Array 1 198791-199090 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAEDXU010000007.1 Enterococcus sp. BWM-S5 contig7, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 198791 36 100.0 30 .................................... CGTACAACGCAAATCGCCAAGCGATCGCAC 198857 36 100.0 30 .................................... GTATCAACCGAGTATATGACGAGTTTGACA 198923 36 100.0 30 .................................... AATATACATAGTTTCCCCACCTAATCCGTT 198989 36 100.0 30 .................................... ATGGCAGGGAACCAGACCACAACAGCAACA 199055 36 94.4 0 ...............................G...T | ========== ====== ====== ====== ==================================== ============================== ================== 5 36 98.9 30 GTTTTAGAGCTATGCTGTTTTGAATGCTTCCAAAAC # Left flank : TAAAATTGCGCCCATATCGGCAGCTACCACCCCTTGATTGATCATTTTCGCTGTAAGTGTCGGGATATACAGATCACAGCCTGCTTGGATTAATAAGAAGACGATTGCTATAAGTGCTTTACTGATAGACATTCGTTTGATGATTTTTCCCATTGTCTTTCCTCCATCTTCTGATGCAGTAGTGAATCTTCTACATCCGTTTCTTTTTCATTTGATAAGGTACCTTACTCACGATAATATACAGGTACCTTCTGAAAAAGTCAAGTACCTTATTAAAAAAGATTCGGTACCTGTCTAAACAAAAGGGAAGAGGCTATCAAACTGTGAGACAGAAGAGGGAAGAGAAAAAAACTGAGGCCTCCCTTTTCTAACAAGGGACATGGTATAATAAGTAAGAGAGCTTTAAAAAAGTGAATAGTAAACAAGTATTCAAGACTGAAGTCTTGCTATGGACGAGTAGCGCGATTACGAAATTTTGGGGAAGTAAAATTTTCTGCGAG # Right flank : TGTTACAATGCCCCCGTTATCTAACAGGGGTTTTAGAGTTTTATTGTTGTGAATATACTCTTATTTTCAAGGAATACAAGATTGTATATTGAGGGAAAGAAACGAAAAAAATTGAGATATTTTTATATCAATTTACTAAGCGATAATTTGGAATCGTATTGATTTTCCTACAAAAGAAGAGTTGTGGAGTTCAATAACAGAATATGTTATACCTTACAATTGTTAGACGTACAAGTCTGATGATTTTTTTTGTTTTTAAATGGTAAGAGGATAGGAAATGAATAATTGCATGTTGGAAGTAAATAATGATTTATCTTTATTGGTGACGGAAGTAAAGTTATGTTATTTAATGTTCTGTACTGTTTACATGATGAAGAAATAGCATTCGTATTGAGAGTGGAATATGATACAATAATTAGGTAGTATTTTGCATAAAGTAGTTGAAAGAAGCAACAAAAAAAGCGCCGAGACAGCGCTACTTAAAAAGTTGATTACGGACA # Questionable array : NO Score: 6.01 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAGCTATGCTGTTTTGAATGCTTCCAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.89%AT] # Reference repeat match prediction: F [matched GTTTTAGAGCTATGCTGTTTTGAATGCTTCCAAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-2.20,-0.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [56.7-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : II-A [Matched known repeat from this family], // Array 2 205736-206300 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAEDXU010000007.1 Enterococcus sp. BWM-S5 contig7, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 205736 36 100.0 30 .................................... CTTGTAGTCTTGATAGTCTTCTAGATAAGT 205802 36 100.0 30 .................................... ACTCCGTTTGCGAGAAAGACATCTTCAATT 205868 36 100.0 30 .................................... ATTAGGTAGCGCAATTAATCGACCGCTTAA 205934 36 100.0 30 .................................... GCAAAATTAATAGTTTTTTTATCACCTGCT 206000 36 100.0 30 .................................... CAATGCAAACGGGTCTATGGTTTTTGATAC 206066 36 100.0 30 .................................... TGAAGTATTGTGTGTTGCTGGATTTATGCA 206132 36 100.0 30 .................................... GCTGACCTGAGTGCGCTCCTTGCTGTTGTT 206198 36 100.0 30 .................................... CTGCTTTATATTTCTATTATATCACACGTA 206264 36 88.9 0 ............................A....GTT | C [206290] ========== ====== ====== ====== ==================================== ============================== ================== 9 36 98.8 30 GTTTTAGAGCTATGCTGTTTTGAATGCTTCCAAAAC # Left flank : GATTGATAAGTTGACTGCCACAATTAGTGAATTGATTGGCTATGAGTTATTGGAGCATGAACTTGATTTGGAAGAGGATGAGATTACTGTTCTGGAATTGTTCAAGGCTTTGGGAATCAAGATAGAAACACGAAGTGATACGATTTTTGAAAAGCTCATTGAAATTATTCAGGTGTATAAGTATCTGTCGAAGAAGAGATTGCTTGTATTTGTTAATGTCTGTGCATATCTTACGAATGAGGAGCTTGCAGAATTGAGTGATTATATCTCGTTGTCTACTGTAGACGTGTTGTTTGTAGAACCAAGGAGAGTCGATACATTGCCGCAGTATGTTTTGGACGAGGACTATTTTTTACATGTAAATTAAATGGTATAATAGAGGTAGTAAATTGACAATTGAATAAATAAAAACTCTTAATAAAGAGGCGTTCAAGACTGAAGTCTTGCTATGGACGAGTAGCGCGATTACGAAATCTTGGGGAAGTAAAATTTTCTGCGAG # Right flank : TAAAGCATATGATTGTTGTTGCTAAGCCGGAAAGGTGGTATCTGAATCTAATGAAATCATTTACTTTCGTTATAAATAATACATCGTGGCAGCGTGCGGCCGCTCTTTTTGTTCGTATGAATGTGTTTGTGCTGGAAAGAAATATAGCAATCGAAGATGAGTTTGATGAGAATGATACAGATGGTACGACATATGCTGTCGCCTATAAAGACAATCTTCCTGTGGCAACTGCTAGATTTACACAGGTCAATGAGACTGCTGCGAAAATCACTCGGGTTGCAACGATGAAAGAATACAGAGGGTTTCATCTTGGCTCGAAGCTGATTCAACTAATGGAGGAGCATGCTGATTCTATGGGCGTGACGACGCTGGATATTCACTCGGAGTTAACGGCTGTTGAATTTTATAAGAAGTGTGGTTATGTGCTGTCTTCAGAAATTTATCTGGAGGACGGCGTTGAGTGTCAGACCTTGACCAAGCAATTGAAATAGAGTGTTGTG # Questionable array : NO Score: 6.20 # Score Detail : 1:0, 2:3, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAGCTATGCTGTTTTGAATGCTTCCAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.89%AT] # Reference repeat match prediction: F [matched GTTTTAGAGCTATGCTGTTTTGAATGCTTCCAAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-2.20,-0.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [55.0-65.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.27 Confidence: HIGH] # Array family : II-A [Matched known repeat from this family], // Array 1 7558-8047 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAEDXU010000009.1 Enterococcus sp. BWM-S5 contig9, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 7558 30 100.0 35 .............................. ACTTTAGAAGAAAACGAACTGCTAAAACAGGTATC 7623 30 100.0 36 .............................. TCATCAGTATTAAATTCACAGATTTCAGCTTCATAG 7689 30 100.0 36 .............................. ATCTTCTGCCAGCATATCAGTTTGAGATGCTAACCA 7755 30 100.0 37 .............................. TAATTATAATCGTTATAGTTATTGCCTGTTGCTGCAG 7822 30 96.7 35 .............T................ TGCTGTAAGTAACCTTTCCCTTGCGCTGATTCATC 7887 30 93.3 36 ...............G.A............ TCAGTACTCAACGTAGCGTAGTATACTGTTTTTCCG 7953 30 93.3 36 ...............G.............C TGGAAATGGGGCGAGGGAATCGGTAACACCGTAATC 8019 29 73.3 0 .C..........G..CCA......-.C..A | ========== ====== ====== ====== ============================== ===================================== ================== 8 30 94.6 36 GTTTTAATCTAAACAAAGTGTAATGTGAAT # Left flank : GTTTCAGCAGCAGAAAGAGTGAATGTATTTTGCCCGGTTTGATTCAAATGATGAAGCACACGCTCCATGATTTTTTCATCTGATTCATTTGGTTGATTGCTGACATTCCTGTAGTCTTGAATAAAGGCGTCCTGTTGTCTAATTACTTTTTCAAGCATGATCTAGTTCTCTCCGTTTCACTGATATTCTGTAATCTAACTATCTAAGATAACTTTCCTTATCATGGTAACTCAAATGAAAAAAACTGTCTAAAAATTGGTTTGTGGAAGTAATGGGTGAGGTGATAGATTGAGGAACAAAAGCTGTGTGATCTCCCAATGAAAAATCTGTCGACCATCAATAATGTAAAGAGCAGGGGAAATCGACAGATGACAAAAAGCTTGCTGTTATTGACTTTCACATATTTTGTTAGGTAAAATGAATGAAAAGGTCAGAAAAAGAAAGAGATCGACAGAAAGCGTACTATGAACCCATATATATCAAGATGTAAAATAGGGTGG # Right flank : AGTTGATCGATCACAGTCAAAATCAACGAATACAGACTTGCTCTCGGAAGGATGAATATAGATGTCTCAGCAGTCCCGAATGTTTTATATCATGAATTATCTAAGTATGCATCAGGAGGCAACTGCGCCTTTTCTGGCGGAAAAGCTAGAGGTTTCTGTTCGAACGATTTATCGGGATTTGGATAATTTATCCGGTCTGGGTTTTCCTGTCTATGCTCAAAATGGTCGGAATGGCGGTATTCGGTTATTGGAAAATCATCAAATACCCGCAACGTTTGTAACGGAAGAGGAGCAGGAGGTTCTTTTGTCCGGACTGGAAAATCTGACGGTAACAGAGTTCGGCGGTGCTGACGAGCTATCGGTGAAGCTGTCCTCTTTATTTAAGCGTTCCGCTGATTCATGGCTGGCTATCGATTATTCCAGCTGGCGCAAGTCAGAGGAAAAAGAATACATCGAGCTGCTGACAACTGCAAGAAAGCAGAAAAAATGTGTATTTCTTA # Questionable array : NO Score: 2.97 # Score Detail : 1:0, 2:0, 3:0, 4:0.73, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.98, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAATCTAAACAAAGTGTAATGTGAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:76.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-13] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [63.3-60.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA //