Array 1 1946856-1945215 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP084020.1 Bifidobacterium longum subsp. longum strain NBRC 114494 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================= ================== 1946855 36 100.0 28 .................................... TGAATCGCCAAGCCCATTGCATAAGAGC 1946791 36 100.0 28 .................................... TCCACCGACGTGATGGACAACTACACGA 1946727 36 100.0 28 .................................... GGGCGCACTTACATACCACCGGAGGTGG 1946663 36 100.0 28 .................................... TGCAGCAGCTTATCAGTGAAGGCTACGT 1946599 36 100.0 28 .................................... CGGTGAACGTGCATGTTGCGGAATGTTC 1946535 36 100.0 28 .................................... TCGTGTTCGGCGCTTCGGCACGTACAGA 1946471 36 100.0 29 .................................... GAACCTGTTGGCCTGGTCCCAGTCGCTCG 1946406 36 100.0 28 .................................... AGCGTGAACGCAAGGCCATCGCATATGT 1946342 36 100.0 28 .................................... CAGTGTTGCCGCTTTTTCGGGGGTGTCG 1946278 36 100.0 28 .................................... GTAAAGGGTGGCGTTTTGTCGAAGTCAC 1946214 36 100.0 28 .................................... GTCGTGTCGGTATCACCGTCACCGTCAC 1946150 36 100.0 28 .................................... GGTCAAGTAGGGTCATGCGGGGTCAAGT 1946086 36 100.0 28 .................................... GGTTGGTTCGATGATGCAACACCTATAC 1946022 36 100.0 28 .................................... TTTTCTCCAGCACACGGACGTAATCGGC 1945958 36 100.0 29 .................................... CCAAGTGTGGGCCGAACTCAACAACTAAG 1945893 36 100.0 29 .................................... CGCCTCGCCGCCGCACGAGAACGAGTCAA 1945828 36 100.0 28 .................................... TATGGTGTAGCCAACAACAAAAACAAAC 1945764 36 100.0 29 .................................... CCCTTGCGCGTACTGTGCTTGTAGGTGGC 1945699 36 100.0 28 .................................... TATGGTGTAGCCAACAACAAAAACAAAC 1945635 36 100.0 29 .................................... TGTTGAGGGGAACCGTATCAAACCTGATT 1945570 36 100.0 28 .................................... TGGTTTCCGTGCCGCATTGGTCGCAGTA 1945506 36 100.0 28 .................................... TAGAAGTGCAGATTCCGTTCCTGCAAAC 1945442 36 100.0 28 .................................... AGGACGTGCAACGCAAGTATTTCAAGAT 1945378 36 100.0 28 .................................... TCGTCGATGTGTTCCAAGAGGTTTGGTG 1945314 36 100.0 28 .................................... TATTGTTCGGGTGCGATGGTGATGATCA 1945250 36 86.1 0 ..............................TTG.AT | ========== ====== ====== ====== ==================================== ============================= ================== 26 36 99.5 28 CAAGCTTATCAAGAAGGGTGAATGCTAATTCCCAGC # Left flank : ATTCAACGGTTCCGGTTTGACTATACCGAGCTCATTGAATGATTTTGCGCAGCAATTTGGTTTATATTGCGAAGGCAAAATCGACAGGTTGCAGGTTCCCGAATATGTAGGCGAGTCATGAAACGCGATGAGGACAGTGGCGGCATGTGGTGCTTGGTGATGTTTGATTTGCCGGTCAAGACAAAACGGCAACGGCATGCTGCAACTGTCTTTAGAAATATGTTGCTCGACATGGGATATGGAATGGTGCAGTATTCCGTATATGTGCGGTATACGCCTACGCAATCGGGTAATAGGGCGACGGTCAAAATGATTAAAGACAATCTGCCAGCTAATGGCTTAGTTAGAATTTTGCATATTAGCGATCATCAGTGGTCCACGGCGGCCCGATTTTCTTCTGGAAAACGTGAGATTGAGGAAGAAACGCCTGACTTTCTCACGCTTTTTTGAACGTAGGAGAGTCTGAAAAGATTGAAAAATAGCCCTTCTTGATAGGCTAT # Right flank : GCTGGAATGCTTGGGTTGATTTGGCTGATTTAGCTGTGATGGCCGCTGCGGGAATGGCCCTTGCGCGGTTGGCGGCAGAGGTTGCGGCGCGGATTGCGGCACTGATTGTTGTGCCAATTGCGTCTGCGGTGAAAAATATGGCGACGGCTGTGTCTGACTGTTTATCGGCGGATGTTCCGGCTCAGGTTGTGGCTGGAATGGAGAATATTGCGGTTGCGCCATTGTATGCTCCTGCCCCTTCATTGCCATTTCATTGGCGCATGGCGAGGGCTGAAAACCAAGATGATGAATCCTGCATGAGTTATCCGTGATTCCTGTACGTTGGTACAGCGCGGAAGGTTGAGCAGCCGACATATGCAGGCTTGTCGGTTCAACTGAATATCTTTAAACTATGACTTCCAATACCCTTCGTATGTCAACCATGTTCCTGCGCACCCTGCGCGAGGACCCCGCTGATGCCGATGTCGATTCAGCCAAGCTGCTGCAGCGCGCCGGCTATA # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CAAGCTTATCAAGAAGGGTGAATGCTAATTCCCAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.56%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-0.30,-1.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [43.3-63.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,1.05 Confidence: HIGH] # Array family : NA //