8] Score: 0.37/0.37
# 	Reference repeat match prediction:         F [matched GCAGCCACCTTCGGGTGGCTGTGTGTTGAAACA with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  F [-5.30,-3.70] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      F [0-1] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [65.0-60.0]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [5.28,0.37   Confidence: HIGH] 

# Array family : I-C [Matched known repeat from this family],   
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