Array 1 86857-84143 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAINRG010000025.1 Arcanobacterium phocae strain OLH_59F3 A_phocae_8, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================== ================== 86856 29 100.0 32 ............................. GAAGAAGTATTCATCACTTCAATCAGCGCAGA 86795 29 100.0 32 ............................. GATCATTTCCACTAGCTCAAATGCGAATCTAC 86734 29 100.0 32 ............................. ACTGCTGATTCGGTAATCGGAGCCATGATTAC 86673 29 100.0 32 ............................. ACTTAGCTACTCCGGTTCCTGTAGGATCGCCT 86612 29 100.0 32 ............................. CTGACAGCAGACCCAGAGTTACGTTATGTAGG 86551 29 100.0 32 ............................. ATTCTGCAAGTGCCCTAGCGCGTTCGTTAGTT 86490 29 100.0 32 ............................. ATCATTGCGGGTGGAAGCCCGTGCCAAGATCT 86429 29 100.0 32 ............................. TTCAAGTTTTCCGGGGATTTCTACCGTATTAG 86368 29 100.0 31 ............................. GTCGTATGCGAAGGATAGCTGGGATAGGCGT 86308 29 100.0 32 ............................. GATCTTGTCGGAAATGAAATGAGCGCCGCCGA 86247 29 100.0 32 ............................. ACCTGTTGGAACTGTGGTCCCGGAGGGGACGC 86186 29 100.0 32 ............................. ATGAAAGACCTAGCCCGGCTTATCAACTATCA 86125 29 100.0 32 ............................. TTGTTACCAGGCGCCAAAGCATGATCAGCATC 86064 29 100.0 32 ............................. GAAAGGTCGAGTGCCGGTTTTTAAAACCAACC 86003 29 100.0 32 ............................. ATATCCCCGTCCTGAAATACCTGGCGCGGCTT 85942 29 100.0 32 ............................. TACATTCGGATCACTATAGATCTTCCGTTTTA 85881 29 100.0 32 ............................. ATAATTTCTTCTCACCGACCGCATGCCCCGGA 85820 29 100.0 32 ............................. TCGTCAGGGAATTATGGAGAAGCTACGCAAGG 85759 29 100.0 32 ............................. AATTCTCGGCTAAAGCTATGCACGGCGTTCTC 85698 29 96.6 32 ............................T CCGCGACCGTGTGGGTCCCAAAGCCATACGGG 85637 29 100.0 32 ............................. TAGAAGCGTGGAAATTCCGCCGGCAAGTGTGG 85576 29 100.0 32 ............................. CGTGCAAGATCCTCGCACACCGATTCCCGGGA 85515 29 100.0 32 ............................. GAATGGAAGTTCCATAGAGTGCCTTCGCCACT 85454 29 100.0 32 ............................. GAATGGAAGTTCCATAGAGTGCCTTCGCCACT 85393 29 96.6 32 ............................T TATGCCGGCCGGCGTCGCCTTCTATCTAGCAG 85332 29 100.0 32 ............................. GCTGATCCCTACAGCGACGAAACACTCGCTTT 85271 29 100.0 32 ............................. TTCATCGTTGAGAGTTCCCCAACCAACTTGCG 85210 29 100.0 32 ............................. GTCGCCGCAAGATGCATTACGTGCAACAGCGA 85149 29 96.6 32 ............................A AATCGATTTTAACCGGCGGGATCACAAGACCG 85088 29 100.0 32 ............................. TCACGGATCAGCGTCGGAGCCTCATCTTGTAA 85027 29 100.0 32 ............................. TTCCAGTCGGGGTTAGCTAGGAATGATTCAAG 84966 29 100.0 32 ............................. AGGGAAGATGCAGACTGCGCAAGGCGCGCAAA 84905 29 100.0 32 ............................. TGAAGACCAGGCACGCACTTGGAAGAAGCAAG 84844 29 100.0 32 ............................. GTAGCGACGTGTGCGCAAGACGCAGTGAACCT 84783 29 96.6 34 ............................A CGGTTTGTCCTTTCGGCACGCTGATAGTGAATGG 84720 29 100.0 32 ............................. ATCGAAAATCTGGCTAGACTCCTTACCACCGG 84659 29 100.0 32 ............................. GAACTCTGGCATTTTATGTTCGTCTAATTGTG 84598 29 96.6 32 ..................A.......... ATCACAACCTTACAACTACCGGCAACTGACGG 84537 29 100.0 32 ............................. GATAGTCGCCACCCTGACATTGGGCAGCGAAA 84476 29 100.0 32 ............................. GCTAGCTAGGAGAGTTCCTTTCGTTAATGGTT 84415 29 100.0 32 ............................. AAAAAAGACCACCAAACGGTGGCCTCAGTCTT 84354 29 100.0 32 ............................. TTCGGCGACTACCCCGCCGAGGGATGGGCGCT 84293 29 100.0 32 ............................. ATCCGGCGCGTTTACGGCAATATTCCATTACG 84232 29 100.0 32 ............................. AAGGTGATTTTGAAACCGGCTGGAAAGCTTGT 84171 29 96.6 0 ........................C.... | ========== ====== ====== ====== ============================= ================================== ================== 45 29 99.5 32 CTCTTCCCCGCACACGCGGGGGTATTTCC # Left flank : TAGACGCGATTTACGGAGGCAAATTCATAGCAAGCATATATTGGAAGACATGCTTGGCACGCTCATGGAGATCTTAGAACCACACCTGCCGAATCGTGATGATGATCGATTGATCAATGATAATGGTGAAGTTTCTGGGCACGTACAATACGGAAAAGATGATGAGTGATGTTTGCAGTCTTAACAATATCTGCAGTTCCCGAGCATCTTCATGGCTATGTAACCCGATTTCTCACTGAGGTTGAAAGTGGGGTTTACGTCGGAAATATTTCTCGGAACGTGCGTGAACGCCTATGGGAACGTGTGAGTAGTACGCTTGACGAAGGAACTTCTACTATGATTTATAGCGACCCGCGACAAGAACAAGGATTCTCGATGCTCACTGCAGGAAAAAATTCACGAAAAGTATTGGACTTAGACGGTCTAACCGTTGTGTCCATGCGTCCTGGACGTGGAGAATCCAAAATTCGAGATCGTTGAAAATAAAGGGTTTCGTTAGT # Right flank : AAAATTTGAAGGCGATTCAAAGATGGGCGCTCAAGTGATCGGAACGATCATGATCAAGGTAGCGCTTCTTATTGTCGCTATTCAAAATGTAGATCTAATTCTTAAAGCTATTAACGAAGCTGGCGAAACACTTATTAACGGGCTGAAAAAGTATGCAACAGTCATACAGGCTAACCCTGTCAATATCGGTGATCTTGATATGGATACTCTAGATATGATCGGCGCAATGATCATTCTATTCTTGCCCTGGCTGATTTCAATGCTTGGCGGCATCGTCGTAAAAATCGTTGTACTCTTGCGATTTGCTGAGATATACATACTTTCTGCTGGGGCAACTCTACCGTTAGCATTCTTGGGTCATACCGACACAAAATAAATTTCGATCGGATACCTCAAGAAGTATGCAACGGCCATGCTTCACGGTTTCACGATCATCCTTGTCCTGATCATCTTTGCCAAATTCCAAGGAGCCGGTACAGACCTAGGAGAAAACCCAACAG # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTCTTCCCCGCACACGCGGGGGTATTTCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [7,3] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-12.30,-13.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [56.7-56.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.78 Confidence: MEDIUM] # Array family : NA //