Array 1 3357-3850 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_BLAQ01000049.1 Ligilactobacillus agilis strain SN4111 sequence049, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence                	Spacer_Sequence                       	Insertion/Deletion
==========	======	======	======	===============================	======================================	==================
      3357	    31	 100.0	    36	...............................	TGGAAGTTTGCATTAGGCGCTTTAACCGCCTTAAAA  	
      3424	    31	 100.0	    34	...............................	TAGCAATAGCTCCACCTTCAACTTTTTCTAGATA    	
      3489	    31	 100.0	    35	...............................	ATTTTGATAAGCTTTATTTCACCACCGACTTTACC   	
      3555	    31	 100.0	    35	...............................	ACGTTTCCGTGATTGCCGAAGCAGAAGATTTACAA   	
      3621	    31	 100.0	    38	...............................	AAGCACCAAATGTAGTAGCAGATACTTCATGACCAGAG	
      3690	    31	 100.0	    34	...............................	GAGGCAAGGCTGCAATCTTTGCTGATTGCGTAGT    	
      3755	    31	  93.5	    34	.............................TA	AAATCGCGCACAGCTGTTGCGCTAGAACAATCAA    	
      3820	    31	  90.3	     0	..T..............T...........T.	|                                     	
==========	======	======	======	===============================	======================================	==================
         8	    31	  98.0	    35	GAATCTATTTAACTTAAGAGGAATGTAAACT	                                      	       

# Left flank :   TTATTTTTGTGAAATTGTGCATACCAAAACTAAGACGTCTGAGTAGCTTTATTTTATGGTTGATTTCTTCAATGGGGATATTTGAGTATTTGGCTAATTTAGGATTAGCGGCATTCAAAACGTGGATTAGGTTTTTATCCGTTGTTAAGTAGGGTATTTAAGGTTTGAATTAAGTAATTATTGTCGATGTTCTTAACGTTTTTAGTGTAAGCATCATCATGATTCTTAGTTCACTGGACTTTTTCTTATAAGAAAATTTAGCTGCAAAATTGTTGTGGTGAAGCGCATTTTTACTAGTGACATTTTAGTATAGAGCGCTAGTATCTGTCGATCTAAGATAAGGTGAAATAGTGCTAGTATCGACAGACAATAAAAAGGTTGATATTATAGGCCTTGAAAGAATTTAGGGAAAAAAGTAATATATAGTTGAGAGTGAGATTAGATGATAGACAGAATATATGTGAAAACTAGTTGATAGTACAGGATTTTGGGAGTGCAGT
# Right flank :  TAACCAAGCAGGAGAAGGAGCAAAGAATAGTTGAGCTCCAGCAAGGTGATTTAGATTTAAGAAAAGAACTGGATGCTTATTATGATCAAGCGTTAGCTTATATTAAAAGTCACCTAGAAGCATTTTATCTGCACTATGCAGAAGAAGACGGCCTATCTATTTCTCAAGTTACACAAAATATTAGTCAATGGGATAAGCGGCAATGGAAAGAAGCTATTGATGAGTTAGATGTTTCCGGTTGGTTGCCTGAAAGTAAGCAACGAGCAGAAATCTTAGGTAATACAGCCGGTTTAAATCTAGGTAATTTAATCTCAGCTATTGCAGGACTGGGCATCATCGCCTGGTTAGATAAAAGCATTCAACGCACTCAATCAAAAGCTAAACAAATAGCAGTTGATGAGAGGCGTTTTTTACGTTCGAACACTTTGGCTACCAAGAGAACAGATAAGAACAAGCAAGTTTTACCAGCTTTATCTAGTAACATCTGGCTAGAAGGTGAC

# Questionable array : NO	 Score: 3.16
# 	Score Detail : 1:0, 2:0, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GAATCTATTTAACTTAAGAGGAATGTAAACT
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:74.19%AT]
# 	Reference repeat match prediction:         NA 
# 	Secondary Structural analysis prediction:  NA [0.00,0.00] Score: 0/0.37
# 	Array degeneracy analysis prediction:      F [0-5] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [65.0-58.3]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [0.41,0   Confidence: MEDIUM] 

# Array family : NA
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