Array 1 1226405-1226857 		**** Predicted by CRISPRDetect 2.4 *** 
>NC_016943.1 Blastococcus saxobsidens DD2, complete sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence             	Spacer_Sequence                  	Insertion/Deletion
==========	======	======	======	============================	=================================	==================
   1226405	    28	 100.0	    33	............................	CGTGTACATCGGCCCGGACGAGCCCCACTGGGC	
   1226466	    28	 100.0	    33	............................	CACGTCGTCGGGCAACAACCACTCTGGACGGGA	
   1226527	    28	 100.0	    33	............................	CGCCACCGCCCGGTCCTGGGGCAGCGCGCCGAG	
   1226588	    28	 100.0	    33	............................	CGCGCGGCTGAACTCGTCAGCGGTGACCGCGGT	
   1226649	    28	 100.0	    33	............................	CACCCCGAAGCGCGGGCAGGACGGCTACCACGA	
   1226710	    27	  92.9	    33	.....-..T...................	CCGCTCACATACTGGGCCAGCAGGTCACGTGCC	
   1226770	    28	  96.4	    31	...T........................	TCTCGGGCGCCGCCGCCCCAGAGGACGACAG  	
   1226829	    28	  96.4	     0	.........................T..	|                                	G [1226846]
==========	======	======	======	============================	=================================	==================
         8	    28	  98.2	    33	GTGCTCCCCGCGTCCGCGGGGGTGAGCC	                                 	       

# Left flank :   GTCGATCCGGGTATTAAGCAAGACCAGACGCGCGGTCGTCGGATCGACGCCAAGGTATCGGTCACGCAACAACCCGACGTCGATCGCCTTGTCGACCCGCAGGCCCAGTGACCGCACCGCTGCGGCACCGGCAGCGACGGCAATGACCTGACCGATCAAGCCGGCGATCTCCGGCCGGGCGCCGACGAGAGCGACGAGGACTCCCGCAGCAGCCAGCACGAGACCGTTCTTGGTATCCAGGCTCGACGCCCGAGTGCGGTACGAGCCCTCCACGCGGACGAGCGCCGACTCTACGACGTCGAGCGACGGCACCGGATGCGGATCGATCCGCGGTGGCGTGGTCATGAGGCGAGCTGCTCGCGGAGCGAGATGGCCTGGCTGACCACTGCTTCGTGATGGTCCACGCGGCGACTGTAGGACCAGGGTGAGACGCTTTCGACTGGGCAGCACCGCCAGTGGTACCTCGTCGGCCAGATCAGGGGGCTCATGTCCATCACGCA
# Right flank :  CCCGCCGGCGCCGGTTTTCGGACAGGCGGTTCGGCGCCTGCGACGGCCGGCCGGCGGGGCGGTCGGCCGTGGCAGGGGCCCCGTGACGTCAGGGGCCCGTGGGAGTCACAGGCAGTTCGTGCCGGCGAGCTTGGCCTCCACGTCGTCCAGGACGATTCCCGCGCCGATCGGCCCGATCCCCAGCATCCACTCGTCGTCGTCGACCTCGAAGGCACAGTCGGGCACGGCCTCCAGGAAGTCCCACACGGCGGTGACGCTGCCCTTGGTGGTCGCCCCCGGGTCGCCGTAGGCGGTCGAGAACACGATGTCCGCGTCGGCCTGGTCGATGAGCTCCGGGCTGATGTAGACCATCGAGTACTCGTCGTAGGGCAGCTCGGGAAGGGTGAATCCGACGTCGGCGAGGATGCTGCCGGAGAAGGTCTCGGGGCCATAGATGCGCGTCTCGTCGGGGAGGAAGCGCACGATCGAGGCGCTCGCCCCGTCCGCGCCGAGAGCATCGC

# Questionable array : NO	 Score: 6.17
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTGCTCCCCGCGTCCGCGGGGGTGAGCC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     R [1,4] Score: 0.37/0.37
# 	Reference repeat match prediction:         F [matched GTGCTCCCCGCGTCAGCGGGGATGAGCC with 93% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  F [-13.00,-12.30] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      F [0-6] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: F [35.0-16.7]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [5.55,0.37   Confidence: HIGH] 

# Array family : I-E [Matched known repeat from this family],   
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