Array 1 16309-11474 **** Predicted by CRISPRDetect 2.4 *** >NZ_UFJP01000013.1 Acinetobacter baumannii strain 4300STDY7045743, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =============================== ================== 16308 30 93.3 30 ............................AC TTATAACTAATGATTTTGCCTCATCTCTTT 16248 30 100.0 30 .............................. TGCGGTCCACGACTGGTTCAGCCAATTGGA 16188 30 93.3 30 ............................AA ATCAGACCATTTCCCAGAAATTGGAAGTCT 16128 30 93.3 30 ............................AC ATATCAAGGCGCAAGTGACACAGATGGATC 16068 30 93.3 30 ............................AG AGGGTTATGTTCTTTTACCAAGAGTACCAA 16008 30 93.3 30 ............................AA TGGAAGAACAAATCAAAGGCGCAGAACCTT 15948 30 100.0 30 .............................. ACCACCTGCTTTGTTCCAAACTAGGAATTG 15888 30 93.3 30 ............................AC TGTTGAACGGTTATTGTCATCGATCATCAA 15828 30 100.0 30 .............................. GTACACTTTCGCCAGCAGCAAGAATTCCAA 15768 30 96.7 31 .............................G TACAAGGTCAAGTTCTATACCTATTTGTATT 15707 30 93.3 30 ............................CA ATGAAAAAGCTAAATATGCTCTTGTGTTTT 15647 30 93.3 31 ............................AA ACAAGACTTGTACCAAACTGACATACCGAAT 15586 30 93.3 31 ............................CA AACAACCCAAGCCCTAGCGCCTAATAAGCCT 15525 30 96.7 30 .............................C AACCGCTTTTTGAAACAAACTAATCTTCCG 15465 30 96.7 30 .............................A TGCCGATTTCGCTTGATGAGCTTGCGGAAG 15405 30 96.7 30 .............................G AAACGTCTGGGCGAAGTGAATTGCTAACAG 15345 30 93.3 30 ............................AG TCAATGGAAGAGAGAGGTGCAGCGTGAAAA 15285 30 96.7 30 .............................G TTTTAACTCGAACCTCACCATCTAAAGGCG 15225 30 93.3 30 ............................AA TTGAAGACCTCAAGCGTATCGTGGAGTCGG 15165 30 96.7 30 ............................A. CCCAATACGAAATCGCACGGAATACGCCTG 15105 30 96.7 30 .............................G TTACAGCCAGCCAGTCTACAGAAGCGGCCC 15045 30 93.3 30 ............................CA GCCATTTTCATAAAACATATTTGAGGCTGG 14985 30 93.3 30 ............................AA AAGGAATCCATTACTTCAGCGATAAAAAAT 14925 30 93.3 30 ............................AA AGGAAGGAATCAGCACCTTTATGTGCATCA 14865 30 96.7 30 ............................C. GAAAGACTAAGCAAAAATCACCAGCGGCAT 14805 30 96.7 30 .............................G TCAGAATTTGAGTTCCAACATTTGGTACAG 14745 30 96.7 31 ............................A. CAAATACTTTGCCTGATGTTGGGATTTTAAT 14684 30 100.0 30 .............................. AAAGTTAATTCCGTTTTGCTCAGTCACCTT 14624 30 96.7 30 .............................A ATGCATTTGAAGTCGATTCTGTAGTTGGTT 14564 30 93.3 30 ............................CA AACGGAATACGATGTTTATTTAGACTTCGT 14504 30 96.7 30 .............................A CTATTGTTGATGATGTAGAAAGTAGTCGTA 14444 30 100.0 30 .............................. TCGTTTAGGCAATAAAAAAGCACCCGGTTG 14384 30 96.7 30 .............................C CTCTTTTGCGATTAGCTCTTGAATTTCATC 14324 30 100.0 30 .............................. CACGCAACCACTGAATATATGCAGTGGAAA 14264 30 96.7 30 ............................A. TGGAATGAAAGGACCAAATTCGGAAAGATG 14204 30 96.7 30 ............................A. GACTAAAGGTTGCAATACGAAAACCGCAAA 14144 30 93.3 30 ............................GA TCTGTTTTTGGCTTAATAAGATCTGTCCAG 14084 30 100.0 30 .............................. TGTGTTCAACGGTATGCCAACTTCGCTCGG 14024 30 93.3 31 ............................AG CTAAAGCTTGGCGAGTTTTATCACCGACCTT 13963 30 93.3 30 ............................AA CTGGAGTAGTCACAATGTCTTGAATGGATT 13903 30 93.3 30 ............................AG TAGCACCAATTTTTACTTTCCCTGAAGCTT 13843 30 96.7 30 ............................A. CGCCTTTTTGAGCTCTTCCTCAGGATCCTC 13783 30 93.3 30 ............................AA TTAGAAAGGCTATCTGTGAACATTATATTA 13723 30 93.3 30 ............................AA ACGCATAAGGGGGCTCTAACATGGCTTTGA 13663 30 93.3 30 ............................GC CAATCCAACTGAATGCCCTTGACCAGGTGG 13603 30 93.3 30 ............................GA TACGATCAAGCAGCAATTTGTAGGCTGGAA 13543 30 93.3 30 ............................AC ACGAAGATCATGTTTTACCATTGAAGCTAC 13483 30 96.7 30 ............................G. AAAGGTGGCCAAGGCAGCTGAGTTGATTCA 13423 30 96.7 30 .............................G CTCAGGAACCCAACAGGAATACCAGACGGC 13363 30 93.3 30 ............................GG CATCAACAAGCTCTTTTATGATGCCTCGTA 13303 30 100.0 30 .............................. CGCCAAGTGGCGAAAGACCGTCTTTCTGAC 13243 30 93.3 30 ............................AG AAGTTTTTAACGATGAAGTTGCAATCGAAC 13183 30 93.3 30 ............................AG CAGTCAGGACGAGCAATTGGCCTATTGCAG 13123 30 96.7 30 .............................G CTATTTTCAGTAAGAAAAATGATGGCATGT 13063 30 96.7 30 ............................A. TGAAAAGCAGTATGGCAAAGATGCTGTATC 13003 30 96.7 30 .............................G AGAAAAGGATGCACAGCATTAAGCTAATTG 12943 30 100.0 30 .............................. TTAAGAATGCAAATGCAATGAAGGTGATAA 12883 30 93.3 30 ............................AC CATCTACGATTTTACCAACAATAACTTCAC 12823 30 96.7 30 ............................A. ATCTAAATCACAGAAACGACTATATTGAAG 12763 30 93.3 30 ............................AA CAGATTCCTGTTTGCTTGACCCTCACAGTA 12703 30 93.3 30 ............................AC AGCAACAAATTCATAATTTGAAGTCATAAA 12643 30 93.3 30 ............................AC CGCATTGATAAACCATCGAATCCGAGGGAA 12583 30 100.0 30 .............................. TAAATTGAATAGCGCAATTACCATTAGTGA 12523 30 100.0 30 .............................. ATACACCCAACAAGGCATAAACATGCTGAA 12463 30 93.3 30 ............................AC CAACAACAAGAATATTTTTTCGTTCTTTTA 12403 30 93.3 30 ............................CA TTTCTACTCCCGATTATTTCAAAGTTAAAA 12343 30 93.3 30 ............................CA TTTCTACTCCCGATTATTTCAAAGTTAAAA 12283 30 93.3 30 ............................GA CTTCTTGTGCAATTTGATCTTTCGTATTTT 12223 30 100.0 30 .............................. ATTGATTCAATGTAAAGAACAGGTCTACAG 12163 30 93.3 30 ............................AA AAAGATCAGTATTATCTGTCACAGGCTGCA 12103 30 93.3 30 ............................AC AAAAAATAATTACCGAGTTCAGCTTTAGCC 12043 30 93.3 30 ..................T..........C TTGCCCCTGTGTGCTTTGATTTGGAAGTGT 11983 30 90.0 30 ...T........................AG CCCCGCACAAGATTACATAGACAAAGTGCT 11923 30 100.0 30 .............................. CAACAGGTACGGGTTCAGGTACTGGTGATC 11863 30 93.3 30 ............................AG TCGTTAGACGAATATGCGTCTTGTTTAGAA 11803 30 96.7 30 .............................C AAGGCGATCCACCTCCCGTCACAGTCATTT 11743 30 93.3 30 ...........T.C................ TGCTAAAACGATTTATGCTTTAAAATACTT 11683 30 86.7 30 .......A.....C...T..........G. TGGCGTACGGATAACGGAAGAAAGCATAAG 11623 30 86.7 30 .......A.........T..........AA ATAACCACGGTTGTGGTAAGTCACTTTTAC 11563 30 80.0 30 .......A.A.....T.T..........GC GTTCAGGTTGAGGAGATGAAGTGATGTGAT 11503 30 70.0 0 ...T...A...T.....T..C...AGCG.. | ========== ====== ====== ====== ============================== =============================== ================== 81 30 94.7 30 GTTCATGGCGGCATACGCCATTTAGAAATT # Left flank : GCAAATGGCTAGAACGATTCATTGATTATGTACATATCACTCAACCGAGAGAAGTGCCTCGAGCCAAGATTACAGGTTATGCGCATTACTATCGAGTTAATCCTAGAATGAGTGTTGAGGAACGTATAGTTCATCAAGCACAACGTCGTAATATTTCTTTGGATCAGGCTAGACAGCATTTTAAACAATATGTTGAGCAACCAGTGGTTGAACCATACGTAAGTTTAAAAAGTCTCAGTGCAAAACGTGAGGAAAATGTAGATCGCCTCTATCGTTTATATATTGGTAAATCACTTGTTGATGAGGCAAGGGATGGGATGTTTGGAACTTATGGACTAAGCCGAATGACAACAGTCCCAGAGTTTTGACCCAATATTTTTTCTATTCTTTGAAAGTTCAATAAAATCAATAAGTTATAATGTGTCTTTTTTTGATTGGGTAAAATTCCAAAATCCATGATAAACACTTGTTGTAACTTATATTTTTACTATAATTTTATT # Right flank : AAGATAAAAAAACAAATGATCACTGCTTAGTATTCTTTATCTTTAAATTTTAAAGAAGAAAATATATTCTGAGCTCAAGATATTTAGTGGTGAAATTTTTATGCGCGGTTTATACCTCATTACCAATGATGACCCAATCCAATTATTATTAGAAAAATTAGACGCCGCACTCGCAACCCGTCAAATCGCAATTTTACAGTACCGCCGTAAAAAAGTAGACAAAGCCGAACAGCCTGCTGAAGTTGAACAGATTAAACAGTTATGTGAAAAATATCAGGTTCCTTTTGTCATTAATGATGACCTAAAACTGGCTGCTCAGTTTGGTTTAGGTGTGCATTTAGGCCAAAGTGACGGTGAAATTACCGATGCAAAATCGCAGTTACCAGAAGGTGTCATTATTGGCCGTACTTGCTTAAACTCTTTAGAGCTTGCTCAAAAAGCAATTGCCGATGGCGCAACTTATGTTGCCTTTGGTGCGGTTTATGCAACTGCCACTAAAC # Questionable array : NO Score: 5.19 # Score Detail : 1:0, 2:3, 3:0, 4:0.74, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.19, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCATGGCGGCATACGCCATTTAGAAATT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: R [matched GTTCATGGCGGCATACGCCATTTAGAAATT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-6.60,-8.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [22-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [80.0-81.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //