Array 1 870850-872078 **** Predicted by CRISPRDetect 2.4 *** >NZ_FSRI01000001.1 Salinivibrio sp. ES.052, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 870850 28 100.0 32 ............................ TTGCTTGGATACGGTGATTTGATCAGCGTGTC 870910 28 100.0 32 ............................ GTGAAAATCATTAATGTGACCACCATCACACA 870970 28 100.0 32 ............................ GTCAGAAACATCGCTTTCTGGCACGGTATTTG 871030 28 100.0 32 ............................ GTGCATTTTGCACCTCAGATCAACATTGAATC 871090 28 100.0 32 ............................ AGTCAGCTCAGCCATGGCGTCAGCCGCATAGA 871150 28 100.0 32 ............................ CGCCACGACCGGCACAATGTGGATCACATCAT 871210 28 100.0 32 ............................ AACAGCAGCAGTAATGCCTTGGTTCGCTTCCG 871270 28 100.0 32 ............................ ACTCAAGCGGCGCATAATCCATTGCGCCTGTT 871330 28 100.0 32 ............................ TGTTTAAATGACGCGCCTAACGCATCCGTTTG 871390 28 100.0 32 ............................ TTTTTTACCCATTATCGCTATCCGCTTGTCTT 871450 28 100.0 32 ............................ GACCTGCTCTAATGTCAGGCCAGCTGCCTTTC 871510 28 100.0 32 ............................ TGAAATACCTTAAAGTTTGGGAAGATCATAAA 871570 28 100.0 33 ............................ CCGCGTAAGGTAAAACTCGCGCTCTACGTTGCT 871631 28 100.0 32 ............................ ACTTATGCGGGTTGTCGAATTGGATCCAATGC 871691 28 100.0 32 ............................ GTCAGTATCACCACCATCAGAGCCGCCGTCGG 871751 28 100.0 32 ............................ TGTTTGTTGCCATCGCCCAGCCCCCACACAAG 871811 28 100.0 32 ............................ TTGTATGTTGGTGATTAGCTCTGATGCGGGTG 871871 28 100.0 32 ............................ CACAAACTAACAAAACGAAATGCCCGTGGATC 871931 28 100.0 32 ............................ TATCGCGTGATGTATCTAATAAACCATTTCGA 871991 28 100.0 32 ............................ TGCTCCTCTTCCCACTCGCTAAGCGGCTTACG 872051 28 96.4 0 ..........................C. | ========== ====== ====== ====== ============================ ================================= ================== 21 28 99.8 32 GTTCACTGCCGCACAGGCAGCTTAGAAA # Left flank : TTATCGCCATTTTTGGTCTTTTTTAGAGGATTTTATCTTGTATTGGGTCTTACAGTGACTGCGCATCACACCTCTTAAACGCAAAGATTGATGCTTGGTTTTTCGTCCGCGAGTCCGTGCCCGCCACACCTTAAAACTACGTGGTTTTAATTCACGCCGCATTAACGCAATCACATCGTCTTGGCGTAGGCCATAAAGTGTTTCAATCGCCTCAAACGGGGTCCTATCTTCCCACGCCATTTCAATGATCCGGTCTAAGTCACCCGGCTCAGTCAGTTGCATACGCTCCTCCTTGTATTAGAGCGATATGTACGTATAAGTCGAATCACGCGGATCAATAAATAAGAGTGGATGCCTTAACCCGTTATGACCCTTATTTTTTGTCTTGTAAAAATAACCAATAGATACAGTCATTTATGAAAGGCCCTTTTTAACAAGGGTAAAAGACCATTTTTATCCTAACGGCCTGTTGTCACTGGCGATTGTTACGTTATTCTATT # Right flank : ACTGAAAATAATTGTTTTTTGATGTCAGTTCATTGTTAGTGGGTCGTGGCATCGAGGGAGTAGGGGACGGTTCAAGGTCAATAAAAGCGTATGACTAGCAATGACCATACACGTCAATTTGATGCATGTTTGTAGCCAAAGTTAAGCTGGCAACCACACGCTTTTGCATAGCCTAGCAGGGTTTTAAGGGTTGGATTACTTTTCCCTTTTTCAAGTCGAGAAATATTGCCTTCTTTCGTCCCCATACGTTCTGCAACCTCTTGTTGAGTTAGCCCGGCCTGCTTACGCATACTGAGCAACATATCTATCAATTCAAACTCAGGCGTCAATTCATTGTATGCTTGTTTCACGTCTGGGTTTTGCAATGCTTTCGCTTTTAATGCCTGTAAGCTATTCACTTTTCACCTCTTTCATACGCCCTGTTGCCAATGCTAAGTCTTTCTTTGGTGTCTTTTGGCTTTTTTTCACAAATGCATGAAGGATATAGATGTTGGGGCCGT # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGCACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [63.3-60.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.65,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 881864-883871 **** Predicted by CRISPRDetect 2.4 *** >NZ_FSRI01000001.1 Salinivibrio sp. ES.052, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 881864 28 100.0 32 ............................ TTAACGCTTTTTGTTTGGACAAACAGCAACTC 881924 28 100.0 32 ............................ TGCTGCCGCACCTGCCAGTGAACCGCCTAAAT 881984 28 100.0 32 ............................ CTAAACAGCGTGAGCTCATGGAGCAATCACAG 882044 28 100.0 32 ............................ GTATTACCAAGGCCGCTTTGTTCGGCGATGAA 882104 28 100.0 32 ............................ TGTTTGGCAGAGTTGGATCCCATGTGATCGGT 882164 28 100.0 32 ............................ TTGGCGCGCGCTGCTTTGGCCGCTTGGTACAC 882224 28 100.0 32 ............................ ACTTTTTGTGCGTTGCCATCGCGGACGCCAGT 882284 28 100.0 32 ............................ ATTCCGCAGTTGTTCTGTTATGCCACTGATAC 882344 28 100.0 32 ............................ AACGAAGCCTTGGTTATCCCGCCTACTTACAA 882404 28 100.0 32 ............................ ACTATGACCACTATCGGTATTGCGGCGGTTGT 882464 28 100.0 32 ............................ ATGATTTCCGCCCCTGTTTCGCCCTCTGTTTC 882524 28 100.0 32 ............................ TACGGTATGCATAGGGCCAGACAGTGCCAATG 882584 28 100.0 32 ............................ TAACATCTTTGCCAACGACCAAACCAACACCA 882644 28 100.0 32 ............................ ATCAAGAGAGTTAACTCGGTCAAGCATTGCGC 882704 28 100.0 32 ............................ ATGAACATGGAAAGAATGGATGAAAGCAGGAT 882764 28 100.0 32 ............................ AAATAATTGCGACGTGGCACGCCGGAAAATTG 882824 28 100.0 32 ............................ AGCCTCACAGCCCCGCCATGCGGGGCTTTTTT 882884 28 100.0 32 ............................ TCCAGTGCGCAGTGATAGTGCGCGACTCCCAG 882944 28 100.0 32 ............................ GCCGCCACATCCCACGGTGTCGCTTTTTCAAA 883004 28 100.0 32 ............................ TGTGAGCTTTGCGCCGCAAATCCACATTGCGT 883064 28 100.0 32 ............................ TTAAAACCAAGGCTTGCAATTTCGTCTGACAT 883124 28 100.0 32 ............................ TGCATCAAATGTTGATTTTGGCGGCGCGTTCC 883184 28 100.0 32 ............................ TAAATAAGCCAGAATAAAAACTAACCAAAATA 883244 28 100.0 32 ............................ GCGCAAGAAAAGCGGCAACCACATGCTGGTCC 883304 28 100.0 32 ............................ GTGATCAGCGCCGCGTTCCAAGCAATCTGTGC 883364 28 100.0 32 ............................ GTAGCGTTTGGCGTCGCGTTTGCGATGCGGGG 883424 28 100.0 32 ............................ ATAGTGAATAGGCACTTGATATGTAATTGGTG 883484 28 100.0 32 ............................ TTGCTCGGATGTGTCGGTTGCTGAACTTTGGC 883544 28 100.0 32 ............................ TGATTCTTGAAGTAGTTAAACGTGCCGAACTG 883604 28 100.0 32 ............................ GCACTCAAGGCAATATTTCTCGCTGTGCGCGT 883664 28 100.0 32 ............................ GCGTCACCGGAACGCGCGCCGGAACGCTTTAC 883724 28 100.0 32 ............................ AACCAACGGCATCGGTAATACGCACGATGTTA 883784 28 100.0 32 ............................ GCACCAACACGGGTCGCTTTATCTCGCATGTT 883844 28 89.3 0 .........................GTG | ========== ====== ====== ====== ============================ ================================ ================== 34 28 99.7 32 GTTCACTGCCGCACAGGCAGCTTAGAAA # Left flank : TGAAAGGCTATGCCTACTTTAAACGCTGGAACTACAAATCGCCGCAGCGACTGTATAAAAACCTCGATCGGCGTGCGGCCGCGATTGCCAGCAAAAATGGTTACGATGAGGAGGAAGTAAAGCGTCGTTTGTTGGAAAACATTAAAACGGACGACAAACGCTGGTCACTGCCTTTTATTCAAGTGACCAGCCTGTCGAGCCAAAAACGAGCGGGGCAGCCAAATACCGAGTTCGCCCTGTATATCGAGCGGGAACTCACCAAACAGCCGGCCAATAATGGCCAACCATTCACCTGTTATGGGTTAAGCAGACGAGAGCCCGACCAGCAAAGTGCGGTGCCGTGTTTTTGAGGGGGAAACCCCTCTTTACCCCTTCTTTTTTGGCTCTTAAAAAATAAACAGAAAATACAGTCAGTTACAGCAGGTGCTTTTTAACAAGGGTAAAAGACGATTTTTATCCTAACAGCCTGTTGTCACTGACGATTGTTACGTTATTCTATA # Right flank : GACACAAGCTCGGTACGGTGTTGGATATATAAAAACTGTCAACGGGCACCTGTCACTGTTGGCGCTTATATCAACCGATGTAAATGCACCATACTAGTCTTGATGTTGTGACTTATTAAACAATGAATATGTTGTATATAGGTTGTAGTACAACATTAAAGTTGTTTGAGGGTGTGATGGTGTCACTAAAAAATATCGCGCGTGCATTGCAAGCGCGTCGCAAGTCACTTGGACTAGAGCAGTCTGACATGTACATGCGTATTGGCATGAAACAACAGCAGTACCAGCGAGTAGAGGCGGGGAGTGATGTCCGGCTATCGACTTTGCTGCGTGTGCTCGAAGGGCTCGACCTGACATTAACGCTTACGCCCAAAACGTCTCAGACGGTCGATGAGCAGGTAAACCTCGATCGTTATAAAGATGATGATAACGACGATCTCGACTTTTGGTTAGGGACGGAGCACAGCGATGACCAAAACCAGTGAAAAGGTTGAGGGACT # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGCACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [66.7-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 3 884782-886671 **** Predicted by CRISPRDetect 2.4 *** >NZ_FSRI01000001.1 Salinivibrio sp. ES.052, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 884782 28 96.4 32 .............T.............. TCGCCGTCTTGCTTGGCGTTAGGGATACCCTC 884842 28 96.4 32 .............T.............. AACAGGCTCTGGTATTGTTTTTGATTTCGTGT 884902 28 96.4 33 .............T.............. CGGGCAGCTCTTCGGGTAGTACGTTGAAGTAAC 884963 28 96.4 32 .............T.............. CAATGGAGAACACCAAGAACAGCAAGGCGATT 885023 28 96.4 32 .............T.............. AACACAAGGAAAGACAGCCCGACTGTTAGTAA 885083 28 96.4 32 .............T.............. GAAGCGCCTCAGCGGCCGCGATTTGTATAGCG 885143 28 96.4 32 .............T.............. TGCCTATCGCTGATACTCAGCAATGCCGCAAT 885203 28 96.4 32 .............T.............. TATTTCGTCAGATAAATCCTCAAACTGCCGCT 885263 28 96.4 32 .............T.............. TTGGTGACTCTTTTTTTTCTGGGGTGCAATGC 885323 28 96.4 32 .............T.............. ATCTCCTGCAAATACTGATTGGACGCAAATCA 885383 28 96.4 32 .............T.............. ACAAAAGAAGTGATTGCTCTGGCGAAAGACAT 885443 28 96.4 32 .............T.............. GTACGTCTGTTCATTCCATTCGCTGATGTTAT 885503 28 100.0 32 ............................ TTTCTCTGTTGGATGTGGGCGAACTTTTATTG 885563 28 100.0 32 ............................ TCTGTGGGATTTGGTCAAGTGGTGAAGAAAGG 885623 28 100.0 32 ............................ AGCCAAAGAGATCCGATCCGCCGCATTGAATT 885683 28 100.0 32 ............................ GTCAGCACGTAAGGGGTGGCGCTCCCCGGTAT 885743 28 100.0 32 ............................ GATATGCCATTAGTGCCACATAGATGCAGAAA 885803 28 100.0 32 ............................ TGGTTGATGGCTGGGTGTGCGACACGATCGTG 885863 28 100.0 32 ............................ ATAAACAAGAAGCTCAGGATTTTTAGAGCCAA 885923 28 100.0 32 ............................ TTAGCTAAAAATCGCTTCGTTGTATTTGTTGT 885983 28 100.0 32 ............................ ATTAATCGGCATTGCCAAGGCTTCCAGCGTCA 886043 28 100.0 33 ............................ TTTGCTGTTTACTGTTTGGAATCGAAGTTGCAT 886104 28 100.0 32 ............................ TGCGTTCTCGTCGGTGAGTTCGCGCAGTGCTG 886164 28 100.0 32 ............................ ACGCGATTGATAGCCATCGCCGCCGCTTTCGG 886224 28 100.0 32 ............................ GACGGCCAGACGCCACTGCGTGAGGCCGTATT 886284 28 100.0 32 ............................ TTAACACTCTGGATCAGCTCACCGAACATGAC 886344 28 100.0 32 ............................ ATACACGGCGAGGACGTCAGTGAGCGCAGTGG 886404 28 96.4 32 .............T.............. AAAACGTGGCATTGCGTAGCAAATTCATCGCG 886464 28 96.4 32 .............T.............. CTTCTCTTACGTTCGATACGCGTATCCAGCGT 886524 28 96.4 32 .............T.............. TGAACATGGCGATCTTTGAGCTGCTTGGACTT 886584 28 100.0 32 ............................ ACTGTGTGAACCTACTACTGTGCCCCGTGAGA 886644 27 78.6 0 .............T.....A.-G...TG | C [886668] ========== ====== ====== ====== ============================ ================================= ================== 32 28 97.6 32 GTTCACTGCCGCACAGGCAGCTTAGAAA # Left flank : GTTATAAAGATGATGATAACGACGATCTCGACTTTTGGTTAGGGACGGAGCACAGCGATGACCAAAACCAGTGAAAAGGTTGAGGGACTAAACATTCAACTGCATGGCGTTGACGTAGCGATTGTCACCCACTATGCGGGTGGGAAGAATATTCTCACGTTCAACCCAGCGTTTATCGCCACCTCTCAGCATGAGCGTTTAACCTTTTCGTTGAGGCAACGTCGCGATCCGCAATACTTACGCACACCACAAATTCGCACGGACAAACTGCCGCCAGTGCTCTCCAACTTGCTCCCTGAAGGCGGATTAAGAGATGTCGTGTCAAAGGCGTTATCCAGCCAAACCGGGCGCTAAATCGGCGCCTTCTTACCCTTATTTTTTGGCTGTTTAAAAATAAACAATAAATACAGCTAGTTACGGAATCCCCTTTTTAACAAGGGTAAAAGGCCATTTTTATCCTAACAGCCTGTTGTCACTGACGATTATTAAGTTATTCTATT # Right flank : GACACAAGCCCCAGCACTATGTTGGAGAGGGGACATAGCCAACGGGCGCGCAGTCCGCTTGGCTAATAGATGGTTGACATCATACTGGCGCTTGTCCGACCTACGTGAACTTTAACGTCGGTGGTGCCATTGGCGATGCTGCCTGTCTGGCTTTTTCATTAAAATGACTAGATTAATGACTCTCTGAGTCACTTAACTTTATGGTTATACATTAATCGTTGCGTTTATTTCTATTGAGTAATCAAAAACTAATTGATATCGAGACTTTTCCTGTCCAGCTTTTTTTAATTGATGGCGAGAATCTATTCTACGATCAAACGGTAGCGGCATTTTGGTTGATGTTGTCTGTTGTTGAGTGGCAGGAGTTGGGTATGAATATCAATAACACCATGAAGTTAGTGTTCTTTATTATTGGTGCAGGGATTGTTGTTAGTTTTATAACTATTATTCAACTCAACGGCCTGATGAATAAAGTCGATGAAATGGCTCAGGTGCGATAT # Questionable array : NO Score: 5.90 # Score Detail : 1:0, 2:3, 3:0, 4:0.88, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.76, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCACAGGCAGCTTAGAAA # Alternate repeat : GTTCACTGCCGCATAGGCAGCTTAGAAA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGCACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [68.3-38.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //