Array 1 8626-9236 **** Predicted by CRISPRDetect 2.4 *** >NZ_LAHL01000001.1 Domibacillus robiginosus strain WS 4628 DSM25058_1_trimmed_contig_1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =========================== ======================================= ================== 8626 27 100.0 37 ........................... GACTAAATAAAATCATAGACGATGCGCTGAAAGGAGA 8690 27 100.0 38 ........................... GTTAACAATCAAAGCTACTTTGGTTAATTCAACGCGCG 8755 27 100.0 37 ........................... TGCAGCGCAAGACACACGTCAAGGAGTCGGTCGAGCG 8819 27 100.0 38 ........................... GTCAACACCTGCTACTTTGGCGTTGGTTGCATTACTCG TT [8832] 8886 27 96.3 37 ....T...................... GGCAAATATTCAAGTCACACCAGCCGCACAGCAAGCC 8950 27 100.0 37 ........................... ACTTTTTCGCGTTTAAATATCGTATACACTCCCTTTG 9014 27 88.9 37 ...CC...........C.......... GAACAATTAAAGAAACTGTACATGTTACGCGATGCTG 9078 27 96.3 39 .....C..................... GTAGACTTCATTCGCGATGTCTTTGACAATTGGAACGTG 9144 27 100.0 39 ........................... TCAAAAAGTGGAGATATATCCAATGCTTGAAGAAGAACA 9210 27 96.3 0 ................C.......... | ========== ====== ====== ====== =========================== ======================================= ================== 10 27 97.8 38 TTTTATTTGAACTTAGTGGGATATAAA # Left flank : TATTATATGTGATACTTAAATCGATTTCTTGTTTTGTTTCCATGTTGCTCACCTCACCCGACTAATCATATCACTTAATTGAGCAGGAATGATAAAGGAATTTGTGTCAATTTAATCACTATTAAGCTATGAAAATAAAAAGCCTAAAAACCTTGCTATGACAGACTTTTCAAGCCCATAAATGGTATAATTTAAGAACAATAGTATAAGGTTTCTCAATGGTGGTCAGCAAAATCCCCTTAGAAGGGGGCTAGCGCTGCGACATCTGAATACTTAGGTTTAATGTATAATGGGTAGTATCTAAAAAATCTTTATAATTAAATTTATTTGCCGTAAATCGTTTTCGACCATAAATAGCACCTAACCCAATTACAACAAGGGATAGAGGCGATTTTCCCTGAACTTCTAAATTCCGAACCAACGATGTACGGTAAAACAGTCAGCCTTGTGTACATGTAAATCTTGTTATATAGCGATTTACATCGAGTAAAATTAAGGGG # Right flank : ATTATTAAAATTTTAGTTGTATGGAAGCTGTTTTGTATTTGTCCTTAGCGGAAAGTGATCATCAAGAGATGATCACTTTTTTATTTGTAATTCTTAGAAACTAATTGTAAAATTCAAGTAATCTTTAACTGAAATTGTAATATGGAGGTGGTTTTAGTGCGGTTAAAAATTGAAATTAAAGCAGACAAACTTCCAGTAGCTTATCGTTTTGGTCTTTTAAGTATGATTAAGGAAGCAGTCTCGGTTTCTGATTCTCAATATGCGGAACAGCTTTTCAACAGCCATAACAGGGATATGAAGCCTTTTGCTTACAGCAGTTATTTGAAAAATTTTCGGTTTGAAGGGGAAGATATTCTCCTAGATAGCTTTTCTATTATTATTTCATCCTCAGATCTTAATTTCATGATGATGCTCTATAATGGCTTGGTCAACCGGCGGAAATATCGTTATAAAACATACGAATGGGAGCTGGGGAAAATTCAAATGCTTCCCGAAAAAAC # Questionable array : NO Score: 6.15 # Score Detail : 1:0, 2:3, 3:0, 4:0.89, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TTTTATTTGAACTTAGTGGGATATAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:77.78%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [65.0-70.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA // Array 2 15995-16539 **** Predicted by CRISPRDetect 2.4 *** >NZ_LAHL01000001.1 Domibacillus robiginosus strain WS 4628 DSM25058_1_trimmed_contig_1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ===================================== ================== 15995 28 92.9 37 G...............G........... AGTATCGTATCCAGGCGGTTTAATATGGGCGCGAGTG 16060 28 100.0 37 ............................ ACTATGACAAGTAATACTGTACCGAGCGGAGTGGCGG 16125 28 100.0 36 ............................ AACGTAGGCGCGACGCGTGACTATGTAGATACGGAA 16189 28 100.0 37 ............................ GATGGAATGAATCCAAAAGTGCTTCAGGATAAACTAG 16254 28 96.4 37 ............A............... GAACGAATACGGGACGCCTGATAAAACAAGACCTCAA 16319 28 96.4 36 ............A............... CAATGAAAAATAATGCTGTTGCCCGCGTTTCTAAAG 16383 28 100.0 37 ............................ GCGAAAGAAAAATTACACCTGGGAGGTCATCGCATGG 16448 28 100.0 36 ............................ ATTGATGGCCTAGTTAGAATTGTTGATCTAGGCTCG 16512 28 89.3 0 ...................A......TC | ========== ====== ====== ====== ============================ ===================================== ================== 9 28 97.2 37 TTTTATTTGAACGTAGTGGGATATAAAG # Left flank : GGCAGAAGCTCAAATTTTACTAGATCAATATACAACCGAAAAAGACACACAAGAAAAAAGGAAAATAAAGAGACAGATCAGCCAGCTGATGGTGAATGTTTACGATACTCAGCTTAAAAAAGAACCTTCTTTGTTTTCAAGAAGCGGAATTCCGGCTGATTTTGGAGAGGTTGCTATTGCTGATTTTGAGTATTCATTTGAAAAAGGCCTGGATTTAACTAAGCCATTATCGGCATTTTGGTAAAAGGGGGCCAACGTTACTTATGGTTTTGTGAAAAACGACTGTGATTTATTTCCTTGATGGTATAATTAGGATATGAAGGACTTATTTACAGTAGATCGATTTTTTAAATGAATAACCTTAATCCCTTTCGGGGCAAGGGAGCAAAGCAGATTTTTTAGAAAGTTGAATTTCTTTACTCTCAATCTACGGCAAATCCAGAAAGCTTGTTGCAGTGGATTTGTTGCTGTGACTGAGTTTTCTAATTTAAAAATCAGGG # Right flank : CGCAGAATAAGATTGATCAGCTGCAGGAGGGTCCAGATTTTATTTTCCTCCATGATTTCATATTTTTGAGCAAAATCAATTTTTAAAGAGTACTATTCTCAAATCAATACTTTCACCCATTAATACCTTTCATTATAAACTTAATGAAAGGTGTTTTTTAATGTACTGCACTTTTTCATCTCATTAAATAGCGTTCGGAAATTAAAATTTTTAGACGATCTTCTTTATTTTAGATAAGTGGTTGAGTTCGTGCGAATATAGAGTCTAAAACTTAGTCTGAAATTAATGTCTTAAAAACAGCGAAATTAAAGATGTTTCATAGTGCAATATGGACATAGAGTAATACTAGAAGGGGGGTAGAATTAAAATGAAATCCTAAAAATTCATCGTAAAGAAGTTAAATACAAAAAGGGTCAACTAATGAAAAAGTAGAGACTAAATTCTGTTTCTAGTAACGGAATAAAAATGTTTAGGTTAAGAAAAGGCCGGTCTCATACTTG # Questionable array : NO Score: 6.12 # Score Detail : 1:0, 2:3, 3:0, 4:0.86, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TTTTATTTGAACGTAGTGGGATATAAAG # Alternate repeat : TTTTATTTGAACATAGTGGGATATAAAG # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:71.43%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [2-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [63.3-60.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA //